==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=18-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 21-OCT-03 1V31 . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN RAFL11-05-P19; . SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; . AUTHOR M.YONEYAMA,N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA, . 93 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6587.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 44 47.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 11.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 25.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 135 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 133.3 -4.4 -19.4 -18.2 2 2 A S + 0 0 135 1,-0.4 2,-0.4 0, 0.0 0, 0.0 0.451 360.0 31.8-140.1 -58.5 -1.9 -19.2 -15.4 3 3 A S S S+ 0 0 128 2,-0.1 -1,-0.4 0, 0.0 2,-0.2 -0.925 79.7 87.6-115.7 137.9 -2.5 -16.2 -13.2 4 4 A G S S- 0 0 56 -2,-0.4 2,-0.2 -3,-0.1 0, 0.0 -0.826 80.9 -57.7 178.2-137.5 -5.8 -14.5 -12.6 5 5 A S + 0 0 104 -2,-0.2 2,-0.6 4,-0.0 -2,-0.1 -0.649 54.9 161.5-141.7 79.8 -8.7 -14.7 -10.2 6 6 A S - 0 0 122 -2,-0.2 2,-0.2 2,-0.2 -2,-0.1 -0.909 64.0 -41.1-106.6 118.1 -10.3 -18.1 -10.2 7 7 A G S S+ 0 0 78 -2,-0.6 0, 0.0 0, 0.0 0, 0.0 -0.494 121.6 32.5 71.1-132.7 -12.5 -18.9 -7.2 8 8 A V S S- 0 0 123 -2,-0.2 -2,-0.2 1,-0.1 0, 0.0 -0.095 90.3-109.5 -53.5 156.0 -11.1 -17.8 -3.9 9 9 A P - 0 0 89 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 0.099 33.0 -97.3 -75.0-167.2 -9.0 -14.6 -3.9 10 10 A E - 0 0 76 -5,-0.0 2,-0.4 2,-0.0 19,-0.3 -0.973 33.6-172.0-122.7 132.7 -5.3 -14.2 -3.4 11 11 A K - 0 0 105 -2,-0.4 2,-0.4 17,-0.2 17,-0.3 -0.933 5.1-159.3-123.8 146.8 -3.6 -13.4 -0.2 12 12 A F E -A 27 0A 46 15,-3.3 15,-1.5 -2,-0.4 2,-0.3 -0.988 24.6-114.6-129.6 135.9 0.1 -12.6 0.5 13 13 A K E -AB 26 83A 99 70,-3.2 70,-0.9 -2,-0.4 13,-0.2 -0.492 35.4-127.3 -68.5 128.6 2.0 -12.7 3.8 14 14 A L - 0 0 3 11,-1.8 2,-0.1 -2,-0.3 -1,-0.1 -0.401 23.6-111.8 -75.7 154.1 3.1 -9.3 4.9 15 15 A S > - 0 0 26 -2,-0.1 4,-3.1 1,-0.1 5,-0.2 -0.354 26.2-107.1 -82.3 