==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=18-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 24-OCT-03 1V32 . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN RAFL09-47-K03; . SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; . AUTHOR M.YONEYAMA,N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA, . 101 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8106.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 56.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 5.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 31.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 5 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 133 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 154.2 3.5 15.1 -23.1 2 2 A S + 0 0 125 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.456 360.0 132.6-179.4 98.2 3.9 18.3 -21.1 3 3 A S - 0 0 125 1,-0.3 0, 0.0 -2,-0.1 0, 0.0 -0.950 49.4-100.2-148.2 164.7 2.6 18.7 -17.5 4 4 A G - 0 0 75 -2,-0.3 -1,-0.3 1,-0.1 -2,-0.0 0.426 21.3-156.4 -64.0-150.7 3.8 20.0 -14.2 5 5 A S - 0 0 125 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 0.239 57.3 -35.1-157.1 -58.0 4.9 17.8 -11.3 6 6 A S - 0 0 125 3,-0.0 2,-0.4 0, 0.0 3,-0.2 -0.758 45.7-163.1 178.0 133.6 4.5 19.4 -7.9 7 7 A G S S+ 0 0 70 1,-0.3 -3,-0.0 -2,-0.2 0, 0.0 -0.994 70.7 4.3-131.8 129.7 4.9 22.8 -6.4 8 8 A K S S- 0 0 198 -2,-0.4 -1,-0.3 1,-0.1 2,-0.1 0.990 80.6-135.6 63.2 81.7 5.2 23.8 -2.8 9 9 A R + 0 0 242 -3,-0.2 2,-0.3 4,-0.0 -1,-0.1 -0.388 30.1 177.4 -68.6 143.9 5.5 20.4 -1.1 10 10 A F - 0 0 173 2,-0.4 -1,-0.0 1,-0.1 -2,-0.0 -0.856 39.5 -48.7-140.5 174.1 3.4 20.0 2.1 11 11 A E S S- 0 0 150 -2,-0.3 3,-0.4 2,-0.1 -1,-0.1 -0.089 107.5 -7.3 -45.1 140.1 2.5 17.4 4.7 12 12 A F S S- 0 0 67 1,-0.2 -2,-0.4 -3,-0.1 5,-0.2 0.095 85.6 -94.7 58.2-178.0 1.5 14.1 3.2 13 13 A V S S- 0 0 56 3,-1.5 2,-0.7 -4,-0.1 3,-0.4 -0.591 82.6 -46.1-135.9 71.2 0.9 13.6 -0.5 14 14 A G S S- 0 0 70 -3,-0.4 3,-0.1 1,-0.2 18,-0.0 -0.897 116.1 -26.1 111.4-104.4 -2.8 14.2 -1.2 15 15 A W S S+ 0 0 30 -2,-0.7 76,-1.9 1,-0.1 2,-0.2 