==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=18-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 29-OCT-03 1V38 . COMPND 2 MOLECULE: SAM-DOMAIN PROTEIN SAMSN-1; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR A.GORONCY,T.KIGAWA,S.KOSHIBA,N.KOBAYASHI,N.TOCHIO,M.INOUE, . 78 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5782.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 66.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 14.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 35.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 5 6.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 127 0, 0.0 4,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-118.1 -14.3 6.8 5.9 2 2 A S - 0 0 87 1,-0.1 4,-0.0 2,-0.1 0, 0.0 0.014 360.0-109.0 -40.1 144.3 -16.0 6.1 2.6 3 3 A S S S+ 0 0 140 1,-0.1 2,-0.4 2,-0.0 -1,-0.1 0.895 106.6 40.0 -44.6 -49.2 -19.2 8.2 2.1 4 4 A G S S- 0 0 46 1,-0.0 -2,-0.1 0, 0.0 -1,-0.1 -0.869 90.9-117.4-109.7 140.0 -21.3 5.0 2.6 5 5 A S - 0 0 121 -2,-0.4 3,-0.1 1,-0.1 -2,-0.0 -0.305 24.7-177.7 -69.5 154.4 -20.6 2.3 5.1 6 6 A S - 0 0 110 1,-0.2 2,-0.2 -4,-0.0 -1,-0.1 0.709 45.1 -91.5-117.9 -53.1 -19.9 -1.3 3.9 7 7 A G - 0 0 67 0, 0.0 2,-0.3 0, 0.0 -1,-0.2 -0.734 58.8 -36.2 175.1-122.3 -19.5 -3.5 7.0 8 8 A R - 0 0 183 -2,-0.2 2,-0.3 -3,-0.1 0, 0.0 -0.873 40.2-144.3-132.6 165.3 -16.6 -4.6 9.2 9 9 A R - 0 0 158 -2,-0.3 2,-0.6 3,-0.0 4,-0.0 -0.946 9.8-137.8-131.9 152.6 -13.0 -5.6 8.8 10 10 A E S S- 0 0 117 -2,-0.3 3,-0.1 1,-0.1 -2,-0.0 -0.887 77.9 -49.3-114.6 101.9 -10.7 -8.1 10.5 11 11 A N S S+ 0 0 163 -2,-0.6 2,-0.6 1,-0.2 -1,-0.1 0.776 94.1 156.5 43.5 28.9 -7.2 -6.7 11.3 12 12 A H - 0 0 80 27,-0.0 2,-0.4 26,-0.0 -1,-0.2 -0.758 33.0-148.4 -89.6 122.3 -7.3 -5.5 7.7 13 13 A Q - 0 0 46 -2,-0.6 26,-2.2 -3,-0.1 27,-0.3 -0.734 9.5-140.1 -92.7 136.6 -5.0 -2.5 7.0 14 14 A T B > -A 38 0A 31 -2,-0.4 4,-3.0 24,-0.2 24,-0.2 -0.618 16.1-125.1 -94.3 154.3 -6.0 0.0 4.3 15 15 A I H > S+ 0 0 0 22,-1.3 4,-2.3 -2,-0.2 5,-0.3 0.894 109.8 60.2 -62.5 -41.4 -3.7 1.7 1.8 16 16 A Q H > S+ 0 0 81 21,-0.4 4,-1.2 1,-0.2 -1,-0.2 0.891 116.8 32.0 -53.6 -42.9 -4.8 5.1 3.0 17 17 A E H > S+ 0 0 128 2,-0.2 4,-1.4 -3,-0.2 -1,-0.2 0.816 115.4 58.4 -84.2 -34.0 -3.5 4.4 6.5 18 18 A F H < S+ 0 0 0 -4,-3.0 4,-0.5 1,-0.2 -2,-0.2 0.760 111.6 43.6 -66.6 -24.7 -0.7 2.1 5.3 19 19 