165.6 6.8 -8.6 5.7 16 16 A T H > S+ 0 0 115 2,-0.2 4,-0.9 1,-0.2 -1,-0.1 0.898 124.4 35.3 -57.9 -43.3 8.1 -7.9 9.1 17 17 A A H > S+ 0 0 23 2,-0.2 4,-0.8 1,-0.2 3,-0.4 0.914 117.9 51.0 -76.4 -46.3 8.7 -4.3 8.1 18 18 A L H > S+ 0 0 0 1,-0.3 4,-1.8 2,-0.2 5,-0.4 0.826 110.5 52.0 -59.6 -32.3 5.6 -4.1 5.9 19 19 A M H < S+ 0 0 34 -4,-3.1 -1,-0.3 1,-0.2 -2,-0.2 0.790 107.4 50.7 -73.9 -29.7 3.7 -5.5 8.9 20 20 A D H < S+ 0 0 134 -4,-0.9 -1,-0.2 -3,-0.4 -2,-0.2 0.560 107.8 57.1 -82.8 -10.1 5.1 -2.8 11.1 21 21 A V H < S+ 0 0 3 -4,-0.8 -2,-0.2 -3,-0.2 -1,-0.2 0.921 130.7 4.2 -83.9 -52.1 4.0 -0.3 8.5 22 22 A L S < S- 0 0 46 -4,-1.8 -3,-0.2 -5,-0.1 -2,-0.1 0.880 93.8-122.3 -96.6 -63.5 0.3 -1.2 8.4 23 23 A G + 0 0 62 -5,-0.4 2,-0.1 1,-0.1 -4,-0.1 0.639 64.7 120.2 120.1 35.5 -0.2 -3.8 11.1 24 24 A I - 0 0 43 -6,-0.2 -1,-0.1 1,-0.1 3,-0.1 -0.387 43.0-163.9-112.0-169.4 -1.6 -6.7 9.2 25 25 A E S S+ 0 0 129 -2,-0.1 -11,-1.8 1,-0.1 2,-0.4 0.437 79.2 23.7-144.4 -44.9 -0.5 -10.3 8.6 26 26 A V E S+A 13 0A 58 -13,-0.2 2,-0.2 59,-0.0 -13,-0.2 -0.903 75.5 142.6-138.0 105.7 -2.5 -11.7 5.7 27 27 A E E -A 12 0A 36 -15,-1.5 -15,-3.3 -2,-0.4 2,-0.0 -0.725 43.1-101.7-131.8-179.4 -3.9 -9.4 3.1 28 28 A T - 0 0 12 -17,-0.3 4,-0.4 -2,-0.2 -1,-0.2 -0.009 41.3 -94.3 -89.9-162.5 -4.6 -9.2 -0.6 29 29 A R S > S+ 0 0 121 -19,-0.3 4,-1.9 2,-0.1 5,-0.1 0.894 121.9 32.6 -82.8 -45.5 -2.7 -7.3 -3.3 30 30 A P H > S+ 0 0 78 0, 0.0 4,-4.1 0, 0.0 5,-0.5 0.966 110.0 62.2 -75.0 -57.6 -4.9 -4.2 -3.3 31 31 A R H > S+ 0 0 148 1,-0.2 4,-2.7 2,-0.2 -2,-0.1 0.812 112.6 42.3 -35.5 -41.4 -5.8 -4.1 0.4 32 32 A I H > S+ 0 0 0 -4,-0.4 4,-2.2 2,-0.2 5,-0.3 0.986 112.9 48.3 -71.4 -63.0 -2.1 -3.7 0.9 33 33 A I H X S+ 0 0 15 -4,-1.9 4,-1.3 1,-0.3 -2,-0.2 0.867 120.4 41.5 -43.9 -43.5 -1.4 -1.2 -1.8 34 34 A A H X S+ 0 0 45 -4,-4.1 4,-3.1 2,-0.2 3,-0.3 0.930 105.3 62.0 -70.8 -47.8 -4.3 0.7 -0.5 35 35 A A H X S+ 0 0 29 -4,-2.7 4,-1.9 -5,-0.5 -2,-0.2 0.794 109.5 45.0 -47.5 -30.1 -3.4 0.1 3.1 36 36 A I H X S+ 0 0 0 -4,-2.2 4,-2.9 2,-0.2 -1,-0.3 0.821 108.8 55.2 -82.9 -35.1 -0.3 2.1 2.2 37 37 