==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=9-AUG-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 10-NOV-11 3ULC . COMPND 2 MOLECULE: TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT AVO1; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR D.PAN,Y.MATSUURA . 100 3 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8401.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 61.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 26 26.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 13.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 18.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1065 A A 0 0 147 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 141.5 21.9 32.1 -30.5 2 1066 A Y + 0 0 195 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.866 360.0 162.5-146.9 107.1 25.1 30.4 -29.3 3 1067 A H - 0 0 136 -2,-0.4 2,-0.4 2,-0.0 0, 0.0 -0.970 15.4-162.0-123.9 142.8 26.7 29.4 -25.9 4 1068 A K - 0 0 70 -2,-0.4 2,-0.3 2,-0.0 -2,-0.0 -0.897 8.9-167.9-120.3 140.4 29.5 27.0 -25.3 5 1069 A Y - 0 0 175 -2,-0.4 2,-0.6 2,-0.0 -2,-0.0 -0.989 24.9-122.7-135.2 144.2 30.3 25.4 -21.9 6 1070 A K + 0 0 128 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.723 49.5 161.6 -84.1 124.3 33.2 23.5 -20.5 7 1071 A V - 0 0 112 -2,-0.6 2,-0.5 2,-0.0 -2,-0.0 -0.914 35.4-127.9-139.3 168.5 31.8 20.1 -19.3 8 1072 A W - 0 0 200 -2,-0.3 2,-0.4 2,-0.0 -2,-0.0 -0.970 14.9-138.7-119.1 131.1 32.8 16.6 -18.4 9 1073 A R - 0 0 203 -2,-0.5 2,-0.6 2,-0.0 -2,-0.0 -0.729 21.6-143.7 -77.8 129.1 31.3 13.5 -19.8 10 1074 A R + 0 0 236 -2,-0.4 2,-0.4 2,-0.0 -2,-0.0 -0.895 25.7 176.3 -93.6 121.8 30.9 11.0 -16.9 11 1075 A Q - 0 0 147 -2,-0.6 2,-0.2 0, 0.0 3,-0.0 -0.993 21.3-140.9-134.6 126.9 31.5 7.4 -18.0 12 1076 A Q - 0 0 181 -2,-0.4 2,-0.2 1,-0.1 -2,-0.0 -0.525 30.1-105.0 -81.7 150.5 31.6 4.3 -15.9 13 1077 A M - 0 0 176 -2,-0.2 -1,-0.1 1,-0.1 0, 0.0 -0.528 27.5-156.8 -70.2 138.0 34.2 1.6 -16.5 14 1078 A S + 0 0 107 -2,-0.2 -1,-0.1 2,-0.1 2,-0.1 0.569 48.9 117.8 -98.4 -4.4 32.5 -1.4 -18.3 15 1079 A F - 0 0 158 1,-0.1 2,-0.6 0, 0.0 -2,-0.1 -0.335 52.7-144.9 -71.6 143.3 34.8 -4.2 -17.4 16 1080 A I - 0 0 121 -2,-0.1 2,-0.2 2,-0.0 -1,-0.1 -0.915 