A L H >X>S+ 0 0 0 -4,-2.3 5,-2.5 -5,-0.2 3,-0.6 0.848 103.2 62.9 -87.6 -39.6 0.7 5.0 3.4 20 20 A E H ><5S+ 0 0 92 -4,-1.2 3,-0.7 -5,-0.3 -2,-0.2 0.855 101.3 54.9 -53.6 -37.1 0.2 7.7 6.0 21 21 A R T 3<5S+ 0 0 164 -4,-1.4 -1,-0.3 1,-0.2 -2,-0.2 0.868 116.2 36.2 -65.5 -37.3 2.7 5.7 8.2 22 22 A I T <45S- 0 0 26 -3,-0.6 -1,-0.2 -4,-0.5 -2,-0.2 0.277 111.5-120.4 -98.0 9.0 5.3 5.8 5.5 23 23 A H T <<5S+ 0 0 147 -3,-0.7 -3,-0.2 -4,-0.5 3,-0.1 0.877 82.5 117.9 53.6 40.4 4.3 9.3 4.4 24 24 A L > < + 0 0 2 -5,-2.5 3,-2.5 1,-0.1 -4,-0.2 0.121 21.9 119.2-120.5 17.6 3.5 8.0 0.9 25 25 A Q G > + 0 0 86 -6,-0.4 3,-1.7 1,-0.3 4,-0.4 0.653 59.0 83.1 -58.1 -13.5 -0.2 8.8 0.9 26 26 A E G 3 S+ 0 0 127 1,-0.3 -1,-0.3 -7,-0.1 4,-0.2 0.659 91.1 48.7 -65.4 -14.6 0.6 10.9 -2.1 27 27 A Y G <> S+ 0 0 19 -3,-2.5 4,-2.4 2,-0.1 -1,-0.3 0.377 82.9 102.3-104.3 0.6 0.4 7.7 -4.1 28 28 A T H X> S+ 0 0 21 -3,-1.7 4,-2.9 2,-0.2 3,-1.5 0.957 82.3 43.3 -46.1 -74.3 -3.0 6.7 -2.6 29 29 A S H 3> S+ 0 0 64 -4,-0.4 4,-3.0 1,-0.3 5,-0.4 0.879 113.5 54.0 -39.5 -51.1 -5.2 7.7 -5.6 30 30 A T H 3> S+ 0 0 35 -4,-0.2 4,-1.1 1,-0.2 -1,-0.3 0.868 115.6 39.9 -54.2 -38.9 -2.6 6.2 -7.9 31 31 A L H S+ 0 0 0 -4,-2.4 5,-1.7 -3,-1.5 4,-1.3 0.958 118.5 44.4 -75.7 -54.7 -2.9 2.9 -6.0 32 32 A L H ><5S+ 0 0 43 -4,-2.9 3,-1.4 1,-0.2 -2,-0.2 0.962 113.8 49.7 -54.2 -58.0 -6.7 3.0 -5.3 33 33 A L H 3<5S+ 0 0 146 -4,-3.0 -1,-0.2 1,-0.3 -2,-0.2 0.890 109.4 52.9 -48.9 -44.8 -7.5 4.0 -8.9 34 34 A N H 3<5S- 0 0 101 -4,-1.1 -1,-0.3 -5,-0.4 -2,-0.2 0.777 131.9 -95.5 -63.5 -26.2 -5.3 1.2 -10.2 35 35 A G T <<5S+ 0 0 35 -3,-1.4 2,-1.4 -4,-1.3 3,-0.2 0.034 85.7 128.7 134.5 -27.5 -7.2 -1.2 -7.9 36 36 A Y < + 0 0 27 -5,-1.7 -1,-0.2 1,-0.2 -2,-0.1 -0.433 19.6 149.1 -63.7 92.5 -5.1 -1.3 -4.8 37 37 A E + 0 0 130 -2,-1.4 -22,-1.3 1,-0.3 -21,-0.4 0.840 64.6 12.7 -93.6 -42.4 -7.8 -0.6 -2.2 38 38 A T B >> S-A 14 0A 21 -3,-0.2 3,-2.8 -24,-0.2 4,-1.1 -0.901 86.8 -94.6-134.2 162.7 -6.4 -2.6 0.7 39 39 A L H 3> S+ 0 0 14 -26,-2.2 4,-2.3 1,-0.3 3,-0.3 0.843 116.3 75.5 -41.9 -40.8 -3.1 -4.3 1.7 40 40 A D H 34 S+ 0 0 76 -27,-0.3 -1,-0.3 1,-0.3 4,-0.1 0.848 100.5 41.9 -40.9 -42.5 -4.7 -7.5 0.3 41 41 A D H X4 S+ 0 0 66 -3,-2.8 3,-1.8 1,-0.2 4,-0.5 0.852 108.2 59.2 -75.5 -36.3 -4.0 -6.1 -3.1 42 42 A L H >< S+ 0 0 3 -4,-1.1 3,-1.3 -3,-0.3 -2,-0.2 0.804 88.1 74.8 -62.4 -29.2 -0.5 -4.8 -2.1 43 