A W H X S+ 0 0 103 -4,-1.3 4,-2.0 -3,-0.3 -2,-0.2 0.950 116.0 37.8 -61.6 -50.7 -2.3 4.7 0.3 38 38 A H H X S+ 0 0 139 -4,-3.1 4,-4.4 2,-0.2 5,-0.3 0.983 116.9 50.1 -63.6 -60.4 -4.4 5.4 3.4 39 39 A Y H X S+ 0 0 44 -4,-1.9 4,-3.4 -5,-0.3 6,-0.2 0.900 109.1 53.4 -43.0 -54.3 -1.6 5.0 5.9 40 40 A V H <>S+ 0 0 0 -4,-2.9 5,-3.1 1,-0.2 3,-0.3 0.947 116.1 37.5 -46.2 -63.2 0.6 7.4 3.9 41 41 A K H ><5S+ 0 0 100 -4,-2.0 3,-3.3 3,-0.3 -1,-0.2 0.919 112.9 59.0 -55.9 -46.8 -2.1 10.1 3.9 42 42 A A H 3<5S+ 0 0 60 -4,-4.4 -1,-0.2 1,-0.3 -2,-0.2 0.887 109.5 43.8 -48.9 -44.1 -3.0 9.1 7.4 43 43 A R T 3<5S- 0 0 140 -4,-3.4 -1,-0.3 -3,-0.3 -2,-0.2 0.065 118.6-116.1 -89.9 23.7 0.6 9.9 8.3 44 44 A K T < 5S+ 0 0 189 -3,-3.3 -3,-0.3 -5,-0.1 -2,-0.1 0.873 75.9 136.0 41.4 47.0 0.3 13.0 6.2 45 45 A L < + 0 0 10 -5,-3.1 10,-3.3 -6,-0.2 -4,-0.2 0.728 26.8 119.3 -91.3 -27.7 3.0 11.5 4.0 46 46 A Q B -C 54 0B 83 8,-0.3 8,-0.2 -6,-0.2 6,-0.1 0.008 65.9-124.2 -39.0 141.8 1.3 12.4 0.8 47 47 A N - 0 0 15 6,-1.7 6,-0.2 3,-0.5 -1,-0.1 -0.828 14.7-160.7 -99.4 132.6 3.4 14.7 -1.3 48 48 A P S S+ 0 0 112 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.903 92.3 55.5 -75.0 -44.5 2.0 18.0 -2.5 49 49 A N S S+ 0 0 137 1,-0.3 3,-0.0 2,-0.1 -2,-0.0 0.913 124.4 23.5 -53.3 -46.7 4.4 18.5 -5.3 50 50 A D - 0 0 75 3,-0.1 -3,-0.5 1,-0.1 -1,-0.3 -0.981 61.7-165.4-128.7 119.2 3.3 15.1 -6.7 51 51 A P S S+ 0 0 91 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.584 95.8 55.4 -75.0 -10.7 -0.1 13.6 -5.8 52 52 A S S S+ 0 0 58 18,-0.1 19,-2.7 -6,-0.1 20,-0.2 0.737 104.9 60.5 -90.5 -28.4 1.2 10.3 -7.2 53 53 A F E - D 0 70B 34 17,-0.3 -6,-1.7 -3,-0.2 2,-0.3 -0.606 66.3-163.3 -99.5 161.2 4.2 10.3 -4.9 54 54 A F E -CD 46 69B 2 15,-2.1 15,-1.5 -8,-0.2 -8,-0.3 -0.998 20.4-114.2-146.7 143.6 4.3 10.3 -1.1 55 55 A N E - D 0 68B 67 -10,-3.3 2,-0.3 -2,-0.3 13,-0.2 -0.226 35.1-112.6 -70.4 164.2 7.0 11.0 1.5 56 56 A C - 0 0 36 11,-1.2 -1,-0.1 1,-0.1 11,-0.1 -0.721 16.0-161.6-100.4 151.2 8.3 8.2 3.8 57 57 A D - 0 0 64 -2,-0.3 -1,-0.1 0, 0.0 10,-0.0 0.864 56.4 -89.0 -94.9 -50.4 7.7 