==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PHOTOSYNTHESIS 09-MAY-07 2V07 . COMPND 2 MOLECULE: CYTOCHROME C6; . SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; . AUTHOR J.A.R.WORRALL,B.G.SCHLARB-RIDLEY,T.REDA,M.J.MARCAIDA, . 98 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6174.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 63.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 12.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 37 37.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 4 A D > 0 0 131 0, 0.0 4,-2.3 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 104.7 12.2 -5.1 9.0 2 5 A I H > + 0 0 80 1,-0.2 4,-2.8 2,-0.2 5,-0.2 0.865 360.0 54.4 -63.6 -39.2 13.9 -5.4 12.4 3 6 A Q H > S+ 0 0 66 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.893 112.3 44.4 -58.9 -42.1 10.6 -5.4 14.3 4 7 A R H > S+ 0 0 124 2,-0.2 4,-2.0 1,-0.2 -2,-0.2 0.843 113.5 50.2 -70.9 -38.5 9.3 -8.3 12.1 5 8 A G H X S+ 0 0 0 -4,-2.3 4,-2.5 2,-0.2 -2,-0.2 0.875 109.9 50.4 -68.6 -39.7 12.6 -10.2 12.5 6 9 A A H X S+ 0 0 24 -4,-2.8 4,-2.4 2,-0.2 -2,-0.2 0.918 110.4 50.1 -63.0 -44.8 12.6 -9.8 16.3 7 10 A T H X S+ 0 0 96 -4,-1.8 4,-1.3 -5,-0.2 -2,-0.2 0.919 114.2 43.4 -60.4 -45.8 9.0 -11.1 16.5 8 11 A L H X S+ 0 0 13 -4,-2.0 4,-2.3 1,-0.2 5,-0.3 0.888 114.4 49.9 -68.6 -40.1 9.8 -14.1 14.4 9 12 A F H X>S+ 0 0 4 -4,-2.5 4,-2.2 1,-0.2 5,-2.0 0.897 105.6 58.5 -62.8 -40.3 13.1 -14.8 16.2 10 13 A N H <5S+ 0 0 114 -4,-2.4 5,-0.3 1,-0.2 -1,-0.2 0.880 116.3 32.5 -61.0 -37.7 11.3 -14.6 19.5 11 14 A R H <5S+ 0 0 173 -4,-1.3 -1,-0.2 -5,-0.1 -2,-0.2 0.741 128.5 33.6 -91.8 -27.6 8.9 -17.4 18.7 12 15 A A H <5S+ 0 0 28 -4,-2.3 -3,-0.2 -5,-0.1 -2,-0.2 0.614 134.3 12.5-103.9 -14.4 11.0 -19.7 16.4 13 16 A C T >X5S+ 0 0 25 -4,-2.2 4,-2.6 -5,-0.3 3,-1.0 0.639 98.3 84.0-132.2 -32.0 14.5 -19.3 17.9 14 17 A I T 34< S- 0 0 27 -4,-2.6 3,-2.4 5,-0.2 -2,-0.2 -0.379 81.3-172.2-108.6 56.6 19.1 -18.9 21.5 18 21 A D G > S- 0 0 78 -2,-0.4 3,-1.7 1,-0.3 4,-0.1 -0.243 72.7 -19.3 -64.3 