==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIPID BINDING PROTEIN 20-FEB-04 1VAZ . COMPND 2 MOLECULE: NSFL1 COFACTOR P47; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR X.YUAN,P.SIMPSON,C.MCKEOWN,H.KONDO,K.UCHIYAMA,R.WALLIS, . 76 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5678.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 67.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 7 9.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 9.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 14.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 6 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A E 0 0 221 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-142.3 5.3 -22.0 14.4 2 2 A R + 0 0 232 1,-0.1 2,-0.2 2,-0.0 3,-0.1 -0.093 360.0 135.8 -42.6 135.7 2.4 -23.7 12.6 3 3 A R + 0 0 169 1,-0.1 -1,-0.1 2,-0.0 0, 0.0 -0.780 19.8 94.7-159.5-155.8 2.6 -22.7 8.9 4 4 A R + 0 0 222 -2,-0.2 -1,-0.1 2,-0.1 3,-0.1 0.963 50.2 134.5 58.1 50.8 2.3 -24.1 5.3 5 5 A H S S+ 0 0 175 1,-0.3 2,-0.3 -3,-0.1 -1,-0.1 0.604 70.4 2.1-104.7 -15.3 -1.4 -23.2 5.0 6 6 A S - 0 0 80 1,-0.1 -1,-0.3 0, 0.0 -2,-0.1 -0.991 52.4-146.3-163.8 159.7 -1.3 -21.7 1.5 7 7 A G S S+ 0 0 72 -2,-0.3 -1,-0.1 -3,-0.1 -2,-0.1 0.853 77.5 65.3 -97.4 -75.7 1.1 -21.0 -1.4 8 8 A Q S S- 0 0 174 1,-0.1 2,-0.3 2,-0.0 0, 0.0 0.029 71.7-158.6 -42.5 158.1 0.2 -17.7 -3.1 9 9 A D - 0 0 90 2,-0.1 2,-1.1 53,-0.0 -1,-0.1 -0.958 23.3-108.6-142.3 161.1 0.6 -14.6 -0.9 10 10 A V + 0 0 4 -2,-0.3 52,-1.5 50,-0.1 2,-0.4 -0.738 53.1 153.9 -93.8 97.5 -0.7 -11.0 -0.8 11 11 A H E +a 62 0A 108 -2,-1.1 2,-0.3 50,-0.1 52,-0.2 -0.944 7.5 154.7-125.2 146.3 2.2 -8.8 -1.7 12 12 A V E -a 63 0A 4 50,-1.9 52,-1.7 -2,-0.4 2,-0.5 -0.982 32.7-128.1-159.1 168.0 2.2 -5.3 -3.3 13 13 A V E -a 64 0A 48 -2,-0.3 11,-1.8 50,-0.3 2,-0.5 -0.962 19.7-174.8-129.9 119.8 4.3 -2.1 -3.6 14 14 A L E -a 65 0A 0 50,-0.7 52,-1.3 -2,-0.5 9,-0.3 -0.939 11.1-153.3-116.5 122.7 3.0 1.4 -2.8 15 15 A K E -a 66 0A 39 -2,-0.5 7,-2.8 7,-0.3 2,-0.6 -0.644 