==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 31-AUG-07 2VAJ . COMPND 2 MOLECULE: NEURAL CELL ADHESION MOLECULE 2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR N.KULAHIN,K.K.RASMUSSEN,O.KRISTENSEN,J.S.KASTRUP, . 93 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6508.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 63.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 6.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 31 33.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 14.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 1 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A L 0 0 217 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 124.3 -6.6 3.1 51.9 2 2 A Q - 0 0 94 2,-0.0 2,-0.4 23,-0.0 23,-0.0 -0.992 360.0-168.5-121.1 124.2 -4.1 3.1 49.0 3 3 A V + 0 0 116 -2,-0.4 2,-0.4 2,-0.0 0, 0.0 -0.919 8.6 173.4-114.3 134.0 -5.5 2.2 45.6 4 4 A T - 0 0 90 -2,-0.4 2,-0.6 2,-0.0 -2,-0.0 -0.999 23.4-152.4-141.7 142.5 -3.4 1.3 42.5 5 5 A I + 0 0 160 -2,-0.4 2,-0.3 2,-0.0 -2,-0.0 -0.947 28.1 176.6-107.3 117.4 -4.1 0.1 39.0 6 6 A S - 0 0 108 -2,-0.6 2,-0.3 81,-0.0 -2,-0.0 -0.901 19.0-139.4-124.6 154.5 -1.1 -1.8 37.5 7 7 A L - 0 0 113 -2,-0.3 81,-0.1 1,-0.1 3,-0.1 -0.860 9.6-145.5-112.8 145.6 -0.4 -3.6 34.3 8 8 A S S S+ 0 0 109 -2,-0.3 80,-1.7 1,-0.3 2,-0.3 0.924 86.8 0.8 -65.1 -47.5 1.5 -6.9 33.6 9 9 A K E -a 88 0A 74 78,-0.2 2,-0.4 61,-0.0 -1,-0.3 -0.994 63.1-154.2-150.1 141.6 2.9 -5.8 30.3 10 10 A V E -a 89 0A 21 78,-2.9 80,-2.3 -2,-0.3 2,-0.5 -0.968 11.2-143.5-124.3 139.8 2.8 -2.7 28.2 11 11 A E E -a 90 0A 103 -2,-0.4 2,-0.3 78,-0.2 80,-0.2 -0.898 19.0-173.2-103.6 132.3 3.2 -2.4 24.4 12 12 A L E -a 91 0A 0 78,-3.1 80,-3.0 -2,-0.5 2,-0.4 -0.918 17.7-134.7-121.8 148.9 5.0 0.6 23.0 13 13 A S E > -a 92 0A 23 -2,-0.3 3,-2.5 78,-0.2 50,-0.2 -0.812 41.2 -91.0-100.0 143.6 5.5 1.6 19.4 14 14 A V T 3 S+ 0 0 59 78,-1.8 50,-0.2 -2,-0.4 3,-0.1 -0.283 116.4 23.2 -53.4 127.8 9.0 2.8 18.2 15 15 A G T 3 S+ 0 0 40 48,-2.8 47,-0.4 1,-0.4 -1,-0.3 0.050 99.1 113.4 102.4 -24.5 9.2 6.6 18.7 16 16 A E < - 0 0 63 -3,-2.5 47,-3.8 46,-0.2 -1,-0.4 -0.201 52.2-150.2 -71.6 167.5 6.5 6.6 21.3 17 17 A S + 0 0 59 45,-0.2 2,-0.3 44,-0.2 44,-0.2 -0.997 16.3 172.6-142.6 145.0 7.2 7.6 25.0 18 18 A K E -E 60 0B 85 42,-2.0 42,-2.7 -2,-0.3 2,-0.3 -0.996 20.4-137.7-150.2 149.9 5.5 6.6 28.2 19 19 A F E -E 59 0B 103 -2,-0.3 2,-0.4 40,-0.3 40,-0.3 -0.876 11.3-157.0-111.3 149.1 6.0 6.9 