118.8 18.0 -16.8 24.4 19 22 A T G 3 S- 0 0 96 1,-0.3 -1,-0.3 2,-0.1 3,-0.1 0.775 135.0 -45.6 49.7 36.8 19.3 -13.2 23.9 20 23 A G G < S+ 0 0 0 -3,-2.4 10,-2.7 1,-0.1 11,-0.4 0.479 118.5 108.2 93.8 3.7 21.8 -14.5 21.5 21 24 A G < - 0 0 10 -3,-1.7 9,-0.2 8,-0.2 2,-0.2 0.241 65.6-120.6 -92.1-150.4 23.0 -17.5 23.5 22 25 A N - 0 0 35 7,-0.1 -5,-0.2 -5,-0.1 6,-0.1 -0.717 14.4-170.7-162.2 108.6 22.6 -21.2 23.2 23 26 A I S S+ 0 0 100 -7,-2.6 -6,-0.1 -2,-0.2 -7,-0.1 0.579 88.1 41.3 -80.4 -8.3 21.0 -23.1 26.1 24 27 A I S S+ 0 0 79 -8,-0.3 -1,-0.2 1,-0.2 -7,-0.1 0.816 118.3 32.4-103.1 -45.6 21.8 -26.5 24.6 25 28 A Q S > S- 0 0 83 3,-0.1 3,-1.6 31,-0.0 -1,-0.2 -0.913 70.2-145.5-130.4 99.4 25.3 -26.3 23.2 26 29 A P T 3 S+ 0 0 116 0, 0.0 -3,-0.1 0, 0.0 -5,-0.0 -0.318 87.8 32.8 -59.7 147.0 28.0 -24.1 24.8 27 30 A G T 3 S+ 0 0 30 -5,-0.1 10,-0.1 1,-0.0 11,-0.1 0.255 100.7 84.4 88.9 -11.4 30.3 -22.6 22.2 28 31 A A < + 0 0 32 -3,-1.6 -3,-0.1 -6,-0.1 -4,-0.1 -0.250 58.7 137.9-119.5 46.1 27.7 -22.3 19.6 29 32 A T - 0 0 23 -7,-0.1 -8,-0.2 1,-0.1 -7,-0.1 -0.175 65.6-111.9 -77.6 176.8 26.0 -19.0 20.5 30 33 A L S S+ 0 0 20 -10,-2.7 2,-0.2 -9,-0.2 -9,-0.2 0.209 79.1 118.6 -93.1 9.9 24.9 -16.3 18.1 31 34 A F S >> S- 0 0 88 -11,-0.4 4,-2.4 1,-0.1 3,-0.8 -0.548 78.8-112.3 -73.2 147.9 27.5 -13.9 19.4 32 35 A T H 3> S+ 0 0 43 60,-0.4 4,-2.9 1,-0.2 5,-0.2 0.838 113.2 54.9 -49.2 -45.4 30.1 -12.8 16.8 33 36 A K H 3> S+ 0 0 160 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.880 112.9 42.1 -59.7 -41.8 33.1 -14.7 18.4 34 37 A D H <> S+ 0 0 20 -3,-0.8 4,-2.0 2,-0.2 -1,-0.2 0.878 113.5 51.0 -73.6 -42.6 31.3 -18.0 18.3 35 38 A L H <>S+ 0 0 9 -4,-2.4 5,-2.7 1,-0.2 6,-0.5 0.941 113.0 48.1 -57.1 -44.8 29.8 -17.5 14.8 36 39 A E H ><5S+ 0 0 117 -4,-2.9 3,-1.2 -5,-0.3 -2,-0.2 0.900 110.2 49.8 -63.7 -43.9 33.3 -16.6 13.6 37 40 A R H 3<5S+ 0 0 135 -4,-1.9 -1,-0.2 1,-0.3 -2,-0.2 0.824 112.3 48.9 -67.1 -29.7 35.0 -19.6 15.3 38 41 A N T 3<5S- 0 0 85 -4,-2.0 -1,-0.3 -5,-0.1 -2,-0.2 0.371 115.3-114.7 -92.6 7.0 