==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 27-NOV-03 1V63 . COMPND 2 MOLECULE: NUCLEOLAR TRANSCRIPTION FACTOR 1; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR M.SATO,K.SAITO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 101 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8471.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 70 69.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 12.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 55 54.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 128 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 164.4 -19.0 5.1 4.9 2 2 A S - 0 0 122 0, 0.0 2,-0.3 0, 0.0 3,-0.1 -0.934 360.0-144.4 178.8 163.0 -18.6 2.5 2.1 3 3 A S - 0 0 119 1,-0.5 0, 0.0 -2,-0.3 0, 0.0 -0.918 64.4 -19.4-149.5 117.7 -18.6 -1.2 1.3 4 4 A G + 0 0 76 -2,-0.3 -1,-0.5 2,-0.1 3,-0.1 0.447 47.9 178.9 63.2 149.4 -16.5 -3.0 -1.2 5 5 A S - 0 0 120 1,-0.3 2,-0.3 -3,-0.1 4,-0.0 0.401 57.7 -24.4-145.4 -54.3 -14.7 -1.2 -4.1 6 6 A S - 0 0 93 1,-0.3 -1,-0.3 0, 0.0 -2,-0.1 -0.974 59.1 -99.4-163.5 165.1 -12.7 -3.6 -6.2 7 7 A G S S+ 0 0 48 -2,-0.3 -1,-0.3 -3,-0.1 2,-0.1 0.967 102.3 32.0 -52.8 -87.6 -10.9 -7.0 -6.1 8 8 A P S S- 0 0 18 0, 0.0 2,-0.5 0, 0.0 59,-0.0 -0.407 78.4-138.8 -75.0 151.2 -7.2 -6.1 -5.5 9 9 A K - 0 0 164 -2,-0.1 58,-0.1 -4,-0.0 -2,-0.0 -0.948 34.9 -92.4-115.8 131.3 -6.2 -3.0 -3.5 10 10 A K - 0 0 186 -2,-0.5 54,-0.1 1,-0.1 -1,-0.0 -0.145 54.8-151.8 -41.8 101.5 -3.4 -0.7 -4.6 11 11 A P - 0 0 24 0, 0.0 -1,-0.1 0, 0.0 49,-0.1 -0.158 16.8 -92.1 -75.0 173.5 -0.6 -2.4 -2.6 12 12 A P - 0 0 10 0, 0.0 45,-0.0 0, 0.0 52,-0.0 0.006 23.3-151.9 -75.1-174.2 2.5 -0.7 -1.2 13 13 A M S S+ 0 0 127 51,-0.0 51,-0.1 0, 0.0 0, 0.0 0.631 82.3 5.9-124.1 -63.9 5.8 -0.4 -2.9 14 14 A N S S- 0 0 112 46,-0.0 46,-0.2 47,-0.0 47,-0.2 0.925 102.2 -98.9 -89.6 -65.7 8.7 -0.1 -0.5 15 15 A G S >> S+ 0 0 1 45,-0.1 4,-1.7 44,-0.1 3,-0.7 0.097 105.0 84.9 167.8 -30.1 7.1 -0.7 2.9 16 16 A Y H 3> S+ 0 0 81 1,-0.3 4,-1.7 2,-0.2 5,-0.1 0.819 91.5 55.2 -62.3 -32.4 6.6 2.8 4.4 17 17 A Q H 3> S+ 0 0 92 2,-0.2 4,-2.5 1,-0.2 -1,-0.3 0.739 103.2 58.1 -72.0 -23.9 3.3 3.0 2.5 18 18 A K H <> S+ 0 0 40 -3,-0.7 4,-1.5 2,-0.2 -2,-0.2 0.978 106.8 43.6 -68.8 -58.5 2.3 -0.2 4.1 19 19 A F H X S+ 0 0 16 -4,-1.7 4,-1.4 1,-0.2 -2,-0.2 0.872 115.8 51.3 -54.0 -40.9 2.6 1.0 7.7 20 20 A S H >X S+ 0 0 