==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 03-FEB-04 1V9V . COMPND 2 MOLECULE: KIAA0561 PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 114 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7705.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 91 79.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 1.8 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 17 14.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 64 56.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 132 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 73.0 17.1 6.5 -14.4 2 2 A S - 0 0 100 1,-0.1 2,-0.1 3,-0.0 52,-0.0 0.085 360.0-108.3 -56.8 176.4 16.0 3.3 -16.2 3 3 A S S S- 0 0 123 1,-0.0 -1,-0.1 0, 0.0 0, 0.0 -0.280 70.5 -74.9-105.3 45.7 18.1 1.8 -18.9 4 4 A G S S- 0 0 76 1,-0.1 2,-0.2 -2,-0.1 -1,-0.0 0.992 70.8-179.5 61.3 79.8 15.8 2.7 -21.8 5 5 A S - 0 0 75 1,-0.0 2,-0.1 3,-0.0 -1,-0.1 -0.500 40.7-108.2-104.2 175.1 12.9 0.3 -21.5 6 6 A S S S- 0 0 128 1,-0.3 -1,-0.0 -2,-0.2 -2,-0.0 -0.198 73.6 -83.3 -96.2 41.5 9.7 -0.1 -23.6 7 7 A G - 0 0 39 -2,-0.1 -1,-0.3 5,-0.0 2,-0.1 0.381 60.0 -64.9 71.5 148.8 7.5 1.3 -20.9 8 8 A P + 0 0 67 0, 0.0 3,-0.1 0, 0.0 49,-0.1 -0.428 47.3 174.2 -69.7 138.7 6.0 -0.6 -17.9 9 9 A K > + 0 0 195 48,-0.4 3,-0.6 1,-0.3 2,-0.4 0.799 63.2 38.9-107.4 -66.1 3.6 -3.4 -18.6 10 10 A A T 3 S+ 0 0 44 47,-0.3 -1,-0.3 1,-0.2 49,-0.3 -0.750 130.1 2.2 -93.8 135.8 2.7 -5.2 -15.4 11 11 A T T 3> S+ 0 0 61 -2,-0.4 4,-1.7 -3,-0.1 -1,-0.2 0.785 88.2 138.7 62.4 27.4 2.2 -3.3 -12.1 12 12 A A H <> + 0 0 26 -3,-0.6 4,-1.8 2,-0.2 5,-0.3 0.977 60.5 58.7 -65.7 -57.7 2.9 -0.1 -14.1 13 13 A Q H > S+ 0 0 128 1,-0.3 4,-0.8 -4,-0.2 -1,-0.2 0.858 108.7 48.2 -38.7 -47.2 0.2 2.1 -12.5 14 14 A M H >> S+ 0 0 4 1,-0.2 3,-1.5 2,-0.2 4,-1.4 0.940 105.0 58.6 -62.0 -49.2 1.9 1.4 -9.2 15 15 A E H 3X S+ 0 0 20 -4,-1.7 4,-1.7 1,-0.3 -2,-0.2 0.930 96.5 61.0 -45.4 -58.2 5.4 2.3 -10.6 16 16 A G H 3X S+ 0 0 37 -4,-1.8 4,-1.2 1,-0.2 -1,-0.3 0.808 103.8 53.6 -40.0 -37.0 4.2 5.8 -11.6 17 