32.4 -21.9 13.7 39 42 A G T < 5S+ 0 0 48 -3,-1.2 -3,-0.2 -4,-0.3 -2,-0.1 0.730 89.4 101.7 73.4 26.9 32.8 -20.4 10.3 40 43 A V < + 0 0 18 -5,-2.7 2,-1.2 -6,-0.2 -4,-0.2 0.077 27.2 124.2-135.4 25.6 29.3 -19.0 10.1 41 44 A D + 0 0 32 -6,-0.5 2,-0.3 -5,-0.1 -5,-0.1 -0.219 59.0 86.3 -84.9 47.7 29.5 -15.2 10.7 42 45 A T S > S- 0 0 52 -2,-1.2 4,-3.1 1,-0.1 5,-0.3 -0.989 83.9-120.7-140.7 151.2 27.8 -14.3 7.5 43 46 A E H > S+ 0 0 65 -2,-0.3 4,-2.8 1,-0.2 5,-0.2 0.899 115.3 52.7 -55.3 -39.6 24.2 -13.9 6.4 44 47 A E H > S+ 0 0 144 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.888 112.9 42.7 -68.2 -37.1 24.7 -16.6 3.8 45 48 A E H > S+ 0 0 56 2,-0.2 4,-2.4 1,-0.2 5,-0.2 0.872 114.0 50.8 -75.3 -38.6 26.1 -19.1 6.3 46 49 A I H X S+ 0 0 13 -4,-3.1 4,-2.3 2,-0.2 5,-0.2 0.924 111.9 49.0 -62.4 -43.3 23.5 -18.2 9.0 47 50 A Y H X S+ 0 0 50 -4,-2.8 4,-2.6 -5,-0.3 -2,-0.2 0.959 110.9 49.7 -60.9 -47.6 20.8 -18.7 6.3 48 51 A R H X S+ 0 0 130 -4,-2.0 4,-2.8 1,-0.2 5,-0.4 0.920 112.3 46.3 -62.4 -43.7 22.2 -22.1 5.3 49 52 A Q H X S+ 0 0 55 -4,-2.4 4,-2.4 1,-0.2 -1,-0.2 0.909 113.4 49.3 -68.1 -36.7 22.5 -23.5 8.8 50 53 A T H < S+ 0 0 21 -4,-2.3 10,-2.9 -5,-0.2 11,-0.3 0.880 114.8 46.7 -65.4 -36.7 19.0 -22.3 9.7 51 54 A Y H < S+ 0 0 16 -4,-2.6 10,-2.5 8,-0.2 -2,-0.2 0.945 130.0 17.8 -71.4 -49.9 17.7 -23.9 6.5 52 55 A F H < S- 0 0 85 -4,-2.8 7,-0.5 7,-0.2 -3,-0.2 0.634 97.4-142.8-102.1 -18.8 19.4 -27.3 6.7 53 56 A G < - 0 0 18 -4,-2.4 2,-0.3 -5,-0.4 -1,-0.1 -0.059 3.2-131.2 82.3 176.6 20.4 -27.5 10.4 54 57 A K B > -A 57 0A 145 3,-2.2 3,-2.7 15,-0.1 -1,-0.1 -0.827 60.5 -36.0-169.0 128.6 23.5 -29.0 12.0 55 58 A G T 3 S- 0 0 82 1,-0.3 -1,-0.1 -2,-0.3 0, 0.0 -0.306 132.4 -10.2 54.1-125.5 23.8 -31.4 14.9 56 59 A R T 3 S+ 0 0 158 -3,-0.1 -1,-0.3 2,-0.1 -3,-0.0 0.391 113.3 100.8 -87.5 4.5 21.0 -30.6 17.4 57 60 A M B < S-A 54 0A 39 -3,-2.7 -3,-2.2 14,-0.0 2,-0.1 -0.809 75.9-135.7 -84.2 111.6 20.2 -27.3 15.5 58 61 A P - 0 0 50 0, 0.0 -5,-0.3 0, 0.0 2,-0.3 -0.401 10.8-119.2 -69.0 150.4 17.1 -28.3 