0.674 129.4 44.7-115.0 -39.6 -5.0 12.3 1.2 16 16 A G S S- 0 0 0 -3,-0.4 -3,-1.5 74,-0.2 74,-0.2 -0.635 94.7 -89.5-106.3 165.3 -2.8 9.5 2.3 17 17 A S >> - 0 0 25 -2,-0.2 4,-3.3 -5,-0.2 3,-0.5 -0.404 37.8-111.7 -72.6 148.9 0.9 9.4 3.3 18 18 A R H 3>>S+ 0 0 185 1,-0.3 4,-3.2 2,-0.2 5,-0.5 0.879 117.5 62.3 -44.7 -46.6 3.5 8.9 0.6 19 19 A Q H 3>5S+ 0 0 90 1,-0.2 4,-2.2 2,-0.2 -1,-0.3 0.925 112.2 34.5 -44.9 -58.1 4.2 5.5 2.1 20 20 A L H <>5S+ 0 0 0 -3,-0.5 4,-2.4 2,-0.2 -1,-0.2 0.922 121.2 51.3 -64.5 -45.8 0.6 4.3 1.4 21 21 A I H >X5S+ 0 0 7 -4,-3.3 4,-3.2 2,-0.2 3,-1.2 0.985 111.8 43.1 -53.4 -73.0 0.6 6.3 -1.8 22 22 A E H 3X5S+ 0 0 127 -4,-3.2 4,-3.4 1,-0.3 5,-0.2 0.879 113.2 54.6 -38.8 -53.5 3.8 5.0 -3.3 23 23 A F H 3XS+ 0 0 0 -4,-2.4 5,-3.8 -3,-1.2 4,-1.4 0.856 112.0 56.0 -72.2 -36.7 -0.5 2.0 -4.1 25 25 A H H <5S+ 0 0 101 -4,-3.2 3,-0.3 3,-0.2 -2,-0.2 0.946 108.9 46.2 -59.5 -51.3 1.4 3.6 -7.0 26 26 A S H <5S+ 0 0 69 -4,-3.4 -2,-0.2 1,-0.3 -1,-0.2 0.969 108.0 54.1 -55.0 -60.3 3.7 0.6 -7.4 27 27 A L H <5S- 0 0 58 -4,-2.0 -1,-0.3 -5,-0.2 -2,-0.2 0.808 126.1-106.1 -43.9 -33.3 0.9 -1.9 -7.2 28 28 A G T <5 + 0 0 62 -4,-1.4 2,-0.3 1,-0.3 -3,-0.2 0.538 67.3 154.2 112.7 16.4 -0.6 0.2 -10.0 29 29 A K < - 0 0 45 -5,-3.8 2,-1.3 -6,-0.2 -1,-0.3 -0.610 45.1-131.1 -79.3 133.1 -3.3 1.9 -8.0 30 30 A D - 0 0 129 -2,-0.3 2,-3.4 1,-0.1 3,-0.5 -0.699 16.2-162.4 -87.5 91.0 -4.4 5.2 -9.3 31 31 A T + 0 0 21 -2,-1.3 3,-0.1 1,-0.2 -1,-0.1 -0.308 50.8 122.5 -71.5 59.9 -4.3 7.4 -6.3 32 32 A S S S+ 0 0 91 -2,-3.4 2,-0.4 1,-0.3 -1,-0.2 0.953 70.6 22.5 -84.5 -67.2 -6.5 10.0 -8.0 33 33 A E S S- 0 0 160 -3,-0.5 -1,-0.3 1,-0.1 -3,-0.0 -0.838 106.2 -77.7-107.0 142.8 -9.5 10.3 -5.7 34 34 A M - 0 0 104 -2,-0.4 2,-0.2 -3,-0.1 -1,-0.1 -0.074 55.4-145.4 -38.1 111.8 -9.5 9.4 -2.0 35 35 A I - 0 0 26 1,-0.1 2,-0.3 2,-0.0 -1,-0.1 -0.542 19.4-101.3 -85.6 152.5 -9.8 5.6 -2.0 36 36 A S >> - 0 0 76 -2,-0.2 4,-1.8 1,-0.1 3,-1.0 -0.569 22.5-133.3 -76.1 132.1 -11.7 3.7 0.6 37 37 A R H 3> S+ 0 0 55 -2,-0.3 4,-3.9 1,-0.3 5,-0.4 0.930 106.5 59.8 -46.8 -56.9 -9.6 2.2 3.3 38 38 A Y H 3> S+ 