32.0 20 20 A F E -E 58 0B 26 38,-2.8 38,-2.3 -2,-0.3 2,-0.5 -0.971 7.9-147.7-122.4 134.0 5.6 4.3 34.7 21 21 A T E -E 57 0B 63 -2,-0.4 2,-0.4 36,-0.2 36,-0.2 -0.911 9.1-165.4-109.4 126.5 4.9 5.1 38.3 22 22 A a E -E 56 0B 16 34,-2.4 34,-2.1 -2,-0.5 2,-0.4 -0.912 6.4-168.3-108.6 134.4 6.2 2.8 41.1 23 23 A T E -E 55 0B 41 -2,-0.4 2,-0.6 32,-0.2 32,-0.2 -0.978 10.8-161.2-128.1 130.1 4.8 3.1 44.6 24 24 A A - 0 0 15 30,-1.4 2,-0.6 -2,-0.4 52,-0.0 -0.931 8.4-160.3-111.0 109.2 6.1 1.6 47.8 25 25 A I + 0 0 120 -2,-0.6 2,-0.3 2,-0.1 -2,-0.0 -0.810 64.0 53.3 -90.5 122.7 3.6 1.5 50.6 26 26 A G S S- 0 0 57 -2,-0.6 -2,-0.1 2,-0.1 0, 0.0 -0.942 116.9 -55.2 147.9-157.5 5.4 1.1 53.9 27 27 A E S S- 0 0 190 -2,-0.3 51,-0.3 0, 0.0 -2,-0.1 -0.396 70.4-176.3-109.6 56.0 8.2 3.3 55.2 28 28 A P - 0 0 34 0, 0.0 49,-0.3 0, 0.0 3,-0.1 -0.204 18.7-169.1 -57.2 134.8 10.4 2.8 52.1 29 29 A E S S+ 0 0 134 47,-3.0 2,-0.3 1,-0.3 48,-0.2 0.823 70.8 14.7 -93.6 -37.6 13.8 4.4 52.3 30 30 A S E -B 76 0A 51 46,-1.9 46,-2.2 2,-0.0 2,-0.4 -0.980 54.5-168.8-138.6 151.2 14.8 4.0 48.6 31 31 A I E +B 75 0A 29 -2,-0.3 2,-0.3 44,-0.2 44,-0.2 -0.968 17.6 175.9-138.4 121.1 13.1 3.1 45.3 32 32 A D E -B 74 0A 38 42,-2.3 42,-2.5 -2,-0.4 2,-0.4 -0.891 23.0-133.0-127.3 155.4 15.2 2.3 42.2 33 33 A W E -B 73 0A 11 -2,-0.3 8,-3.1 8,-0.3 2,-0.5 -0.891 14.3-159.8-107.6 138.2 14.5 1.1 38.7 34 34 A Y E -BC 72 40A 38 38,-2.8 38,-2.3 -2,-0.4 6,-0.2 -0.970 14.0-137.0-119.2 127.1 16.4 -1.7 37.0 35 35 A N > - 0 0 26 4,-2.3 3,-2.6 -2,-0.5 4,-0.1 -0.233 39.6 -87.9 -78.2 169.6 16.5 -2.0 33.2 36 36 A P T 3 S+ 0 0 39 0, 0.0 34,-0.2 0, 0.0 -1,-0.1 0.347 125.5 58.8 -65.0 10.8 16.0 -5.3 31.4 37 37 A Q T 3 S- 0 0 120 2,-0.2 34,-0.1 32,-0.1 -2,-0.0 0.368 120.2-100.4-120.2 1.0 19.8 -5.9 31.6 38 38 A G S < S+ 0 0 46 -3,-2.6 2,-0.4 1,-0.3 33,-0.0 0.326 79.5 126.5 107.0 -3.7 20.1 -5.8 35.4 39 39 A E - 0 0 131 -4,-0.1 -4,-2.3 1,-0.1 -1,-0.3 -0.731 65.8-112.7-102.7 132.0 21.4 -2.2 35.8 40 40 A K B -C 34 0A 102 -2,-0.4 2,-0.4 -6,-0.2 -6,-0.3 -0.354 43.3-116.1 -54.2 124.6 20.0 0.5 38.0 41 41 A I - 0 0 25 -8,-3.1 2,-0.5 -2,-0.1 -8,-0.3 -0.518 26.4-159.5 -70.8 123.6 18.7 3.1 35.5 42 42 A I - 0 0 121 -2,-0.4 5,-0.1 6,-0.0 -1,-0.0 -0.911 34.0-100.7-100.7 127.0 20.5 6.5 35.7 43 43 A S + 0 0 56 -2,-0.5 5,-0.3 6,-0.2 2,-0.2 -0.165 49.1 173.7 -45.1 130.4 18.5 9.4 34.3 44 44 A T - 0 0 84 3,-2.6 5,-0.1 -3,-0.0 -1,-0.1 -0.359 51.5 -86.1-113.9-154.9 19.7 10.3 30.8 45 45 A Q S S+ 0 