17 A R H XX S+ 0 0 108 -3,-1.5 4,-2.0 -4,-0.8 3,-1.1 0.985 101.5 53.6 -64.5 -60.7 3.5 6.4 -7.9 18 18 A L H 3X S+ 0 0 0 -4,-1.4 4,-1.5 1,-0.3 -1,-0.2 0.799 105.2 60.3 -44.5 -31.9 7.0 5.4 -6.6 19 19 A Q H 3X S+ 0 0 106 -4,-1.7 4,-2.1 1,-0.2 -1,-0.3 0.934 106.1 43.2 -64.0 -47.7 8.3 7.9 -9.1 20 20 A E H > - 0 0 12 -2,-0.5 4,-1.2 -3,-0.2 5,-1.1 -0.983 43.2-125.9-129.6 125.2 14.8 13.5 -2.1 27 27 A P B 45S-a 31 0A 41 0, 0.0 2,-2.3 0, 0.0 5,-0.2 -0.507 88.7 -18.8 -69.8 123.5 17.7 13.8 0.3 28 28 A G T 45S+ 0 0 57 3,-2.7 4,-0.1 -2,-0.3 -2,-0.0 -0.229 121.7 85.6 76.2 -52.0 19.9 16.8 -0.5 29 29 A A T 45S- 0 0 83 -2,-2.3 -1,-0.2 1,-0.1 3,-0.1 0.763 120.0 -5.4 -51.4 -25.6 18.5 17.0 -4.0 30 30 A R T <5S- 0 0 135 -4,-1.2 2,-0.2 1,-0.6 -1,-0.1 0.498 130.8 -4.2-131.0 -74.6 15.8 19.1 -2.3 31 31 A L B < -a 27 0A 67 -5,-1.1 -3,-2.7 2,-0.0 -1,-0.6 -0.640 55.0-158.8-121.4 179.6 15.8 19.4 1.4 32 32 A A - 0 0 82 -2,-0.2 2,-0.6 -5,-0.2 3,-0.1 -0.983 14.3-136.8-160.7 150.5 17.8 18.0 4.4 33 33 A L - 0 0 48 -2,-0.3 6,-0.2 2,-0.2 -2,-0.0 -0.922 14.0-144.1-117.4 108.3 17.6 17.4 8.1 34 34 A A S S+ 0 0 115 -2,-0.6 2,-0.1 4,-0.1 -1,-0.1 0.779 76.2 106.8 -35.2 -34.1 20.6 18.3 10.2 35 35 A D > - 0 0 49 1,-0.1 4,-1.1 -3,-0.1 -2,-0.2 -0.316 58.4-163.2 -54.5 117.8 19.6 15.3 12.2 36 36 A G H > S+ 0 0 57 2,-0.2 4,-1.8 -2,-0.1 -1,-0.1 0.998 82.8 34.0 -67.8 -68.0 22.1 12.6 11.4 37 37 A V H >> S+ 0 0 39 1,-0.2 3,-1.7 2,-0.2 4,-0.6 0.973 117.6 52.0 -51.2 -67.7 20.3 9.4 12.7 38 38 A L H >> S+ 0 0 0 41,-0.4 3,-1.5 1,-0.3 4,-0.7 0.851 110.6 51.2 -37.2 -47.1 16.8 10.6 11.8 39 39 A G H 3X S+ 0 0 18 -4,-1.1 4,-2.3 1,-0.3 3,-0.4 0.861 88.8 78.3 -62.3 -36.4 18.0 11.3 8.3 40 40 A F H X S+ 0 0 53 -4,-1.2 4,-2.3 -5,-0.4 3,-0.6 0.992 116.9 42.1 -63.0 -64.0 17.8 4.6 3.3 45 45 A I H >X S+ 0 0 0 -4,-2.8 4,-2.5 1,-0.3 3,-0.6 0.954 110.3 55.7 -47.1 -65.2 14.1 4.5 2.4 46 46 A V H 3X S+ 0 0 11 -4,-1.5 4,-1.3 -5,-0.4 -1,-0.3 0.825 112.0 46.4 -37.3 -41.5 14.4 6.8 -0.6 47 47 A E H X>S+ 0 0 63 -4,-2.1 3,-2.3 -5,-0.2 5,-1.9 0.993 109.8 45.2 -71.0 -66.1 11.7 -4.6 -9.9 56 56 A S H ><5S+ 0 0 0 -4,-3.0 3,-1.2 1,-0.3 -46,-0.2 0.858 106.2 64.4 -46.0 -40.7 8.0 -4.0 -10.7 57 57 A G H 3<5S+ 0 0 20 -4,-2.6 -48,-0.4 -5,-0.3 -1,-0.3 0.835 117.3 26.4 -54.0 -34.7 9.2 -2.9 -14.2 58 58 A E H <<5S- 0 0 119 -3,-2.3 -1,-0.3 -4,-0.7 -2,-0.2 0.234 117.3-108.0-111.8 10.0 10.5 -6.4 -14.8 59 59 A N T <<5S+ 0 0 99 -3,-1.2 -3,-0.3 -4,-0.7 -4,-0.1 0.914 77.0 135.4 63.9 44.3 8.0 -8.1 -12.4 60 60 A L < + 0 0 87 -5,-1.9 2,-0.3 -8,-0.2 -4,-0.2 0.665 40.4 96.0 -93.9 -20.8 10.7 -8.8 -9.8 61 61 A V + 0 0 16 -9,-0.2 2,-0.2 -8,-0.1 3,-0.0 -0.566 53.5 170.3 -75.1 128.3 8.6 -7.7 -6.8 62 62 A T > - 0 0 79 -2,-0.3 4,-1.9 1,-0.1 5,-0.2 -0.792 50.0 -86.1-131.6 174.2 6.9 -10.5 -5.1 63 63 A S H > S+ 0 0 90 -2,-0.2 4,-2.4 1,-0.2 5,-0.2 0.929 128.3 43.6 -44.3 -59.7 4.9 -11.2 -1.9 64 64 A R H > S+ 0 0 187 1,-0.2 4,-3.1 2,-0.2 5,-0.5 0.944 105.5 63.2 -52.9 -54.1 8.1 -11.8 0.2 65 65 A Y H > S+ 0 0 46 1,-0.2 4,-2.8 2,-0.2 -1,-0.2 0.884 112.7 35.0 -36.1 -59.9 9.9 -8.8 -1.4 66 66 A F H X S+ 0 0 23 -4,-1.9 4,-3.0 2,-0.2 5,-0.3 0.986 112.5 57.9 -61.7 -62.0 7.3 -6.4 0.1 67 67 A L H X S+ 0 0 91 -4,-2.4 4,-1.2 1,-0.3 -1,-0.2 0.848 117.9 35.5 -35.2 -49.4 6.7 -8.3 3.4 68 68 A E H X S+ 0 0 82 -4,-3.1 4,-2.1 2,-0.2 -1,-0.3 0.885 112.8 58.5 -75.4 -40.6 10.4 -8.0 4.0 69 69 A M H X S+ 0 0 4 -4,-2.8 4,-1.3 -5,-0.5 -2,-0.2 0.785 104.8 54.2 -59.4 -27.3 10.7 -4.6 2.5 70 70 A Q H X S+ 0 0 63 -4,-3.0 4,-3.1 2,-0.2 -1,-0.2 0.919 110.8 42.0 -73.4 -45.7 8.1 -3.4 5.0 71 71 A E H X S+ 0 0 116 -4,-1.2 4,-1.3 -5,-0.3 -2,-0.2 0.757 112.2 57.2 -72.4 -24.9 10.0 -4.6 8.0 72 72 A K H X S+ 0 0 124 -4,-2.1 4,-0.6 2,-0.2 -1,-0.2 0.855 118.9 29.5 -73.7 -36.2 13.3 -3.3 6.5 73 73 A L H X S+ 0 0 0 -4,-1.3 4,-1.2 -5,-0.2 -2,-0.2 0.845 116.8 58.0 -90.3 -40.8 11.9 0.2 6.2 74 74 A E H >< S+ 0 0 99 -4,-3.1 3,-1.3 1,-0.2 4,-0.4 0.956 103.8 52.2 -53.7 -56.8 9.5 0.1 9.2 75 75 A R H >< S+ 0 0 190 -4,-1.3 3,-3.1 1,-0.3 4,-0.3 0.912 100.6 62.3 -46.2 -51.6 12.2 -0.7 11.7 76 76 A L H >X S+ 0 0 24 -4,-0.6 3,-2.7 