==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CONTRACTILE PROTEIN 22-MAR-04 1VDJ . COMPND 2 MOLECULE: TROPONIN I, FAST SKELETAL MUSCLE; . SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; . AUTHOR K.MURAKAMI,F.YUMOTO,S.OHKI,T.YASUNAGA,M.TANOKURA, . 52 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5207.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 35 67.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 5.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 5.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 44.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 131 A K > 0 0 184 0, 0.0 4,-2.4 0, 0.0 3,-0.5 0.000 360.0 360.0 360.0 61.3 -23.8 -1.5 -2.7 2 132 A V H > + 0 0 108 1,-0.2 4,-3.2 2,-0.2 5,-0.3 0.901 360.0 69.1 -54.1 -44.1 -23.7 2.2 -3.3 3 133 A N H > S+ 0 0 102 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.898 109.0 34.4 -38.7 -58.1 -22.5 2.6 0.2 4 134 A M H >>S+ 0 0 76 -3,-0.5 4,-2.9 2,-0.2 5,-0.6 0.941 110.6 62.5 -64.6 -50.2 -19.2 1.0 -0.7 5 135 A D H X5S+ 0 0 103 -4,-2.4 4,-2.0 1,-0.3 -1,-0.2 0.860 111.3 41.3 -42.1 -43.6 -19.2 2.4 -4.2 6 136 A L H X5S+ 0 0 113 -4,-3.2 4,-2.4 2,-0.2 5,-0.3 0.937 113.5 53.0 -71.1 -49.1 -19.0 5.8 -2.5 7 137 A R H X5S+ 0 0 178 -4,-2.3 4,-1.8 -5,-0.3 3,-0.2 0.958 116.5 37.1 -49.0 -63.8 -16.5 4.6 0.1 8 138 A A H <5S+ 0 0 41 -4,-2.9 -1,-0.2 1,-0.2 -2,-0.2 0.909 108.9 67.1 -56.0 -45.0 -14.1 3.3 -2.4 9 139 A N H < + 0 0 32 1,-0.2 4,-2.1 2,-0.1 6,-0.2 -0.004 33.4 104.3 33.3 -94.5 -3.7 -1.3 -1.2 28 158 A G H > S- 0 0 46 -3,-0.4 4,-1.6 1,-0.3 -1,-0.2 0.024 106.9 -4.2 31.5 -96.8 -2.9 -4.8 -2.5 29 159 A D H > S+ 0 0 121 -3,-0.2 4,-2.8 2,-0.2 -1,-0.3 0.943 135.6 58.4 -82.7 -57.0 -1.7 -3.8 -5.9 30 160 A W H > S+ 0 0 37 1,-0.2 4,-2.2 2,-0.2 5,-0.2 0.885 115.9 39.7 -37.1 -54.2 -2.3 -0.0 -5.7 31 161 A R H X>S+ 0 0 89 -4,-2.1 4,-2.2 2,-0.2 5,-0.7 0.995 106.0 60.5 -60.3 -68.8 -0.0 -0.1 -2.7 32 162 A K H X5S+ 0 0 107 -4,-1.6 4,-1.5 1,-0.2 5,-0.3 0.783 112.7 44.9 -26.1 -46.1 2.6 -2.5 -3.9 33 163 A N H X5S+ 0 0 80 -4,-2.8 4,-3.4 -6,-0.2 3,-0.2 0.999 126.8 25.1 -64.8 -75.4 3.1 0.1 -6.6 34 164 A I H X5S+ 0 0 30 -4,-2.2 4,-1.5 1,-0.2 -2,-0.2 0.962 118.1 62.0 -53.4 -58.7 3.1 3.3 -4.6 35 165 A E H <5S+ 0 0 73 -4,-2.2 -1,-0.2 -5,-0.2 -3,-0.2 0.844 118.3 29.7 -33.0 -53.7 4.2 1.5 -1.5 36 166 A E H XXS+ 0 0 98 -4,-1.5 4,-0.7 -5,-0.7 5,-0.5 0.985 122.8 48.2 -73.1 -63.7 7.4 0.5 -3.4 37 167 A K H X>S+ 0 0 121 -4,-3.4 4,-3.2 -5,-0.3 5,-0.5 0.921 100.7 72.7 -39.2 -75.4 7.7 3.5 -5.7 38 168 A S H <5S+ 0 0 30 -4,-1.5 2,-1.9 1,-0.2 3,-0.3 0.089 105.5 14.6 -39.6 156.5 7.2 6.1 -3.1 39 169 A G H >5S+ 0 0 30 1,-0.3 4,-2.2 2,-0.1 5,-0.2 -0.548 129.9 47.0 75.9 -83.9 10.1 6.6 -0.7 40 170 A M H X5S+ 0 0 125 -2,-1.9 4,-2.4 -4,-0.7 3,-0.5 0.944 116.5 43.8 -52.6 -55.8 12.7 4.8 -2.7 41 171 A E H XX S+ 0 0 149 -4,-2.4 4,-1.6 2,-0.2 3,-0.7 0.972 115.8 39.0 -59.5 -57.9 16.4 8.3 -6.4 45 175 A K H 3< S+ 0 0 141 -4,-2.7 -1,-0.2 1,-0.3 -2,-0.2 0.876 115.3 54.8 -59.8 -39.1 14.7 11.3 -8.0 46 176 A M H 3< S+ 0 0 116 -4,-1.8 -1,-0.3 -5,-0.3 -2,-0.2 0.745 122.1 29.9 -65.9 -24.3 15.8 13.4 -5.0 47 177 A F H << + 0 0 142 -4,-1.4 3,-0.3 -3,-0.7 -2,-0.2 0.857 62.6 143.5 -96.3 -80.4 19.3 12.2 -5.7 48 178 A E < - 0 0 132 -4,-1.6 -3,-0.1 1,-0.2 -4,-0.1 0.842 53.1-141.5 36.0 47.6 20.0 11.5 -9.4 49 179 A A + 0 0 104 -5,-0.1 -1,-0.2 2,-0.0 2,-0.1 -0.129 67.1 67.9 -40.7 105.7 23.5 12.9 -8.7 50 180 A G S S- 0 0 56 -3,-0.3 2,-0.3 2,-0.0 0, 0.0 -0.200 77.9-114.7 140.3 127.9 24.0 14.8 -12.0 51 181 A E 0 0 194 1,-0.2 -3,-0.0 -2,-0.1 -2,-0.0 -0.602 360.0 360.0 -85.1 144.0 22.5 17.8 -13.7 52 182 A S 0 0 175 -2,-0.3 -1,-0.2 0, 0.0 -2,-0.0 0.600 360.0 360.0 39.5 360.0 20.5 17.5 -16.9