0 187 -2,-0.2 3,-0.2 1,-0.1 -2,-0.1 0.645 128.3 31.3 -85.7 -14.4 18.2 12.8 28.3 46 46 A R S S+ 0 0 68 1,-0.3 15,-3.4 15,-0.1 2,-0.5 0.605 121.5 44.1-124.3 -26.3 15.8 10.1 27.0 47 47 A V E S+F 60 0B 17 13,-0.2 -3,-2.6 -5,-0.1 2,-0.4 -0.913 74.6 179.5-127.4 105.5 15.1 7.9 30.0 48 48 A V E -F 59 0B 31 11,-1.9 11,-3.5 -2,-0.5 2,-0.4 -0.825 18.0-164.7-109.5 140.9 14.5 9.9 33.1 49 49 A V E -F 58 0B 37 -2,-0.4 2,-0.5 9,-0.2 9,-0.2 -0.984 9.7-178.0-123.5 121.8 13.7 8.9 36.7 50 50 A Q E -F 57 0B 73 7,-1.9 7,-2.1 -2,-0.4 2,-0.5 -0.972 20.8-139.9-120.4 115.9 12.3 11.5 39.1 51 51 A K E -F 56 0B 175 -2,-0.5 2,-0.4 5,-0.2 5,-0.3 -0.638 15.4-170.8 -79.5 124.2 11.6 10.5 42.6 52 52 A E E > -F 55 0B 89 3,-3.4 2,-0.6 -2,-0.5 3,-0.6 -0.531 52.4 -83.1-116.3 62.8 8.4 12.2 43.8 53 53 A G T 3 S+ 0 0 62 -2,-0.4 -1,-0.1 1,-0.2 0, 0.0 -0.662 115.7 5.3 77.5-119.4 8.4 11.4 47.5 54 54 A V T 3 S+ 0 0 80 -2,-0.6 -30,-1.4 -3,-0.1 2,-0.3 0.408 130.7 64.4 -80.8 1.9 7.0 8.0 48.2 55 55 A R E < -EF 23 52B 92 -3,-0.6 -3,-3.4 -32,-0.2 2,-0.4 -0.925 65.4-153.6-126.8 152.0 6.8 7.4 44.4 56 56 A S E -EF 22 51B 1 -34,-2.1 -34,-2.4 -2,-0.3 2,-0.6 -0.992 10.1-150.6-127.1 132.0 9.4 7.1 41.6 57 57 A R E -EF 21 50B 71 -7,-2.1 -7,-1.9 -2,-0.4 2,-0.6 -0.891 6.3-167.8-108.2 117.6 8.6 8.0 38.0 58 58 A L E -EF 20 49B 1 -38,-2.3 -38,-2.8 -2,-0.6 2,-0.6 -0.911 10.1-170.0 -98.2 118.2 10.5 6.2 35.2 59 59 A T E -EF 19 48B 8 -11,-3.5 -11,-1.9 -2,-0.6 2,-0.7 -0.944 7.4-162.4-111.7 118.5 9.9 8.0 31.9 60 60 A I E -EF 18 47B 1 -42,-2.7 -42,-2.0 -2,-0.6 3,-0.3 -0.887 14.5-164.2 -96.3 115.1 11.0 6.3 28.7 61 61 A Y + 0 0 102 -15,-3.4 -44,-0.2 -2,-0.7 -45,-0.1 -0.640 62.7 2.9 -95.2 156.1 11.2 8.8 25.8 62 62 A N S S- 0 0 100 -47,-0.4 -1,-0.2 -2,-0.2 -45,-0.2 0.855 88.8-141.3 39.0 60.0 11.4 8.1 22.1 63 63 A A - 0 0 1 -47,-3.8 -48,-2.8 -3,-0.3 2,-0.3 -0.094 20.1-166.6 -54.2 144.8 11.2 4.3 22.6 64 64 A N > - 0 0 53 -50,-0.2 3,-2.5 -3,-0.1 4,-0.3 -0.896 38.3 -98.6-130.1 162.3 13.3 2.0 20.4 65 65 A I G > S+ 0 0 118 -2,-0.3 3,-0.5 1,-0.3 26,-0.2 0.661 119.4 61.0 -54.7 -17.7 13.2 -1.8 19.8 66 66 A E G 3 S+ 0 0 150 1,-0.2 -1,-0.3 3,-0.0 -3,-0.0 0.598 85.0 74.1 -89.2 -11.6 16.1 -2.2 22.3 67 67 A D G < S+ 0 0 17 -3,-2.5 -1,-0.2 -32,-0.0 -2,-0.2 0.628 73.9 115.9 -73.9 -12.9 14.1 -0.8 25.2 68 68 A A < + 0 0 38 -3,-0.5 22,-0.2 -4,-0.3 2,-0.2 -0.018 44.7 68.7 -50.6 159.1 12.1 -4.1 25.2 69 69 A G E S- D 0 89A 24 20,-3.0 20,-3.8 -34,-0.1 2,-0.5 -0.668 84.9 -42.1 125.2-178.2 