==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 07-FEB-04 1VA3 . COMPND 2 MOLECULE: TRANSCRIPTION FACTOR SP1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.OKA,Y.SHIRAISHI,T.YOSHIDA,T.OHKUBO,Y.SUGIURA,Y.KOBAYASHI . 29 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3196.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 14 48.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 6.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 10.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 27.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 595 A K 0 0 185 0, 0.0 2,-1.5 0, 0.0 11,-0.0 0.000 360.0 360.0 360.0 160.7 0.1 3.3 -12.6 2 596 A K + 0 0 212 2,-0.0 2,-0.2 9,-0.0 11,-0.1 -0.594 360.0 173.1 -88.8 77.3 3.0 4.7 -10.6 3 597 A F + 0 0 45 -2,-1.5 2,-0.3 9,-0.3 12,-0.0 -0.500 7.7 177.4 -84.8 155.0 1.9 3.6 -7.1 4 598 A A - 0 0 69 -2,-0.2 7,-0.2 7,-0.1 6,-0.1 -0.886 28.4-124.3-161.9 126.1 4.1 4.0 -4.0 5 599 A C - 0 0 11 5,-1.4 -2,-0.0 -2,-0.3 13,-0.0 -0.543 11.2-151.0 -73.5 130.1 3.5 3.3 -0.3 6 600 A P S S+ 0 0 113 0, 0.0 -1,-0.1 0, 0.0 16,-0.0 0.519 97.8 47.3 -77.9 -4.9 4.0 6.3 1.9 7 601 A E S S+ 0 0 110 1,-0.1 -2,-0.0 3,-0.1 15,-0.0 0.682 121.3 22.6-105.6 -27.3 5.1 3.9 4.8 8 602 A C S S- 0 0 27 2,-0.2 -1,-0.1 1,-0.0 -3,-0.0 -0.824 71.3-120.5-134.1 172.9 7.5 1.7 2.8 9 603 A P S S+ 0 0 100 0, 0.0 -1,-0.0 0, 0.0 0, 0.0 0.607 77.6 108.6 -89.9 -14.5 9.7 1.9 -0.3 10 604 A K - 0 0 126 -6,-0.1 -5,-1.4 1,-0.0 2,-0.3 -0.209 52.3-161.1 -61.8 154.2 8.0 -1.1 -1.9 11 605 A R - 0 0 172 -7,-0.2 2,-0.4 0, 0.0 -7,-0.1 -0.986 9.9-157.9-140.8 149.9 5.7 -0.5 -4.9 12 606 A F - 0 0 65 -2,-0.3 -9,-0.3 2,-0.2 6,-0.1 -0.993 19.4-143.9-133.0 129.7 3.0 -2.4 -6.7 13 607 A M S S+ 0 0 155 -2,-0.4 2,-0.2 -11,-0.1 -1,-0.1 0.755 89.8 66.0 -59.1 -24.1 1.8 -1.9 -10.3 14 608 A R - 0 0 160 1,-0.1 -2,-0.2 -3,-0.0 4,-0.1 -0.586 63.9-160.0 -98.4 162.0 -1.7 -2.7 -8.9 15 609 A S S > S+ 0 0 60 -2,-0.2 4,-0.6 2,-0.1 -1,-0.1 0.640 83.4 70.4-111.0 -25.9 -3.8 -0.6 -6.5 16 610 A D H >> S+ 0 0 111 1,-0.2 3,-1.1 2,-0.2 4,-0.6 0.927 103.3 43.7 -58.4 -47.6 -6.3 -3.3 -5.3 17 611 A H H >> S+ 0 0 114 1,-0.3 4,-2.0 2,-0.2 3,-0.8 0.820 100.6 70.5 -68.0 -31.3 -3.5 -5.1 -3.4 18 612 A L H 3> S+ 0 0 9 1,-0.2 4,-2.6 2,-0.2 5,-0.3 0.729 90.0 64.9 -58.1 -21.2 -2.3 -1.8 -2.1 19 613 A S H < S+ 0 0 167 -4,-1.4 3,-0.9 -5,-0.3 -1,-0.2 0.955 105.5 42.2 -59.1 -53.2 -4.3 -1.3 5.7 24 618 A T H 3< S+ 0 0 113 -4,-1.5 -1,-0.2 1,-0.2 -2,-0.2 0.784 102.6 71.6 -65.0 -27.3 -1.9 -3.4 7.8 25 619 A H H 3< S+ 0 0 58 -4,-1.1 -1,-0.2 -5,-0.1 2,-0.2 0.857 97.6 56.9 -56.9 -36.8 0.6 -0.5 7.7 26 620 A Q S << S- 0 0 131 -4,-1.1 2,-0.3 -3,-0.9 -19,-0.0 -0.619 71.2-164.3 -96.9 157.3 -1.7 1.4 10.0 27 621 A N - 0 0 110 -2,-0.2 2,-0.8 2,-0.0 -3,-0.0 -0.971 25.6-111.2-140.5 154.4 -2.9 0.4 13.5 28 622 A K 0 0 206 -2,-0.3 -2,-0.0 0, 0.0 0, 0.0 -0.769 360.0 360.0 -90.2 108.8 -5.6 1.5 15.9 29 623 A K 0 0 244 -2,-0.8 -2,-0.0 0, 0.0 0, 0.0 -0.758 360.0 360.0-116.6 360.0 -4.1 3.1 19.0