43 A K T 3< S+ 0 0 122 -4,-2.3 -1,-0.3 1,-0.3 -2,-0.2 0.636 101.9 43.0 -59.0 -11.9 0.4 -8.4 -1.3 44 44 A D T < S+ 0 0 118 -3,-1.8 -1,-0.3 -5,-0.2 -2,-0.2 0.529 92.6 105.9-108.8 -13.2 0.6 -8.8 -5.0 45 45 A I < - 0 0 8 -3,-1.3 2,-0.2 -4,-0.5 -3,-0.0 -0.366 49.5-172.4 -69.4 147.5 2.4 -5.5 -5.8 46 46 A K > - 0 0 112 -2,-0.1 4,-1.8 1,-0.1 -2,-0.1 -0.728 41.2 -88.7-131.2-179.5 6.1 -5.7 -6.7 47 47 A E H > S+ 0 0 107 -2,-0.2 4,-1.5 1,-0.2 -1,-0.1 0.928 125.8 48.9 -57.6 -48.1 9.0 -3.3 -7.4 48 48 A S H > S+ 0 0 69 1,-0.2 4,-2.0 2,-0.2 5,-0.3 0.939 104.8 58.9 -58.0 -50.1 8.1 -3.0 -11.0 49 49 A H H > S+ 0 0 79 1,-0.2 4,-1.7 2,-0.2 3,-0.3 0.920 103.0 52.3 -44.4 -56.2 4.5 -2.3 -10.3 50 50 A L H ><>S+ 0 0 0 -4,-1.8 5,-2.3 1,-0.2 3,-0.5 0.907 106.4 54.2 -48.4 -48.6 5.4 0.8 -8.2 51 51 A I H ><>S+ 0 0 74 -4,-1.5 3,-1.2 1,-0.3 5,-0.6 0.911 110.3 45.4 -53.4 -46.7 7.5 2.1 -11.1 52 52 A E H 3<5S+ 0 0 175 -4,-2.0 -1,-0.3 -3,-0.3 -2,-0.2 0.724 104.1 65.4 -70.2 -21.4 4.5 1.8 -13.4 53 53 A L T <<5S- 0 0 10 -4,-1.7 -1,-0.3 -3,-0.5 -2,-0.2 0.130 131.2 -92.2 -87.4 21.1 2.4 3.5 -10.7 54 54 A N T < 5S+ 0 0 123 -3,-1.2 -3,-0.2 -5,-0.2 3,-0.2 0.756 99.5 119.0 74.7 25.1 4.5 6.6 -11.1 55 55 A I T < + 0 0 0 -5,-2.3 6,-0.4 -6,-0.2 -4,-0.3 -0.060 17.4 141.6-110.8 30.5 6.8 5.5 -8.4 56 56 A A < + 0 0 65 -5,-0.6 -1,-0.2 -6,-0.2 -5,-0.1 0.728 50.5 97.3 -43.4 -22.7 9.9 5.4 -10.5 57 57 A D > - 0 0 88 -3,-0.2 4,-2.0 1,-0.1 3,-0.1 -0.535 69.5-150.6 -75.1 133.2 11.6 6.8 -7.4 58 58 A P H > S+ 0 0 70 0, 0.0 4,-3.1 0, 0.0 5,-0.5 0.873 92.1 66.1 -69.8 -39.0 13.3 4.1 -5.2 59 59 A E H > S+ 0 0 121 1,-0.2 4,-1.6 2,-0.2 5,-0.1 0.893 111.6 35.3 -49.9 -44.9 12.7 6.0 -2.0 60 60 A D H > S+ 0 0 16 2,-0.2 4,-2.4 3,-0.2 5,-0.2 0.931 116.3 53.7 -75.9 -48.8 9.0 5.4 -2.4 61 61 A R H X S+ 0 0 32 -4,-2.0 4,-3.2 -6,-0.4 3,-0.2 0.950 114.5 40.7 -50.2 -58.1 9.2 2.0 -3.9 62 62 A A H X>S+ 0 0 55 -4,-3.1 4,-2.7 1,-0.2 5,-0.6 0.948 115.3 50.3 -56.9 -52.8 11.3 0.6 -1.1 63 63 A R H X5S+ 0 0 139 -4,-1.6 4,-0.6 -5,-0.5 -1,-0.2 0.794 115.0 46.8 -57.0 -28.5 9.3 2.4 1.6 64 64 A L H X5S+ 0 0 0 -4,-2.4 4,-1.9 -3,-0.2 -2,-0.2 0.910 119.8 36.2 -79.9 -46.1 6.2 0.9 -0.1 65 65 A L H X5S+ 0 0 27 -4,-3.2 4,-3.0 -5,-0.2 5,-0.2 0.983 117.1 49.3 -70.6 -60.5 7.5 -2.6 -0.4 66 66 A S H X5S+ 0 0 74 -4,-2.7 4,-1.6 1,-0.2 -3,-0.2 0.858 113.6 50.6 -47.0 -40.2 9.5 -2.9 2.8 67 67 A A H X