12.3 -6.3 28.3 70 70 A I E - D 0 88A 92 18,-0.2 2,-0.4 -2,-0.2 18,-0.2 -0.777 47.1-161.4 -90.9 130.0 11.4 -6.6 32.0 71 71 A Y E - D 0 87A 9 16,-3.3 16,-2.1 -2,-0.5 2,-0.4 -0.896 6.0-151.9-109.2 143.0 11.8 -3.6 34.1 72 72 A R E -BD 34 86A 65 -38,-2.3 -38,-2.8 -2,-0.4 2,-0.4 -0.922 9.2-160.0-113.1 137.3 12.0 -3.8 37.9 73 73 A a E -BD 33 85A 4 12,-3.1 12,-2.1 -2,-0.4 2,-0.4 -0.948 19.8-168.3-102.9 138.5 11.1 -1.3 40.5 74 74 A Q E -BD 32 84A 32 -42,-2.5 -42,-2.3 -2,-0.4 2,-0.3 -0.968 6.7-163.4-137.4 120.6 12.8 -2.1 43.8 75 75 A A E -BD 31 83A 15 8,-3.1 8,-1.4 -2,-0.4 2,-0.4 -0.692 3.0-162.5-103.3 153.8 12.0 -0.6 47.2 76 76 A T E -BD 30 82A 31 -46,-2.2 -47,-3.0 -2,-0.3 -46,-1.9 -0.967 5.4-152.6-141.7 117.6 14.3 -0.8 50.3 77 77 A D > - 0 0 49 4,-2.4 3,-1.2 -2,-0.4 6,-0.0 -0.200 42.2 -92.8 -78.9-179.0 13.3 -0.1 53.9 78 78 A A T 3 S+ 0 0 77 -51,-0.3 -1,-0.1 1,-0.3 -2,-0.0 0.582 121.5 60.9 -81.7 -8.0 15.9 1.2 56.4 79 79 A K T 3 S- 0 0 180 2,-0.1 -1,-0.3 3,-0.0 3,-0.1 -0.024 120.2-104.6-102.1 26.0 17.0 -2.3 57.7 80 80 A G S < S+ 0 0 57 -3,-1.2 2,-0.4 1,-0.2 -2,-0.1 0.554 74.4 142.0 70.5 11.0 18.1 -3.1 54.2 81 81 A Q - 0 0 120 1,-0.0 -4,-2.4 2,-0.0 -1,-0.2 -0.705 34.7-153.7 -88.7 136.1 15.2 -5.4 53.4 82 82 A T E + D 0 76A 74 -2,-0.4 2,-0.3 -6,-0.2 -6,-0.2 -0.508 20.1 179.2-109.1 173.8 13.8 -5.2 49.8 83 83 A Q E - D 0 75A 147 -8,-1.4 -8,-3.1 -2,-0.2 2,-0.3 -0.917 15.6-167.9-166.8 150.1 10.6 -5.8 47.8 84 84 A E E - D 0 74A 91 -2,-0.3 2,-0.3 -10,-0.2 -10,-0.2 -0.953 20.1-154.4-149.3 162.8 9.9 -5.3 44.1 85 85 A A E - D 0 73A 60 -12,-2.1 -12,-3.1 -2,-0.3 2,-0.4 -0.995 18.3-153.0-136.2 141.2 7.4 -5.1 41.2 86 86 A T E - D 0 72A 73 -2,-0.3 2,-0.4 -14,-0.2 -14,-0.2 -0.960 8.1-171.5-123.0 135.0 8.2 -5.9 37.6 87 87 A V E - D 0 71A 24 -16,-2.1 -16,-3.3 -2,-0.4 2,-0.5 -0.926 20.3-132.7-119.0 145.7 6.6 -4.6 34.4 88 88 A V E -aD 9 70A 50 -80,-1.7 -78,-2.9 -2,-0.4 2,-0.5 -0.869 15.2-156.9-105.0 121.8 7.2 -6.0 30.9 89 89 A L E -aD 10 69A 3 -20,-3.8 -20,-3.0 -2,-0.5 2,-0.4 -0.840 9.4-174.8-102.4 126.6 8.0 -3.7 28.0 90 90 A E E -a 11 0A 74 -80,-2.3 -78,-3.1 -2,-0.5 2,-0.5 -0.939 10.0-154.6-113.4 142.7 7.4 -4.7 24.4 91 91 A I E -a 12 0A 24 -2,-0.4 2,-0.3 -26,-0.2 -78,-0.2 -0.968 12.3-165.7-118.9 119.8 8.3 -2.6 21.4 92 92 A Y E a 13 0A 107 -80,-3.0 -78,-1.8 -2,-0.5 -2,-0.0 -0.746 360.0 360.0-108.6 155.6 6.4 -3.1 18.1 93 93 A Q 0 0 204 -2,-0.3 -2,-0.1 -80,-0.2 -80,-0.0 -0.523 360.0 360.0 82.3 360.0 7.2 -1.9 14.6