13.5 59 62 A G B -b 70 0B 0 10,-1.9 12,-3.1 -7,-0.5 -8,-0.2 -0.709 24.5-173.8 -83.5 142.6 16.8 -27.4 9.9 60 63 A F + 0 0 31 -10,-2.9 16,-2.6 -2,-0.3 -9,-0.2 0.429 40.9 119.2-113.2 -6.2 13.8 -25.2 9.2 61 64 A G B > S-c 76 0C 0 -10,-2.5 3,-1.7 -11,-0.3 16,-0.1 -0.327 70.2-122.2 -70.6 152.5 13.9 -24.9 5.4 62 65 A E T 3 S+ 0 0 85 14,-0.5 -1,-0.1 1,-0.3 13,-0.1 0.855 115.0 38.4 -60.8 -37.7 11.0 -26.2 3.2 63 66 A K T 3 S+ 0 0 162 2,-0.1 -1,-0.3 3,-0.0 -2,-0.1 0.169 82.1 139.1-101.3 17.4 13.4 -28.6 1.3 64 67 A a < - 0 0 6 -3,-1.7 6,-0.1 -13,-0.1 -12,-0.1 -0.384 46.4-135.0 -58.6 137.8 15.4 -29.5 4.4 65 68 A T + 0 0 99 1,-0.1 2,-0.1 -13,-0.1 -2,-0.1 -0.978 66.1 35.6-163.1 145.7 16.0 -33.3 4.1 66 69 A P S > S- 0 0 82 0, 0.0 3,-2.3 0, 0.0 4,-0.4 0.603 77.2-125.7 -74.9 162.3 16.0 -35.9 5.4 67 70 A R G > S+ 0 0 166 1,-0.3 3,-1.3 2,-0.2 -2,-0.0 0.776 104.0 63.4 -41.8 -40.5 13.0 -35.5 7.8 68 71 A G G 3 S+ 0 0 64 1,-0.2 -1,-0.3 -10,-0.0 4,-0.1 0.733 99.6 51.3 -63.5 -25.4 15.0 -36.4 10.9 69 72 A Q G < S+ 0 0 89 -3,-2.3 -10,-1.9 -11,-0.1 -1,-0.2 0.487 103.9 75.2 -90.1 -1.5 17.5 -33.5 10.6 70 73 A a B < S-b 59 0B 6 -3,-1.3 -10,-0.2 -4,-0.4 -18,-0.1 -0.690 94.6 -81.7-111.9 160.0 14.6 -30.9 10.3 71 74 A T - 0 0 27 -12,-3.1 -1,-0.1 -2,-0.2 -2,-0.1 -0.223 26.0-145.8 -50.7 141.0 12.1 -29.3 12.7 72 75 A F S S+ 0 0 148 -4,-0.1 -1,-0.2 2,-0.1 3,-0.1 0.484 84.4 76.7 -87.3 -5.0 9.0 -31.5 13.4 73 76 A G S S- 0 0 37 1,-0.2 2,-0.1 0, 0.0 -3,-0.0 -0.206 108.3 -53.8 -80.1-170.7 7.1 -28.3 13.6 74 77 A P - 0 0 117 0, 0.0 -1,-0.2 0, 0.0 2,-0.1 -0.365 58.4-117.3 -66.8 144.4 6.1 -26.3 10.5 75 78 A R - 0 0 59 -3,-0.1 2,-0.3 -13,-0.1 -14,-0.2 -0.409 28.2-118.6 -71.7 156.1 8.9 -25.3 8.1 76 79 A L B -c 61 0C 10 -16,-2.6 -14,-0.5 -2,-0.1 2,-0.1 -0.762 25.8-112.4 -94.2 144.1 9.7 -21.6 7.5 77 80 A Q >> - 0 0 111 -2,-0.3 4,-2.0 -16,-0.1 3,-0.7 -0.381 30.9-108.0 -66.4 153.8 9.3 -20.0 4.1 78 81 A D H 3> S+ 0 0 85 1,-0.2 4,-2.6 2,-0.2 5,-0.2 0.884 120.6 54.3 -48.8 -43.6 12.5 -18.8 2.4 79 82 A E H 3> S+ 0 0 135 