0 0 175 1,-0.2 4,-3.1 2,-0.2 -1,-0.3 0.837 107.2 49.2 -40.3 -42.8 -11.5 -1.1 3.0 39 39 A D H <> S+ 0 0 72 -3,-1.0 4,-3.3 2,-0.2 5,-0.3 0.996 112.4 43.1 -61.9 -67.2 -10.3 -1.2 -0.6 40 40 A V H X S+ 0 0 0 -4,-1.8 4,-2.1 1,-0.3 -2,-0.2 0.886 118.4 48.2 -44.9 -46.6 -6.7 -0.4 -0.0 41 41 A S H X S+ 0 0 13 -4,-3.9 4,-2.6 -5,-0.2 -1,-0.3 0.915 110.2 50.8 -61.4 -45.3 -6.9 -2.9 2.9 42 42 A D H X S+ 0 0 95 -4,-3.1 4,-1.9 -5,-0.4 -2,-0.2 0.911 110.5 49.4 -58.4 -44.7 -8.6 -5.4 0.6 43 43 A T H X S+ 0 0 33 -4,-3.3 4,-3.6 1,-0.2 -1,-0.2 0.850 109.2 53.2 -62.7 -35.9 -5.9 -5.0 -1.9 44 44 A I H X S+ 0 0 0 -4,-2.1 4,-3.7 -5,-0.3 -2,-0.2 0.927 106.5 51.2 -64.6 -46.6 -3.3 -5.5 0.8 45 45 A A H X S+ 0 0 21 -4,-2.6 4,-1.4 2,-0.2 -1,-0.2 0.878 115.3 43.9 -57.5 -39.6 -4.9 -8.7 1.9 46 46 A K H X S+ 0 0 138 -4,-1.9 4,-4.6 2,-0.2 -2,-0.2 0.952 114.2 48.2 -69.9 -52.0 -4.7 -9.8 -1.7 47 47 A Y H X>S+ 0 0 17 -4,-3.6 4,-3.5 1,-0.2 5,-0.5 0.903 106.3 58.4 -54.2 -46.0 -1.2 -8.6 -2.3 48 48 A I H X>S+ 0 0 0 -4,-3.7 5,-4.3 1,-0.2 4,-2.3 0.912 117.8 32.5 -50.0 -48.4 -0.0 -10.2 0.9 49 49 A S H <5S+ 0 0 71 -4,-1.4 -2,-0.2 3,-0.3 -1,-0.2 0.931 113.7 60.3 -74.6 -48.8 -1.2 -13.6 -0.6 50 50 A K H <5S+ 0 0 170 -4,-4.6 -2,-0.2 1,-0.2 -3,-0.2 0.910 119.7 29.3 -42.9 -54.8 -0.5 -12.7 -4.2 51 51 A E H <5S- 0 0 115 -4,-3.5 -1,-0.2 -5,-0.2 -2,-0.2 0.902 116.2-115.8 -73.6 -43.8 3.2 -12.3 -3.2 52 52 A G T << + 0 0 47 -4,-2.3 -3,-0.3 -5,-0.5 -4,-0.1 0.765 63.7 144.8 107.5 43.7 3.0 -14.8 -0.4 53 53 A L < + 0 0 5 -5,-4.3 10,-2.3 -6,-0.2 -4,-0.2 0.656 39.3 116.5 -82.0 -18.0 3.7 -12.6 2.7 54 54 A L B -A 62 0A 44 -6,-0.7 8,-0.2 8,-0.2 5,-0.2 0.063 68.9-115.5 -45.0 162.5 1.3 -14.8 4.6 55 55 A D - 0 0 44 6,-0.8 6,-0.2 3,-0.4 -1,-0.1 -0.876 9.2-151.2-110.7 141.5 2.8 -16.8 7.5 56 56 A P S S+ 0 0 114 0, 0.0 3,-0.3 0, 0.0 -1,-0.1 0.868 99.5 56.3 -75.0 -39.3 2.9 -20.6 7.7 57 57 A S S S- 0 0 111 1,-0.3 2,-0.2 2,-0.1 3,-0.1 0.780 135.6 -4.5 -62.3 -27.3 2.7 -20.7 11.5 58 58 A N > - 0 0 77 1,-0.1 3,-1.8 3,-0.1 -3,-0.4 -0.640 55.0-164.1-171.5 106.4 -0.5 -18.7 11.1 59 59 A K T 3 S+ 0 0 130 -3,-0.3 20,-0.2 