8.1 7.5 58 58 A A S > S+ 0 0 77 9,-0.0 4,-0.8 0, 0.0 -37,-0.0 0.050 121.3 59.0 163.1 -29.5 10.4 5.7 8.5 59 59 A A H > S+ 0 0 26 2,-0.2 4,-0.6 1,-0.1 -38,-0.1 0.630 97.5 62.5 -93.7 -19.0 8.8 2.3 8.2 60 60 A L H > S+ 0 0 1 2,-0.2 4,-2.7 1,-0.1 5,-0.4 0.750 99.4 57.8 -76.0 -25.4 8.1 2.8 4.6 61 61 A Q H 4 S+ 0 0 76 2,-0.2 5,-0.2 3,-0.2 -2,-0.2 0.993 97.6 54.3 -66.7 -65.0 11.8 3.0 3.9 62 62 A K H < S+ 0 0 175 -4,-0.8 -1,-0.2 1,-0.2 -2,-0.2 0.780 114.8 48.3 -39.4 -31.0 12.9 -0.3 5.3 63 63 A V H < S+ 0 0 8 -4,-0.6 -2,-0.2 -46,-0.1 -1,-0.2 0.987 137.4 1.4 -74.4 -67.3 10.3 -1.6 2.9 64 64 A F S < S- 0 0 38 -4,-2.7 -3,-0.2 2,-0.2 -2,-0.1 0.950 81.6-140.7 -85.3 -64.7 11.3 0.3 -0.2 65 65 A G + 0 0 40 1,-0.5 2,-0.3 -5,-0.4 -4,-0.2 0.261 62.5 113.3 116.6 -6.4 14.3 2.3 0.8 66 66 A E S S- 0 0 109 -6,-0.3 -1,-0.5 -5,-0.2 -2,-0.2 -0.754 73.9-125.4 -99.7 145.3 13.5 5.5 -1.1 67 67 A E S S+ 0 0 134 -2,-0.3 -11,-1.2 1,-0.1 2,-0.3 0.873 95.8 3.7 -52.1 -41.1 12.6 8.8 0.6 68 68 A K E -D 55 0B 51 -13,-0.2 2,-0.3 -12,-0.0 -13,-0.2 -0.954 68.3-170.0-144.4 160.3 9.4 8.8 -1.5 69 69 A L E -D 54 0B 4 -15,-1.5 -15,-2.1 -2,-0.3 2,-0.1 -0.909 29.9 -92.2-145.4 170.0 7.6 6.5 -3.9 70 70 A K E > -D 53 0B 75 -2,-0.3 4,-1.0 -17,-0.2 -17,-0.3 -0.452 26.6-126.3 -84.5 159.7 4.6 6.5 -6.3 71 71 A F T 4 S+ 0 0 15 -19,-2.7 -18,-0.1 2,-0.2 -1,-0.1 0.615 113.1 38.9 -79.1 -14.0 1.1 5.4 -5.3 72 72 A T T >> S+ 0 0 80 -20,-0.2 3,-2.1 2,-0.1 4,-0.5 0.780 105.4 62.7-101.6 -40.1 1.1 3.0 -8.2 73 73 A M T >4 S+ 0 0 53 1,-0.3 3,-1.1 2,-0.2 5,-0.2 0.816 84.3 80.1 -55.2 -32.7 4.7 1.8 -8.1 74 74 A V T >X>S+ 0 0 0 -4,-1.0 4,-4.6 1,-0.3 3,-1.6 0.830 88.3 57.8 -42.9 -37.5 3.9 0.4 -4.6 75 75 A S H <>5S+ 0 0 28 -3,-2.1 4,-1.1 1,-0.3 -1,-0.3 0.922 109.7 41.0 -60.6 -46.6 2.3 -2.4 -6.6 76 76 A Q H <<5S+ 0 0 126 -3,-1.1 -1,-0.3 -4,-0.5 -2,-0.2 0.017 125.0 40.9 -90.6 26.9 5.6 -3.2 -8.4 77 77 A K H <>5S+ 0 0 62 -3,-1.6 4,-0.7 -5,-0.1 3,-0.2 0.521 111.6 46.9-134.9 -50.3 7.4 -2.6 -5.1 78 78 A I H >X5S+ 0 0 0 -4,-4.6 4,-2.7 1,-0.2 3,-1.0 0.846 99.0 74.4 -67.0 -34.8 5.3 -4.2 -2.3 79 79 A S H 3<