11.3-157.6-110.9 120.2 33.4 -7.0 -15.3 17 1081 A N - 0 0 106 -2,-0.6 2,-0.4 2,-0.0 0, 0.0 -0.482 3.2-149.5 -88.9 163.7 35.7 -8.7 -12.9 18 1082 A K - 0 0 139 -2,-0.2 2,-0.5 59,-0.0 59,-0.1 -0.971 8.0-168.0-141.8 117.2 35.2 -12.2 -11.5 19 1083 A H - 0 0 139 -2,-0.4 -2,-0.0 15,-0.0 0, 0.0 -0.936 26.6-120.1-115.3 119.8 36.3 -13.3 -8.0 20 1084 A E + 0 0 154 -2,-0.5 2,-0.3 14,-0.0 -2,-0.0 -0.225 41.4 161.1 -62.7 140.8 36.3 -16.9 -7.2 21 1085 A R - 0 0 87 13,-0.2 2,-0.5 2,-0.0 11,-0.0 -0.913 38.8-116.3-142.5 171.9 34.1 -18.1 -4.4 22 1086 A T E -A 33 0A 66 11,-3.9 11,-2.8 -2,-0.3 2,-0.6 -0.961 23.4-160.1-111.6 128.9 32.7 -21.3 -3.1 23 1087 A L E -A 32 0A 41 -2,-0.5 2,-0.4 9,-0.2 9,-0.2 -0.970 15.2-176.5-111.2 118.5 28.9 -21.5 -3.1 24 1088 A A E -A 31 0A 39 7,-2.9 7,-3.3 -2,-0.6 2,-0.6 -0.969 19.9-152.3-124.9 135.5 27.6 -24.1 -0.8 25 1089 A I E +A 30 0A 55 -2,-0.4 2,-0.5 5,-0.2 5,-0.2 -0.938 19.0 176.3-110.9 116.4 24.1 -25.2 -0.3 26 1090 A D E > -A 29 0A 97 3,-3.3 3,-2.5 -2,-0.6 2,-0.4 -0.896 60.3 -63.2-132.0 96.0 23.7 -26.6 3.2 27 1091 A G T 3 S- 0 0 54 -2,-0.5 68,-0.0 1,-0.3 0, 0.0 -0.497 120.9 -16.0 54.8-113.9 20.1 -27.6 4.1 28 1092 A D T 3 S+ 0 0 62 -2,-0.4 18,-2.5 -3,-0.1 2,-0.4 0.283 123.5 90.6-101.1 9.4 18.3 -24.3 3.9 29 1093 A Y E < -AB 26 45A 99 -3,-2.5 -3,-3.3 16,-0.2 2,-0.5 -0.843 56.9-158.8-107.7 144.6 21.4 -22.2 4.0 30 1094 A I E -AB 25 44A 0 14,-3.3 14,-3.4 -2,-0.4 2,-0.5 -0.974 13.4-162.4-114.6 129.6 23.6 -20.9 1.1 31 1095 A Y E -AB 24 43A 67 -7,-3.3 -7,-2.9 -2,-0.5 2,-0.6 -0.962 14.4-162.7-119.7 136.6 27.1 -20.0 1.9 32 1096 A I E +AB 23 42A 6 10,-2.4 10,-2.7 -2,-0.5 -9,-0.2 -0.964 27.7 168.3-114.4 107.9 29.4 -17.8 -0.2 33 1097 A V E -A 22 0A 39 -11,-2.8 -11,-3.9 -2,-0.6 8,-0.1 -0.938 34.6-121.6-125.9 137.3 32.8 -18.6 1.2 34 1098 A P - 0 0 31 0, 0.0 -13,-0.2 0, 0.0 2,-0.1 -0.527 30.9-124.3 -76.2 153.4 36.1 -17.7 -0.4 35 1099 A P 0 0 62 0, 0.0 -13,-0.0 0, 0.0 -15,-0.0 -0.391 360.0 360.0 -81.8 173.4 38.4 -20.6 -1.2 36 1100 A E 0 0 156 -2,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.474 360.0 360.0-124.2 360.0 42.0 -21.0 0.0 37 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 38 1108 A N 0 0 212 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -34.1 