1,-0.3 -4,-0.2 0.831 90.3 75.6 -61.5 -32.9 -2.0 -17.4 7.9 60 60 A K T 3 S+ 0 0 131 -6,-0.1 19,-1.5 18,-0.1 20,-0.3 0.768 95.7 63.1 -49.3 -26.4 -4.1 -15.1 10.1 61 61 A K E < S- B 0 78A 82 -3,-1.8 -6,-0.8 17,-0.2 2,-0.4 -0.385 80.7-136.0 -94.1 174.9 -0.9 -13.2 10.5 62 62 A V E -AB 54 77A 0 15,-2.6 15,-2.6 -8,-0.2 2,-0.9 -0.994 1.6-150.3-138.8 128.6 1.1 -11.4 7.8 63 63 A V E - B 0 76A 40 -10,-2.3 13,-0.3 -2,-0.4 5,-0.1 -0.851 23.4-136.8-101.9 101.8 4.9 -11.4 7.4 64 64 A C - 0 0 8 11,-2.5 -2,-0.0 -2,-0.9 -16,-0.0 -0.197 20.6-175.0 -54.4 146.0 5.9 -8.2 5.8 65 65 A D - 0 0 109 11,-0.0 -1,-0.1 0, 0.0 11,-0.0 0.780 59.6 -64.1-109.0 -57.5 8.5 -8.6 3.0 66 66 A K S > S+ 0 0 132 3,-0.0 4,-3.6 9,-0.0 5,-0.4 0.160 125.6 57.7-159.4 -64.5 9.5 -5.1 2.0 67 67 A R H > S+ 0 0 89 1,-0.3 4,-1.0 2,-0.2 -44,-0.1 0.900 111.9 47.7 -47.0 -49.1 6.7 -3.0 0.5 68 68 A L H >>S+ 0 0 0 2,-0.2 4,-4.1 1,-0.2 5,-0.8 0.887 113.1 49.7 -60.4 -40.6 4.7 -3.5 3.7 69 69 A V H 45S+ 0 0 29 1,-0.2 -2,-0.2 2,-0.2 -1,-0.2 0.970 109.3 48.4 -62.0 -56.2 7.7 -2.6 5.7 70 70 A L H <5S+ 0 0 103 -4,-3.6 -1,-0.2 1,-0.2 -2,-0.2 0.696 120.3 44.3 -57.4 -17.9 8.4 0.6 3.7 71 71 A L H <5S+ 0 0 0 -4,-1.0 -2,-0.2 -5,-0.4 -3,-0.2 0.930 138.2 2.9 -88.8 -69.1 4.7 1.1 4.3 72 72 A F T <5S- 0 0 32 -4,-4.1 -3,-0.2 2,-0.2 -2,-0.1 0.929 87.2-132.4 -84.0 -53.7 4.1 0.3 7.9 73 73 A G < + 0 0 52 -5,-0.8 2,-0.3 1,-0.4 -4,-0.2 0.531 64.3 117.6 107.9 14.0 7.7 -0.5 9.0 74 74 A T - 0 0 51 -6,-0.3 -1,-0.4 1,-0.1 -2,-0.2 -0.722 61.0-141.3-110.7 161.4 6.9 -3.7 10.8 75 75 A R S S+ 0 0 193 1,-0.3 -11,-2.5 -2,-0.3 2,-0.3 0.882 87.2 17.5 -85.6 -45.2 8.0 -7.3 10.2 76 76 A T E +B 63 0A 73 -13,-0.3 -1,-0.3 -7,-0.0 2,-0.3 -0.949 67.5 165.2-130.8 150.4 4.7 -8.9 11.0 77 77 A I E -B 62 0A 14 -15,-2.6 -15,-2.6 -2,-0.3 2,-0.5 -0.895 39.3 -89.7-150.9 177.0 1.1 -7.7 11.3 78 78 A F E > -B 61 0A 86 -2,-0.3 4,-1.9 -17,-0.2 -17,-0.2 -0.870 26.4-132.0-102.3 124.7 -2.4 -8.9 11.5 79 79 A R T 4 S+ 0 0 117 -19,-1.5 4,-0.3 -2,-0.5 -1,-0.1 0.764 115.2 44.1 -40.1 -29.5 -4.4 -9.3 8.2 80 80 A M T >> S+ 0 0 152 -20,-0.3 3,-1.9 1,-0.2 4,-0.6 0.898 