6 -4,-1.7 4,-1.9 1,-0.2 3,-1.2 0.978 102.5 56.0 -60.7 -59.6 0.9 4.2 6.7 21 21 A Q H 3X S+ 0 0 109 -4,-2.5 4,-1.7 1,-0.3 -1,-0.2 0.802 105.9 56.2 -42.2 -34.5 -2.1 2.6 5.0 22 22 A E H 3X S+ 0 0 66 -4,-1.5 4,-2.8 2,-0.2 -1,-0.3 0.915 106.3 46.4 -65.8 -45.2 -2.5 0.9 8.4 23 23 A L H < + 0 0 22 -4,-1.2 3,-0.9 -5,-0.2 -3,-0.1 0.701 54.1 137.1 101.5 28.9 -7.9 5.6 12.5 28 28 A E T 3 S+ 0 0 116 -5,-0.5 3,-0.2 1,-0.3 -4,-0.1 0.795 82.8 35.4 -73.7 -29.9 -5.3 6.3 15.2 29 29 A L T > S+ 0 0 4 -6,-0.6 3,-0.7 1,-0.1 -1,-0.3 -0.227 79.8 117.6-116.2 40.0 -4.7 9.8 13.7 30 30 A N T < + 0 0 85 -3,-0.9 -1,-0.1 1,-0.2 -2,-0.1 0.313 61.7 76.5 -87.2 7.4 -8.3 10.4 12.7 31 31 A H T 3 S+ 0 0 141 -3,-0.2 -1,-0.2 2,-0.1 -2,-0.1 0.684 96.3 48.6 -88.0 -22.1 -8.3 13.3 15.1 32 32 A L S < S- 0 0 20 -3,-0.7 2,-0.1 1,-0.1 -3,-0.0 -0.677 97.1 -88.4-114.0 169.2 -6.3 15.4 12.7 33 33 A P > - 0 0 84 0, 0.0 4,-3.0 0, 0.0 5,-0.1 -0.330 44.7 -99.7 -75.0 158.7 -6.7 16.2 9.0 34 34 A L H > S+ 0 0 91 1,-0.2 4,-3.0 2,-0.2 5,-0.2 0.898 122.7 60.8 -40.2 -55.2 -5.1 14.1 6.3 35 35 A K H > S+ 0 0 169 1,-0.2 4,-1.9 2,-0.2 5,-0.3 0.904 111.3 36.9 -37.0 -69.3 -2.2 16.7 6.1 36 36 A E H > S+ 0 0 100 1,-0.2 4,-4.7 2,-0.2 5,-0.3 0.920 112.9 60.7 -51.3 -50.4 -1.3 16.1 9.8 37 37 A R H X S+ 0 0 54 -4,-3.0 4,-3.1 2,-0.2 -1,-0.2 0.918 107.4 44.1 -41.5 -62.0 -2.0 12.4 9.4 38 38 A M H >X S+ 0 0 77 -4,-3.0 4,-2.5 2,-0.2 3,-0.6 0.960 118.0 41.8 -48.1 -68.6 0.6 12.0 6.7 39 39 A V H 3X S+ 0 0 96 -4,-1.9 4,-1.7 1,-0.3 -1,-0.2 0.902 115.2 52.8 -46.1 -49.2 3.3 14.0 8.4 40 40 A E H 3X S+ 0 0 40 -4,-4.7 4,-2.3 -5,-0.3 -1,-0.3 0.877 110.5 48.8 -55.0 -40.8 2.3 12.3 11.7 41 41 A I H < S+ 0 0 64 -4,-1.7 3,-0.9 -5,-0.3 4,-0.4 0.969 108.7 48.0 -69.7 -56.3 7.1 10.4 12.0 44 44 A R H >X S+ 0 0 98 -4,-2.3 4,-1.9 1,-0.3 3,-1.4 0.858 111.0 53.1 -52.0 -38.8 5.7 7.3 13.5 45 45 A W H 3< S+ 0 0 35 -4,-3.0 -1,-0.3 1,-0.3 -2,-0.2 0.818 104.6 55.7 -66.3 -30.8 7.4 5.4 10.8 46 46 A Q T << S+ 0 0 156 -4,-0.9 -1,-0.3 -3,-0.9 -2,-0.2 0.462 107.0 53.4 -79.5 -1.8 10.6 7.1 11.8 47 47 A R T <4 S+ 0 0 175 -3,-1.4 -2,-0.2 -4,-0.4 -1,-0.2 0.863 90.0 82.0 -96.2 -51.3 10.0 5.8 15.3 48 48 A I S < S- 0 0 43 -4,-1.9 2,-0.2 1,-0.1 -3,-0.0 0.129 82.9-108.9 -46.8 171.8 9.6 2.1 14.6 49 49 A S > - 0 0 87 1,-0.0 4,-1.5 0, 0.0 5,-0.2 -0.510 32.5 -91.4-103.5 173.6 12.7 -0.0 14.2 50 50 A Q H > S+ 0 0 124 1,-0.2 4,-4.1 