40.2 -12.1 4.1 39 1109 A V - 0 0 63 1,-0.1 2,-0.3 -6,-0.0 0, 0.0 -0.371 360.0-125.4 -61.8 141.4 36.7 -12.0 2.6 40 1110 A K - 0 0 129 -7,-0.1 2,-0.1 1,-0.1 -1,-0.1 -0.690 28.0 -98.5 -92.4 151.1 34.1 -13.0 5.3 41 1111 A T - 0 0 69 -2,-0.3 2,-0.5 -8,-0.1 -8,-0.2 -0.459 30.5-140.4 -68.1 137.3 31.6 -15.8 4.6 42 1112 A K E -B 32 0A 80 -10,-2.7 -10,-2.4 -2,-0.1 2,-0.6 -0.900 15.2-162.9-100.2 128.0 28.1 -14.7 3.5 43 1113 A S E -B 31 0A 69 -2,-0.5 2,-0.4 -12,-0.2 -12,-0.2 -0.946 9.5-178.7-117.9 110.3 25.3 -16.8 5.0 44 1114 A L E -B 30 0A 10 -14,-3.4 -14,-3.3 -2,-0.6 2,-0.4 -0.940 17.9-146.0-112.3 139.3 21.9 -16.7 3.4 45 1115 A H E > -B 29 0A 30 -2,-0.4 3,-3.4 -16,-0.2 4,-0.5 -0.802 29.2-117.7 -93.4 142.9 18.8 -18.4 4.5 46 1116 A I G > S+ 0 0 0 -18,-2.5 3,-1.3 -2,-0.4 -17,-0.1 0.792 114.1 66.4 -50.3 -32.4 16.5 -19.6 1.7 47 1117 A S G 3 S+ 0 0 61 1,-0.2 -1,-0.3 -19,-0.2 20,-0.1 0.622 95.9 57.7 -63.1 -14.8 13.8 -17.2 3.1 48 1118 A Q G < S+ 0 0 64 -3,-3.4 19,-2.9 18,-0.1 2,-0.5 0.669 82.5 97.8 -89.9 -17.0 16.1 -14.3 2.1 49 1119 A V E < +C 66 0B 9 -3,-1.3 17,-0.3 -4,-0.5 3,-0.1 -0.626 40.2 172.6 -80.8 117.8 16.3 -15.2 -1.6 50 1120 A V E + 0 0 72 15,-2.5 2,-0.3 -2,-0.5 16,-0.2 0.741 69.7 12.0 -91.5 -27.8 13.8 -13.2 -3.7 51 1121 A L E +C 65 0B 60 14,-1.5 14,-2.6 2,-0.0 -1,-0.3 -0.995 50.0 174.8-152.0 140.3 15.1 -14.4 -7.1 52 1122 A V E +C 64 0B 8 -2,-0.3 2,-0.4 12,-0.2 12,-0.2 -0.878 22.4 162.6-146.0 120.5 17.3 -17.0 -8.5 53 1123 A K E -C 63 0B 32 10,-1.5 10,-1.5 -2,-0.3 2,-0.4 -0.999 36.2-127.6-146.6 131.9 17.5 -17.2 -12.4 54 1124 A K E -C 62 0B 75 -2,-0.4 8,-0.3 8,-0.2 6,-0.1 -0.686 46.7 -98.7 -77.9 135.2 19.8 -18.8 -15.0 55 1125 A S - 0 0 34 6,-2.6 -1,-0.1 -2,-0.4 6,-0.1 -0.241 18.4-152.5 -57.7 136.5 20.9 -16.2 -17.6 56 1126 A K S S+ 0 0 110 1,-0.1 -1,-0.1 -3,-0.0 -2,-0.0 0.707 97.7 43.2 -77.9 -22.5 19.0 -16.3 -20.9 57 1127 A R S S+ 0 0 226 1,-0.2 -1,-0.1 2,-0.0 -2,-0.0 0.944 119.2 30.2 -86.2 -54.7 22.2 -14.8 -22.6 58 1128 A V > - 0 0 48 1,-0.1 3,-2.2 3,-0.0 -3,-0.3 -0.920 66.5-149.5-118.0 113.8 25.2 -16.8 -21.1 59 1129 A P T 3 S+ 0 0 67 0, 0.0 -1,-0.1 0, 0.0 22,-0.1 0.763 96.7 52.6 -51.4 -33.5 24.6 -20.4 -20.1 60 1130 A E T 3 S+ 0 