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.874 107.5 50.6 -64.4 -34.4 11.6 -15.1 3.1 80 83 A E H <> S+ 0 0 44 -3,-0.7 4,-2.3 2,-0.2 -1,-0.2 0.906 110.8 47.9 -67.6 -41.2 11.2 -15.9 6.8 81 84 A I H X S+ 0 0 0 -4,-2.0 4,-2.8 2,-0.2 -2,-0.2 0.896 110.6 52.1 -70.2 -38.2 14.6 -17.5 6.9 82 85 A K H X S+ 0 0 103 -4,-2.6 4,-2.5 -5,-0.2 5,-0.2 0.946 110.5 48.0 -59.8 -48.5 16.2 -14.6 5.0 83 86 A L H X S+ 0 0 18 -4,-2.3 4,-2.5 1,-0.2 -2,-0.2 0.912 113.3 48.4 -55.7 -45.8 14.6 -12.2 7.6 84 87 A L H X S+ 0 0 3 -4,-2.3 4,-2.9 2,-0.2 -2,-0.2 0.913 110.8 49.8 -63.3 -42.8 15.9 -14.3 10.4 85 88 A A H X S+ 0 0 0 -4,-2.8 4,-2.3 2,-0.2 -2,-0.2 0.920 112.8 46.9 -64.7 -43.7 19.5 -14.5 8.9 86 89 A E H X S+ 0 0 85 -4,-2.5 4,-2.6 2,-0.2 -2,-0.2 0.916 112.8 50.6 -58.8 -44.7 19.6 -10.7 8.5 87 90 A F H X S+ 0 0 12 -4,-2.5 4,-2.9 -5,-0.2 5,-0.2 0.935 110.9 47.4 -63.5 -47.8 18.3 -10.2 12.0 88 91 A V H X S+ 0 0 9 -4,-2.9 4,-2.8 1,-0.2 5,-0.3 0.934 113.2 48.3 -59.9 -45.4 20.9 -12.6 13.6 89 92 A K H X S+ 0 0 53 -4,-2.3 4,-2.4 -5,-0.2 -2,-0.2 0.926 113.5 47.7 -61.3 -43.2 23.7 -10.9 11.6 90 93 A F H X S+ 0 0 88 -4,-2.6 4,-1.5 2,-0.2 -2,-0.2 0.939 114.6 45.5 -62.6 -47.3 22.5 -7.5 12.6 91 94 A Q H X>S+ 0 0 28 -4,-2.9 5,-3.1 2,-0.2 4,-0.7 0.888 112.4 50.5 -64.6 -41.4 22.1 -8.4 16.3 92 95 A A H ><5S+ 0 0 2 -4,-2.8 3,-1.2 1,-0.2 -60,-0.4 0.935 109.6 51.2 -64.3 -44.5 25.5 -10.2 16.4 93 96 A D H 3<5S+ 0 0 89 -4,-2.4 -1,-0.2 -5,-0.3 -2,-0.2 0.847 112.5 47.0 -58.3 -34.0 27.2 -7.1 14.9 94 97 A Q H 3<5S- 0 0 117 -4,-1.5 -1,-0.3 -5,-0.1 -2,-0.2 0.510 118.5-112.7 -85.7 -8.9 25.5 -5.0 17.6 95 98 A G T <<5 - 0 0 44 -3,-1.2 -3,-0.2 -4,-0.7 -2,-0.1 0.714 57.9 -74.0 81.9 25.5 26.5 -7.4 20.4 96 99 A W < - 0 0 18 -5,-3.1 -1,-0.1 -6,-0.1 -4,-0.1 0.963 62.4-145.2 53.1 64.0 23.0 -8.6 21.2 97 100 A P 0 0 75 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 -0.282 360.0 360.0 -57.8 140.6 21.7 -5.4 23.0 98 101 A T 0 0 167 -79,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.902 360.0 360.0-113.2 360.0 19.3 -6.0 25.9