==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 07-FEB-04 1VA1 . COMPND 2 MOLECULE: TRANSCRIPTION FACTOR SP1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.OKA,Y.SHIRAISHI,T.YOSHIDA,T.OHKUBO,Y.SUGIURA,Y.KOBAYASHI . 37 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4119.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 21 56.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 8.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 10.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 10.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 24.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 217 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 118.2 -6.3 -14.4 -9.6 2 530 A D + 0 0 161 4,-0.0 0, 0.0 0, 0.0 0, 0.0 0.985 360.0 46.4 -68.9 -60.7 -5.9 -12.1 -12.6 3 531 A P S S+ 0 0 104 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.034 87.3 56.1 -71.8-174.9 -9.7 -11.8 -13.6 4 532 A G S S- 0 0 58 2,-0.0 2,-0.1 0, 0.0 0, 0.0 -0.355 101.4 -7.8 86.0-169.0 -12.6 -11.2 -11.3 5 533 A K S S- 0 0 206 -2,-0.1 2,-0.2 1,-0.1 0, 0.0 -0.398 72.2-134.9 -64.8 134.4 -13.1 -8.3 -8.9 6 534 A K - 0 0 153 -2,-0.1 2,-0.4 0, 0.0 -1,-0.1 -0.532 13.0-148.8 -90.1 157.9 -10.1 -6.0 -8.6 7 535 A K - 0 0 191 -2,-0.2 2,-0.2 14,-0.1 0, 0.0 -0.983 5.1-140.5-130.7 140.2 -8.6 -4.6 -5.4 8 536 A Q - 0 0 135 -2,-0.4 2,-0.9 1,-0.0 13,-0.2 -0.634 21.9-116.2 -97.1 156.1 -6.8 -1.4 -4.7 9 537 A H E +A 20 0A 45 11,-2.5 11,-1.5 -2,-0.2 2,-0.3 -0.795 42.2 171.9 -95.5 101.9 -3.8 -0.9 -2.4 10 538 A I E -A 19 0A 77 -2,-0.9 2,-1.2 9,-0.2 9,-0.1 -0.851 44.2-100.4-112.0 146.9 -4.9 1.4 0.5 11 539 A C - 0 0 19 7,-0.5 4,-0.2 -2,-0.3 5,-0.1 -0.478 33.6-171.8 -66.1 96.3 -2.9 2.3 3.6 12 540 A H + 0 0 189 -2,-1.2 -1,-0.2 2,-0.1 2,-0.1 0.810 58.4 100.1 -59.3 -30.3 -4.5 -0.1 6.2 13 541 A I S > S- 0 0 78 1,-0.1 3,-1.0 -3,-0.1 2,-0.7 -0.377 90.1-109.0 -61.6 129.3 -2.5 1.7 8.9 14 542 A Q T 3 S+ 0 0 203 1,-0.2 -1,-0.1 -2,-0.1 -2,-0.1 -0.457 102.0 44.5 -63.5 106.2 -4.7 4.3 10.7 15 543 A G T 3 S+ 0 0 76 -2,-0.7 -1,-0.2 1,-0.6 -3,-0.1 -0.171 95.2 66.8 156.4 -53.1 -3.3 7.6 9.5 16 544 A C < - 0 0 54 -3,-1.0 -1,-0.6 -5,-0.1 -6,-0.0 -0.016 45.4-175.7 -82.8-168.4 -2.7 7.6 5.8 17 545 A G + 0 0 65 -3,-0.1 2,-0.1 2,-0.0 -1,-0.0 0.195 34.8 126.6 176.3 38.5 -5.3 7.5 3.0 18 546 A K - 0 0 79 1,-0.0 -7,-0.5 -9,-0.0 2,-0.4 -0.233 51.9-112.5 -96.2-172.1 -3.6 7.3 -0.4 19 547 A V E -A 10 0A 102 -9,-0.1 2,-0.3 -2,-0.1 -9,-0.2 -0.978 27.8-179.1-129.4 140.4 -4.0 4.8 -3.3 20 548 A Y E -A 9 0A 57 -11,-1.5 -11,-2.5 -2,-0.4 3,-0.1 -0.954 19.4-172.7-136.5 155.0 -1.5 2.3 -4.7 21 549 A G S S+ 0 0 62 -2,-0.3 2,-0.4 1,-0.2 -1,-0.1 0.654 72.4 59.7-116.8 -28.7 -1.5 -0.2 -7.6 22 550 A K >> - 0 0 143 1,-0.1 4,-0.6 -13,-0.1 3,-0.6 -0.876 63.4-150.0-108.6 137.2 1.7 -2.2 -7.1 23 551 A T H >> S+ 0 0 95 -2,-0.4 4,-1.1 1,-0.2 3,-0.9 0.819 96.1 68.2 -70.6 -31.6 2.5 -4.1 -4.0 24 552 A S H 3> S+ 0 0 96 1,-0.3 4,-1.1 2,-0.2 -1,-0.2 0.817 97.2 54.3 -57.3 -30.6 6.3 -3.5 -4.5 25 553 A H H <> S+ 0 0 102 -3,-0.6 4,-2.2 1,-0.2 -1,-0.3 0.788 95.5 67.8 -74.0 -28.3 5.5 0.2 -3.7 26 554 A L H < S+ 0 0 102 -4,-2.4 2,-2.2 1,-0.2 3,-0.7 0.906 108.7 69.7 -77.5 -44.7 7.7 2.6 10.5 35 563 A G T 3< S+ 0 0 38 -4,-2.5 -1,-0.2 -5,-0.3 -4,-0.0 -0.471 73.6 93.7 -77.0 75.1 10.9 4.6 10.0 36 564 A E T 3 0 0 119 -2,-2.2 -1,-0.2 -3,-0.1 -2,-0.1 0.603 360.0 360.0-128.7 -46.5 9.8 7.8 11.8 37 565 A R < 0 0 300 -3,-0.7 -2,-0.1 0, 0.0 -3,-0.1 0.181 360.0 360.0-136.8 360.0 11.0 7.6 15.4