1,-0.3 4,-0.5 0.856 82.1 81.0 -43.5 -41.8 14.3 2.2 10.5 77 77 A L H XX S+ 0 0 40 -3,-1.3 4,-2.1 -4,-1.2 3,-1.6 0.780 77.5 73.7 -36.2 -33.5 11.5 4.5 11.6 78 78 A Q H <> S+ 0 0 70 -3,-3.1 4,-2.5 -4,-0.4 -1,-0.3 0.912 81.7 66.2 -49.6 -48.9 13.1 4.0 15.1 79 79 A D H <>>S+ 0 0 17 -3,-2.7 4,-1.3 -4,-0.3 5,-0.6 0.827 110.5 38.2 -42.7 -37.3 15.9 6.3 14.0 80 80 A A H <<5S+ 0 0 0 -3,-1.6 -2,-0.2 -4,-0.5 -1,-0.2 0.953 118.3 44.2 -80.3 -56.4 13.3 9.1 14.0 81 81 A H H <5S+ 0 0 110 -4,-2.1 -2,-0.2 1,-0.2 -3,-0.2 0.581 112.7 61.1 -65.5 -7.7 11.1 8.1 17.0 82 82 A E H <5S- 0 0 120 -4,-2.5 -1,-0.2 -5,-0.3 -2,-0.2 0.961 129.2 -11.2 -82.3 -63.2 14.5 7.5 18.7 83 83 A R T <5S+ 0 0 129 -4,-1.3 -3,-0.2 -5,-0.2 6,-0.1 0.824 115.3 73.8-101.8 -76.0 16.0 11.0 18.6 84 84 A S S > - 0 0 109 1,-0.1 4,-3.2 4,-0.0 3,-1.0 -0.622 32.2 -93.5 -98.7 158.9 10.8 14.7 17.7 86 86 A S H 3> S+ 0 0 98 1,-0.3 4,-2.9 -2,-0.2 5,-0.1 0.795 127.6 59.8 -36.5 -35.9 7.4 13.9 16.3 87 87 A E H 3> S+ 0 0 152 2,-0.2 4,-0.7 1,-0.2 -1,-0.3 0.965 113.6 32.0 -60.4 -55.5 7.9 17.2 14.4 88 88 A E H <> S+ 0 0 79 -3,-1.0 4,-1.0 1,-0.2 3,-0.4 0.856 120.8 52.9 -71.1 -36.0 11.0 16.0 12.5 89 89 A V H X S+ 0 0 6 -4,-3.2 4,-3.2 1,-0.2 5,-0.3 0.874 93.2 72.2 -66.9 -38.2 9.7 12.4 12.5 90 90 A S H X S+ 0 0 64 -4,-2.9 4,-1.7 -5,-0.4 -1,-0.2 0.872 97.3 51.1 -43.7 -45.1 6.4 13.5 10.9 91 91 A F H X S+ 0 0 49 -4,-0.7 4,-0.9 -3,-0.4 -1,-0.2 0.959 115.0 40.2 -59.4 -54.3 8.3 14.1 7.7 92 92 A I H >X S+ 0 0 0 -4,-1.0 3,-2.0 1,-0.2 4,-1.5 0.966 107.4 62.0 -59.9 -56.0 10.0 10.7 7.6 93 93 A V H 3X S+ 0 0 39 -4,-3.2 4,-2.8 1,-0.3 5,-0.4 0.864 98.3 58.1 -35.9 -53.5 6.9 8.8 8.8 94 94 A Q H 3X S+ 0 0 74 -4,-1.7 4,-3.1 -5,-0.3 -1,-0.3 0.872 111.3 43.4 -47.5 -42.2 5.1 9.9 5.7 95 95 A L H X S+ 0 0 158 -4,-2.8 3,-1.4 -5,-0.3 4,-1.4 0.972 113.1 51.5 -75.8 -59.3 4.4 4.7 5.4 98 98 A K H >X S+ 0 0 70 -4,-3.1 4,-1.6 -5,-0.4 3,-1.2 0.900 104.4 59.3 -43.4 -51.6 3.8 6.0 1.8 99 99 A L H 3X S+ 0 0 0 -4,-3.1 4,-2.4 1,-0.3 3,-0.3 0.864 106.1 48.5 -47.1 -41.1 6.4 3.5 0.5 100 100 A L H