11.0-138.5 -90.8 148.6 5.1 4.5 -3.5 16 16 A L E -aB 67 21A 19 50,-1.5 52,-0.6 5,-0.3 5,-0.3 -0.891 17.8-166.0-111.9 112.7 4.5 7.6 -1.4 17 17 A W E > - B 0 20A 34 3,-4.9 3,-0.5 -2,-0.6 52,-0.2 -0.388 46.9 -82.0 -87.3 170.3 4.5 11.0 -3.3 18 18 A K T 3 S- 0 0 63 54,-1.0 56,-0.1 55,-0.6 55,-0.1 0.882 124.6 -7.2 -38.4 -50.4 4.8 14.4 -1.6 19 19 A T T 3 S+ 0 0 60 54,-0.3 12,-1.5 50,-0.1 2,-0.3 0.079 133.1 59.2-137.4 25.0 1.0 14.3 -1.0 20 20 A G E < -BC 17 30A 0 -3,-0.5 -3,-4.9 10,-0.2 2,-0.4 -0.995 61.8-147.8-151.1 153.0 -0.1 11.2 -2.9 21 21 A F E -BC 16 29A 0 8,-1.6 8,-2.3 -2,-0.3 -5,-0.3 -0.978 11.1-159.2-127.4 137.9 0.7 7.5 -2.8 22 22 A S E - C 0 28A 15 -7,-2.8 -7,-0.3 -2,-0.4 2,-0.2 -0.525 1.5-159.5-106.5 177.6 0.8 5.0 -5.7 23 23 A L > - 0 0 6 1,-0.6 3,-0.7 4,-0.6 -9,-0.2 -0.751 53.0 -43.6-161.0 108.4 0.5 1.2 -5.9 24 24 A D T 3 S- 0 0 75 -11,-1.8 -1,-0.6 1,-0.2 -9,-0.1 0.006 112.4 -30.9 58.6-175.1 1.6 -1.1 -8.7 25 25 A N T 3 S+ 0 0 164 -3,-0.1 -1,-0.2 0, 0.0 0, 0.0 0.796 112.6 115.2 -43.7 -26.0 0.8 -0.1 -12.3 26 26 A G S < S- 0 0 19 -3,-0.7 -3,-0.3 1,-0.1 3,-0.1 0.065 77.2 -99.8 -40.9 160.4 -2.2 1.5 -10.7 27 27 A D - 0 0 126 1,-0.1 -4,-0.6 -5,-0.1 2,-0.4 -0.079 51.4 -70.5 -76.6-175.7 -2.3 5.3 -11.0 28 28 A L E -C 22 0A 70 -6,-0.2 2,-0.2 -8,-0.0 -6,-0.2 -0.635 49.7-144.2 -80.5 129.1 -1.3 7.8 -8.3 29 29 A R E -C 21 0A 68 -8,-2.3 -8,-1.6 -2,-0.4 2,-0.5 -0.640 15.4-118.0 -92.4 150.7 -3.8 7.8 -5.4 30 30 A S E > -C 20 0A 55 -2,-0.2 3,-3.2 -10,-0.2 6,-0.3 -0.740 15.2-130.0 -89.7 128.1 -4.6 11.1 -3.5 31 31 A Y T 3 S+ 0 0 62 -12,-1.5 -1,-0.1 -2,-0.5 -11,-0.1 0.784 117.6 37.8 -45.8 -21.8 -3.7 11.0 0.3 32 32 A Q T 3 S+ 0 0 184 -13,-0.3 -1,-0.3 3,-0.0 -12,-0.1 0.442 98.3 105.6-109.0 -2.3 -7.3 12.3 0.6 33 33 A D S < S- 0 0 78 -3,-3.2 -4,-0.1 1,-0.1 -13,-0.0 0.147 83.3-101.0 -63.0-169.3 -8.8 10.1 -2.2 34 34 A P S > S+ 0 0 89 0, 0.0 3,-4.0 0, 0.0 4,-0.3 0.954 115.8 54.7 -83.2 -62.8 -11.0 7.1 -1.5 35 35 A S T >> S+ 0 0 44 1,-0.3 4,-1.8 2,-0.2 3,-0.6 0.806 94.3 75.5 -44.1 -26.9 -8.6 4.1 -2.0 36 36 A N H 