100.3 63.9 -83.5 -46.8 -7.0 -7.4 10.1 81 81 A K H 3> S+ 0 0 116 1,-0.3 4,-4.4 2,-0.2 3,-0.4 0.784 84.4 83.7 -47.4 -28.7 -4.7 -4.8 11.7 82 82 A V H 3X S+ 0 0 1 -4,-1.9 4,-2.7 1,-0.3 -1,-0.3 0.895 86.5 52.4 -40.1 -54.7 -4.2 -3.8 8.0 83 83 A Y H <> S+ 0 0 101 -3,-1.9 4,-2.1 -4,-0.3 -1,-0.3 0.908 116.7 38.4 -49.2 -49.9 -7.4 -1.8 8.2 84 84 A D H X S+ 0 0 87 -4,-0.6 4,-1.5 -3,-0.4 -2,-0.2 0.948 109.3 60.8 -67.1 -50.7 -6.1 0.0 11.3 85 85 A L H X S+ 0 0 38 -4,-4.4 4,-1.4 1,-0.3 3,-0.4 0.859 112.8 40.1 -43.0 -42.7 -2.5 0.2 10.0 86 86 A L H X S+ 0 0 0 -4,-2.7 4,-2.2 -5,-0.3 -1,-0.3 0.880 100.5 71.8 -74.8 -40.5 -4.0 2.2 7.2 87 87 A E H < S+ 0 0 53 -4,-2.1 -1,-0.2 -5,-0.3 -2,-0.2 0.780 104.3 44.8 -44.6 -30.1 -6.3 4.1 9.5 88 88 A K H < S+ 0 0 179 -4,-1.5 -1,-0.2 -3,-0.4 -2,-0.2 0.968 110.9 48.9 -78.7 -61.7 -3.1 5.8 10.6 89 89 A H H < S+ 0 0 22 -4,-1.4 -2,-0.2 -5,-0.2 -3,-0.1 0.924 95.9 83.7 -40.9 -65.7 -1.5 6.5 7.3 90 90 A Y S < S- 0 0 11 -4,-2.2 -74,-0.2 -74,-0.2 -75,-0.0 -0.051 75.8-142.6 -42.8 139.7 -4.7 8.0 5.9 91 91 A K + 0 0 92 -76,-1.9 -75,-0.1 2,-0.1 -76,-0.1 0.406 51.4 110.4 -81.4-139.9 -5.0 11.6 6.8 92 92 A E S S- 0 0 130 -77,-0.1 -77,-0.0 -76,-0.0 0, 0.0 0.808 81.0 -85.3 67.0 114.1 -8.3 13.4 7.7 93 93 A N - 0 0 146 1,-0.1 2,-0.6 2,-0.0 -2,-0.1 -0.184 43.2-155.2 -48.7 133.8 -8.7 14.4 11.3 94 94 A Q - 0 0 113 2,-0.1 2,-0.2 0, 0.0 -1,-0.1 -0.892 3.1-154.2-121.7 99.6 -10.0 11.5 13.3 95 95 A D + 0 0 150 -2,-0.6 2,-0.3 2,-0.0 -2,-0.0 -0.526 30.2 148.1 -73.5 134.7 -11.9 12.5 16.5 96 96 A S - 0 0 124 -2,-0.2 3,-0.1 4,-0.0 -2,-0.1 -0.874 24.8 -59.7-169.7 134.3 -11.9 9.8 19.2 97 97 A G - 0 0 56 1,-0.3 2,-0.2 -2,-0.3 3,-0.1 -0.777 35.1 -89.0 142.6 174.6 -12.0 9.8 23.0 98 98 A P S S+ 0 0 134 0, 0.0 -1,-0.3 0, 0.0 3,-0.2 0.618 111.6 7.0 -75.0 171.5 -11.7 9.9 25.7 99 99 A S S S- 0 0 115 -2,-0.2 2,-0.8 1,-0.1 0, 0.0 0.297 87.2 -96.2 74.0 153.3 -9.7 6.8 26.1 100 100 A S 0 0 128 -3,-0.1 -1,-0.1 -4,-0.0 -4,-0.0 -0.725 360.0 360.0-107.4 80.2 -8.3 4.7 23.2 101 101 A G 0 0 122 -2,-0.8 -2,-0.0 -3,-0.2 0, 0.0 0.092 360.0 360.0-103.4 360.0 -10.9 2.0 22.7