==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 07-FEB-04 1VA2 . COMPND 2 MOLECULE: TRANSCRIPTION FACTOR SP1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.OKA,Y.SHIRAISHI,T.YOSHIDA,T.OHKUBO,Y.SUGIURA,Y.KOBAYASHI . 31 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3166.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 16 51.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 9.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 9.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 25.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 565 A R 0 0 202 0, 0.0 2,-1.2 0, 0.0 13,-0.2 0.000 360.0 360.0 360.0 115.5 -6.1 5.9 -9.7 2 566 A P + 0 0 119 0, 0.0 2,-0.4 0, 0.0 13,-0.1 -0.214 360.0 106.8 -83.2 46.9 -8.1 3.5 -7.5 3 567 A F E +A 14 0A 55 -2,-1.2 11,-2.8 11,-0.6 2,-0.4 -0.808 37.6 147.1-129.4 91.2 -5.0 2.3 -5.6 4 568 A M E -A 13 0A 113 -2,-0.4 9,-0.2 9,-0.2 2,-0.0 -0.989 45.2-119.4-129.3 133.2 -4.8 3.6 -2.0 5 569 A C - 0 0 16 7,-0.9 7,-0.2 -2,-0.4 6,-0.1 -0.348 16.4-135.0 -66.8 146.1 -3.4 1.9 1.0 6 570 A T S S+ 0 0 104 14,-0.1 2,-0.6 4,-0.1 -1,-0.1 0.789 76.2 107.0 -73.1 -28.0 -5.8 1.3 3.9 7 571 A W > - 0 0 83 1,-0.2 4,-1.1 2,-0.1 3,-0.4 -0.354 53.4-167.5 -56.4 103.8 -3.2 2.5 6.4 8 572 A S T >4 S+ 0 0 117 -2,-0.6 3,-0.5 1,-0.2 -1,-0.2 0.924 87.5 53.9 -60.3 -46.3 -4.7 5.9 7.4 9 573 A Y T 34 S+ 0 0 233 1,-0.2 -1,-0.2 2,-0.1 -2,-0.1 0.788 99.1 67.0 -59.3 -27.7 -1.5 6.9 9.2 10 574 A C T 34 S- 0 0 37 -3,-0.4 -1,-0.2 2,-0.1 -2,-0.2 0.940 77.4-171.3 -59.1 -50.2 0.3 6.1 6.0 11 575 A G << + 0 0 69 -4,-1.1 2,-0.3 -3,-0.5 -3,-0.1 0.964 37.8 122.1 53.7 59.9 -1.3 9.0 4.0 12 576 A K - 0 0 117 -5,-0.3 -7,-0.9 -7,-0.2 -1,-0.2 -0.929 48.9-146.8-155.4 126.7 -0.0 7.9 0.6 13 577 A R E -A 4 0A 184 -2,-0.3 2,-0.3 -9,-0.2 -9,-0.2 -0.462 15.0-152.3 -89.5 163.6 -1.8 7.1 -2.6 14 578 A F E -A 3 0A 12 -11,-2.8 -11,-0.6 -13,-0.2 3,-0.1 -0.896 20.4-154.3-134.3 163.8 -0.6 4.5 -5.2 15 579 A T S S+ 0 0 89 -2,-0.3 2,-0.4 1,-0.2 -1,-0.1 0.546 82.6 52.6-111.6 -15.6 -0.9 3.9 -8.9 16 580 A R > - 0 0 180 -13,-0.1 4,-1.0 1,-0.1 3,-0.4 -0.979 66.8-144.8-127.6 137.1 -0.4 0.1 -9.0 17 581 A S H > S+ 0 0 58 -2,-0.4 4,-1.6 1,-0.2 3,-0.2 0.881 101.8 62.1 -63.0 -38.9 -2.2 -2.5 -6.9 18 582 A D H > S+ 0 0 117 1,-0.2 4,-2.3 2,-0.2 5,-0.3 0.849 96.0 61.5 -55.8 -36.8 1.0 -4.5 -6.7 19 583 A E H > S+ 0 0 74 -3,-0.4 4,-4.6 1,-0.2 5,-0.4 0.957 103.0 47.5 -55.4 -55.4 2.6 -1.7 -4.8 20 584 A L H X S+ 0 0 10 -4,-1.0 4,-2.5 1,-0.2 5,-0.4 0.861 109.3 56.0 -56.4 -36.9 0.1 -1.8 -1.9 21 585 A Q H X S+ 0 0 99 -4,-1.6 4,-1.0 2,-0.2 -1,-0.2 0.975 120.5 28.2 -59.4 -56.4 0.6 -5.6 -1.7 22 586 A R H < S+ 0 0 163 -4,-2.3 4,-0.4 2,-0.2 -2,-0.2 0.888 124.7 48.6 -72.7 -42.2 4.3 -5.4 -1.3 23 587 A H H >< S+ 0 0 33 -4,-4.6 3,-1.7 -5,-0.3 -3,-0.2 0.965 115.8 42.8 -64.5 -50.4 4.3 -1.9 0.4 24 588 A K H >X S+ 0 0 40 -4,-2.5 3,-2.6 -5,-0.4 4,-0.5 0.817 97.4 80.5 -62.6 -28.4 1.6 -2.9 2.9 25 589 A R T 3< S+ 0 0 157 -4,-1.0 -1,-0.3 -5,-0.4 -2,-0.2 0.754 108.7 25.1 -48.2 -27.5 3.5 -6.2 3.2 26 590 A T T <4 S+ 0 0 105 -3,-1.7 -1,-0.3 -4,-0.4 -2,-0.2 0.050 87.8 111.2-127.3 23.9 5.8 -4.3 5.5 27 591 A H T <4 S+ 0 0 47 -3,-2.6 2,-0.3 1,-0.2 -2,-0.1 0.810 91.9 4.8 -67.9 -29.2 3.4 -1.6 6.8 28 592 A T S < S- 0 0 79 -4,-0.5 2,-0.2 -3,-0.1 -1,-0.2 -0.982 120.4 -5.2-152.0 159.6 3.4 -3.2 10.2 29 593 A G S S- 0 0 79 -2,-0.3 -3,-0.0 1,-0.1 0, 0.0 -0.374 86.2 -96.8 59.2-119.0 5.1 -6.0 12.1 30 594 A E 0 0 165 -2,-0.2 -1,-0.1 -5,-0.0 -3,-0.0 0.254 360.0 360.0-163.3 -44.7 7.3 -8.0 9.7 31 595 A K 0 0 210 -5,-0.0 -2,-0.1 0, 0.0 -5,-0.0 0.650 360.0 360.0 60.1 360.0 5.5 -11.0 8.4