2,-0.2 5,-0.3 0.911 122.2 62.9 -48.2 -50.5 14.3 -1.7 11.2 51 51 A S H > S+ 0 0 78 2,-0.2 4,-3.8 1,-0.2 -1,-0.2 0.912 104.1 46.2 -38.9 -66.5 12.4 -4.8 11.9 52 52 A Q H > S+ 0 0 72 2,-0.2 4,-2.8 1,-0.2 5,-0.4 0.933 115.5 43.8 -41.6 -72.2 9.0 -3.1 11.4 53 53 A K H X S+ 0 0 44 -4,-1.5 4,-2.8 1,-0.3 -1,-0.2 0.884 115.5 51.4 -41.0 -50.1 10.0 -1.4 8.2 54 54 A E H X S+ 0 0 96 -4,-4.1 4,-2.7 -5,-0.2 -1,-0.3 0.926 111.2 47.1 -54.5 -49.7 11.6 -4.7 7.1 55 55 A H H X S+ 0 0 78 -4,-3.8 4,-3.1 -3,-0.3 3,-0.3 0.970 114.6 44.7 -56.2 -59.4 8.4 -6.5 7.9 56 56 A Y H X S+ 0 0 30 -4,-2.8 4,-2.4 1,-0.3 -1,-0.2 0.819 113.4 53.3 -54.5 -33.4 6.2 -4.1 6.1 57 57 A K H X S+ 0 0 95 -4,-2.8 4,-1.0 -5,-0.4 -1,-0.3 0.886 109.9 46.7 -69.1 -40.4 8.8 -4.1 3.3 58 58 A K H >X S+ 0 0 104 -4,-2.7 4,-1.3 -3,-0.3 3,-0.6 0.923 111.9 50.5 -66.6 -46.0 8.6 -7.9 3.1 59 59 A L H >X S+ 0 0 41 -4,-3.1 4,-4.2 1,-0.3 3,-0.8 0.930 101.5 61.6 -56.8 -48.8 4.8 -7.8 3.2 60 60 A A H 3X S+ 0 0 0 -4,-2.4 4,-2.6 1,-0.3 -1,-0.3 0.848 103.5 51.9 -45.3 -39.1 4.8 -5.3 0.4 61 61 A E H S+ 0 0 143 -4,-0.4 4,-0.9 -3,-0.3 -1,-0.2 0.975 112.0 32.4 -66.2 -57.3 -1.0 -10.0 -9.2 69 69 A V H >X S+ 0 0 57 -4,-1.0 4,-3.3 -3,-0.3 3,-1.0 0.892 112.4 64.7 -66.3 -41.0 -3.0 -13.2 -9.1 70 70 A H H 3X S+ 0 0 64 -4,-3.6 4,-2.5 1,-0.3 -1,-0.2 0.874 97.8 56.0 -48.4 -42.4 -5.9 -11.3 -7.5 71 71 A L H 3X S+ 0 0 60 -4,-1.6 4,-0.8 -5,-0.3 -1,-0.3 0.871 111.8 42.7 -58.4 -38.5 -6.1 -9.3 -10.7 72 72 A D H - 0 0 60 1,-0.1 4,-2.4 4,-0.1 5,-0.3 0.152 30.2 -95.7 -52.5 178.8 -18.3 -12.0 -17.3 80 80 A P T 4 S+ 0 0 95 0, 0.0 4,-0.2 0, 0.0 -1,-0.1 0.635 127.9 44.9 -75.0 -14.9 -18.0 -13.2 -20.9 81 81 A Q T > S+ 0 0 159 2,-0.1 4,-0.7 3,-0.1 -3,-0.1 0.823 116.7 42.0 -94.2 -40.9 -18.7 -9.6 -22.0 82 82 A D H >> S+ 0 0 94 2,-0.2 4,-2.8 1,-0.2 3,-1.6 0.958 115.5 48.6 -70.3 -53.4 -16.4 -7.9 -19.5 83 83 A R H 3X S+ 0 0 109 -4,-2.4 4,-2.7 1,-0.3 5,-0.3 0.855 104.8 61.1 -54.2 -37.8 -13.5 -10.3 -19.8 84 84 A A H 3> S+ 0 0 67 -5,-0.3 4,-0.8 -4,-0.2 -1,-0.3 0.806 112.9 38.4 -59.3 -30.0 -13.9 -10.0 -23.6 85 85 A A H XX S+ 0 0 38 -3,-1.6 4,-1.1 -4,-0.7 3,-0.7 0.950 111.7 53.3 -83.6 -61.3 -13.1 -6.3 -23.1 86 86 A Y H >X S+ 0 0 48 -4,-2.8 4,-1.4 1,-0.3 3,-0.9 0.852 110.3 51.1 -40.2 -46.2 -10.5 -6.5 -20.4 87 87 A K H 3X S+ 0 0 123 -4,-2.7 4,-2.1 1,-0.3 5,-0.4 0.909 96.1 68.8 -60.0 -44.1 -8.6 -8.9 -22.6 88 88 A E H