3>>S+ 0 0 20 -6,-0.3 4,-2.2 1,-0.2 5,-0.6 0.638 74.8 83.6 -63.6 -7.6 -6.4 5.9 0.6 37 37 A A H <>5S+ 0 0 64 -3,-4.0 4,-1.5 1,-0.2 -1,-0.2 0.991 106.0 21.7 -60.3 -57.7 -9.0 4.7 3.1 38 38 A Q H <>>S+ 0 0 60 -3,-0.6 4,-4.0 -4,-0.3 5,-0.8 0.843 124.2 58.9 -79.7 -30.6 -7.4 1.2 3.5 39 39 A F H X>S+ 0 0 0 -4,-1.8 4,-1.7 3,-0.2 5,-0.9 0.997 111.2 38.7 -60.8 -61.2 -4.0 2.5 2.2 40 40 A L H X5S+ 0 0 46 -4,-2.2 4,-1.1 3,-0.2 -1,-0.2 0.942 125.7 40.4 -54.8 -47.0 -3.6 5.2 4.9 41 41 A E H XS+ 0 0 0 -4,-4.0 4,-5.1 2,-0.2 5,-1.4 0.985 119.4 52.3 -72.0 -57.8 -3.3 -0.4 6.3 43 43 A I H <> S+ 0 0 42 2,-0.1 4,-1.6 3,-0.1 3,-1.4 0.866 122.3 46.3-101.1 -63.6 -5.9 -3.2 -2.9 51 51 A E H 3>>S+ 0 0 32 1,-0.3 4,-1.8 2,-0.2 5,-0.7 0.778 111.6 57.7 -54.2 -22.7 -3.9 -6.4 -2.6 52 52 A L H 34>S+ 0 0 0 -4,-0.4 5,-4.9 2,-0.2 6,-0.3 0.827 100.6 54.7 -79.8 -27.7 -5.1 -6.7 1.0 53 53 A R H <45S+ 0 0 167 -3,-1.4 -2,-0.2 3,-0.3 -1,-0.2 0.887 108.3 50.9 -71.6 -33.2 -8.7 -6.7 -0.0 54 54 A R H <5S- 0 0 141 -4,-1.6 -2,-0.2 2,-0.1 -1,-0.2 0.985 138.5 -2.0 -66.3 -56.7 -8.0 -9.6 -2.3 55 55 A L T <5S+ 0 0 76 -4,-1.8 -3,-0.2 5,-0.0 -2,-0.1 0.865 134.2 50.7-100.8 -60.5 -6.2 -11.8 0.3 56 56 A A T + 0 0 55 -2,-0.9 4,-0.5 -52,-0.6 -50,-0.3 -0.269 15.0 133.7-158.9 61.5 10.5 9.1 -3.3 69 69 A R T >4 S+ 0 0 76 2,-0.2 3,-0.8 -52,-0.2 -51,-0.6 0.974 85.7 28.9 -79.8 -62.9 9.0 12.3 -1.7 70 70 A D T 34 S+ 0 0 119 1,-0.2 -1,-0.2 -53,-0.1 4,-0.1 0.334 128.4 48.2 -80.1 11.8 11.3 15.0 -3.0 71 71 A E T 34 S+ 0 0 154 1,-0.2 2,-0.4 2,-0.1 -1,-0.2 0.429 107.6 52.6-128.0 -4.3 11.9 12.9 -6.1 72 72 A D S << S- 0 0 35 -3,-0.8 -54,-1.0 -4,-0.5 3,-0.2 -0.983 112.4 -2.9-135.7 146.9 8.4 11.9 -7.2 73 73 A F S S- 0 0 81 -2,-0.4 2,-1.7 1,-0.2 -55,-0.6 0.927 70.6-161.5 39.5 70.7 5.2 13.8 -7.8 74 74 A V + 0 0 76 1,-0.2 -1,-0.2 -3,-0.1 -4,-0.1 -0.572 16.8 176.1 -83.7 85.1 6.6 17.2 -6.9 75 75 A K 0 0 118 -2,-1.7 -1,-0.2 -3,-0.2 -2,-0.1 0.917 360.0 360.0 -54.4 -43.0 3.4 19.2 -6.3 76 76 A P 0 0 123 0, 0.0 -1,-0.1 0, 0.0 -58,-0.0 -0.691 360.0 360.0 -79.0 360.0 5.6 22.1 -5.2