0 59 25,-0.1 19,-3.0 20,-0.1 2,-0.3 0.534 95.7 89.5 -81.2 -8.3 27.2 -20.3 -17.2 61 1131 A H E < + D 0 78B 60 -3,-2.2 -6,-2.6 17,-0.2 2,-0.3 -0.664 44.0 152.6 -95.3 146.7 25.8 -17.2 -15.6 62 1132 A F E -CD 54 77B 11 15,-2.0 15,-3.2 -2,-0.3 2,-0.3 -0.936 23.2-145.8-156.6 167.9 23.0 -16.9 -12.9 63 1133 A K E -CD 53 76B 68 -10,-1.5 -10,-1.5 -2,-0.3 2,-0.4 -0.971 3.5-155.3-142.0 154.9 22.1 -14.4 -10.2 64 1134 A I E -CD 52 75B 0 11,-2.2 11,-2.6 -2,-0.3 2,-0.4 -0.992 11.1-158.3-133.0 118.0 20.6 -14.5 -6.7 65 1135 A F E -CD 51 74B 24 -14,-2.6 -15,-2.5 -2,-0.4 -14,-1.5 -0.860 17.7-171.3-102.2 138.1 18.8 -11.5 -5.4 66 1136 A V E -CD 49 73B 2 7,-2.7 7,-2.5 -2,-0.4 2,-0.4 -0.984 23.3-148.6-140.5 135.1 18.5 -11.4 -1.6 67 1137 A R E D 0 72B 135 -19,-2.9 5,-0.1 -2,-0.4 -2,-0.0 -0.885 360.0 360.0-101.0 137.1 16.8 -9.3 1.0 68 1138 A R 0 0 120 3,-0.6 -20,-0.0 -2,-0.4 3,-0.0 -0.567 360.0 360.0-117.6 360.0 18.8 -9.0 4.3 69 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 70 1142 A D 0 0 149 0, 0.0 2,-0.5 0, 0.0 -3,-0.0 0.000 360.0 360.0 360.0 -8.0 14.8 -1.2 1.2 71 1143 A D - 0 0 79 -3,-0.0 -3,-0.6 2,-0.0 2,-0.5 -0.960 360.0-165.9-120.8 113.6 18.1 -2.5 -0.2 72 1144 A I E -D 67 0B 44 -2,-0.5 2,-0.4 -5,-0.1 -5,-0.2 -0.855 19.1-135.9 -88.6 129.8 18.1 -5.8 -2.1 73 1145 A K E -D 66 0B 53 -7,-2.5 -7,-2.7 -2,-0.5 2,-0.6 -0.729 14.3-152.5 -81.7 134.7 21.6 -7.3 -2.6 74 1146 A R E -D 65 0B 140 -2,-0.4 2,-0.7 -9,-0.2 -9,-0.2 -0.925 10.0-169.8-112.0 108.2 22.1 -8.5 -6.2 75 1147 A Y E -D 64 0B 53 -11,-2.6 -11,-2.2 -2,-0.6 2,-0.4 -0.850 1.2-168.7 -99.5 109.3 24.7 -11.3 -6.5 76 1148 A Y E +D 63 0B 154 -2,-0.7 2,-0.3 -13,-0.2 -13,-0.2 -0.815 14.3 179.5 -95.4 139.5 25.7 -12.2 -10.0 77 1149 A F E -D 62 0B 40 -15,-3.2 -15,-2.0 -2,-0.4 2,-0.4 -0.859 26.6-143.5-134.6 165.0 27.7 -15.4 -10.4 78 1150 A E E -D 61 0B 82 -2,-0.3 -17,-0.2 -17,-0.2 2,-0.1 -0.997 21.6-146.7-129.3 126.9 29.3 -17.7 -13.0 79 1151 A A - 0 0 9 -19,-3.0 3,-0.1 -2,-0.4 -19,-0.1 -0.334 31.5-103.8 -84.5 169.3 29.3 -21.4 -12.6 80 1152 A V S S- 0 0 116 1,-0.1 2,-0.3 -2,-0.1 -20,-0.1 0.796 99.9 -6.6 -67.0 -21.9 32.1 -23.7 -13.7 81 1153 A S S > S- 0 0 44 -21,-0.1 4,-2.6 -22,-0.1 -1,-0.1 -0.975 74.7 -98.7-164.9 163.5 29.9 -24.7 -16.6 82 1154 A G H > S+ 0 0 21 -2,-0.3 4,-2.1 2,-0.2 5,-0.1 0.886 122.6 51.3 -61.3 -37.8 26.4 -24.4 -18.1 83 1155 A Q H > S+ 0 0 77 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.913 110.9 47.3 -67.5 -42.5 25.4 -27.7 -16.7 84 1156 A E H > S+ 0 0 89 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.917 108.5 56.5 -63.2 -39.1 26.6 -26.8 -13.2 85 1157 A C H X S+ 0 0 0 -4,-2.6 4,-2.7 1,-0.2 5,-0.2 0.929 107.4 48.0 -54.3 -46.7 24.8 -23.5 -13.6 86 1158 A T H X S+ 0 0 61 -4,-2.1 4,-2.9 1,-0.2 -1,-0.2 0.888 111.4 51.2 -63.9 -38.8 21.5 -25.3 -14.3 87 1159 A E H X S+ 0 0 103 -4,-2.0 4,-2.6 2,-0.2 -1,-0.2 0.891 111.6 45.8 -65.8 -42.9 22.1 -27.6 -11.3 88 1160 A I H X S+ 0 0 26 -4,-2.5 4,-2.2 2,-0.2 -2,-0.2 0.924 116.2 45.1 -65.8 -45.4 22.8 -24.7 -8.9 89 1161 A V H X S+ 0 0 7 -4,-2.7 4,-2.9 -5,-0.2 -2,-0.2 0.935 114.5 48.3 -67.4 -45.5 19.8 -22.7 -10.1 90 1162 A T H X S+ 0 0 61 -4,-2.9 4,-2.9 -5,-0.2 5,-0.2 0.950 112.1 50.1 -55.4 -54.2 17.5 -25.8 -10.1 91 1163 A R H X S+ 0 0 135 -4,-2.6 4,-2.1 1,-0.2 -1,-0.2 0.880 114.3 43.6 -51.4 -47.9 18.6 -26.7 -6.5 92 1164 A L H X S+ 0 0 1 -4,-2.2 4,-1.8 2,-0.2 -1,-0.2 0.860 112.2 51.7 -71.2 -36.7 18.0 -23.2 -5.2 93 1165 A Q H X S+ 0 0 89 -4,-2.9 4,-2.7 2,-0.2 -2,-0.2 0.907 112.1 48.6 -64.5 -39.4 14.7 -22.9 -7.0 94 1166 A N H X S+ 0 0 96 -4,-2.9 4,-2.7 2,-0.2 -2,-0.2 0.861 110.4 50.0 -64.0 -42.4 13.6 -26.3 -5.4 95 1167 A L H X S+ 0 0 37 -4,-2.1 4,-2.3 -5,-0.2 -1,-0.2 0.851 112.5 48.2 -64.0 -34.8 14.8 -25.2 -2.0 96 1168 A L H X S+ 0 0 44 -4,-1.8 4,-2.7 2,-0.2 -2,-0.2 0.948 112.0 47.7 -74.0 -45.2 12.8 -22.0 -2.4 97 1169 A S H X S+ 0 0 55 -4,-2.7 4,-2.0 2,-0.2 -2,-0.2 0.963 113.8 49.1 -52.1 -55.4 9.7 -23.8 -3.6 98 1170 A A H X S+ 0 0 52 -4,-2.7 4,-0.5 1,-0.2 3,-0.3 0.933 115.2 42.9 -53.9 -49.4 10.0 -26.3 -0.7 99 1171 A Y H >< S+ 0 0 91 -4,-2.3 3,-1.0 1,-0.2 -1,-0.2 0.872 112.4 52.1 -64.1 -38.7 10.4 -23.5 1.9 100 1172 A R H 3< S+ 0 0 70 -4,-2.7 -1,-0.2 1,-0.3 -2,-0.2 0.763 90.4 77.4 -77.7 -23.7 7.7 -21.3 0.5 101 1173 A M H 3< 0 0 152 -4,-2.0 -1,-0.3 -3,-0.3 -2,-0.2 0.801 360.0 360.0 -47.6 -34.0 5.2 -24.2 0.5 102 1174 A N << 0 0 173 -3,-1.0 -1,-0.2 -4,-0.5 -4,-0.0 -0.438 360.0 360.0 -82.4 360.0 4.9 -23.5 4.4