==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 31-MAR-04 1VEK . COMPND 2 MOLECULE: UBIQUITIN-SPECIFIC PROTEASE 14, PUTATIVE; . SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; . AUTHOR Y.HIGUCHI,T.ABE,H.HIROTA,K.SAITO,S.KOSHIBA,T.KIGAWA, . 84 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6805.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 48.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 28.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 138 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 155.9 22.0 -8.4 47.8 2 2 A S - 0 0 125 1,-0.1 0, 0.0 2,-0.1 0, 0.0 -0.994 360.0-177.7-149.8 144.0 23.7 -9.4 44.6 3 3 A S - 0 0 122 -2,-0.3 -1,-0.1 2,-0.0 0, 0.0 0.826 19.9-170.8-103.9 -59.4 22.8 -9.5 40.9 4 4 A G + 0 0 60 1,-0.2 2,-0.2 0, 0.0 -2,-0.1 0.845 17.5 153.2 62.5 111.8 25.8 -11.0 39.1 5 5 A S + 0 0 118 2,-0.0 2,-0.2 0, 0.0 -1,-0.2 -0.691 10.2 119.3-172.7 113.6 25.7 -10.8 35.4 6 6 A S + 0 0 126 -2,-0.2 2,-0.3 2,-0.0 0, 0.0 -0.674 20.1 148.3 179.2 122.3 28.5 -10.7 32.8 7 7 A G - 0 0 86 -2,-0.2 2,-0.4 0, 0.0 -2,-0.0 -0.986 28.5-139.8-158.0 157.7 29.5 -12.9 30.0 8 8 A G + 0 0 67 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.989 19.6 168.1-128.4 132.4 31.1 -12.8 26.5 9 9 A E - 0 0 192 -2,-0.4 -1,-0.1 2,-0.0 3,-0.0 0.772 25.5-173.5-105.4 -43.1 30.2 -14.9 23.5 10 10 A E + 0 0 165 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 0.394 45.4 51.0 58.8 155.9 32.2 -13.1 20.8 11 11 A L S S- 0 0 170 2,-0.0 -2,-0.0 1,-0.0 0, 0.0 0.435 84.1-101.7 60.9 150.6 31.8 -14.0 17.1 12 12 A L - 0 0 143 1,-0.1 -1,-0.0 -3,-0.0 0, 0.0 -0.721 31.2-112.0-105.7 156.6 28.4 -14.1 15.4 13 13 A P - 0 0 86 0, 0.0 2,-0.8 0, 0.0 -1,-0.1 -0.040 35.3 -96.2 -75.0-177.4 26.3 -17.2 14.6 14 14 A D S S- 0 0 167 2,-0.1 2,-1.1 0, 0.0 0, 0.0 -0.818 87.5 -42.0-107.6 91.2 25.5 -18.5 11.1 15 15 A G S S- 0 0 73 -2,-0.8 5,-0.0 2,-0.1 0, 0.0 -0.765 118.5 -18.6 96.6 -92.0 22.1 -17.2 10.2 16 16 A V - 0 0 62 -2,-1.1 2,-0.5 5,-0.0 -2,-0.1 -0.960 63.4-115.3-156.1 135.0 20.0 -17.5 13.3 17 17 A P S S- 0 0 94 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 -0.596 84.9 -14.7 -75.0 121.0 20.4 -19.6 16.5 18 18 A E S S+ 0 0 156 -2,-0.5 0, 0.0 0, 0.0 0, 0.0 0.522 117.2 49.8 61.2 143.9 17.5 -22.1 16.7 19 19 A E S S- 0 0 152 1,-0.1 2,-0.2 2,-0.0 0, 0.0 0.912 79.4-132.5 59.6 102.1 14.4 -21.8 14.6 20 20 A V - 0 0 119 1,-0.1 -1,-0.1 -5,-0.0 -5,-0.0 -0.571 23.4-105.2 -84.8 147.9 15.4 -21.4 11.0 21 21 A M - 0 0 147 -2,-0.2 2,-0.2 1,-0.1 -1,-0.1 -0.313 34.2-148.7 -70.3 154.5 13.7 -18.7 8.9 22 22 A E - 0 0 169 2,-0.1 2,-0.8 -2,-0.0 -1,-0.1 -0.722 30.9 -81.3-120.3 170.6 11.1 -19.6 6.3 23 23 A S S S+ 0 0 111 -2,-0.2 0, 0.0 1,-0.1 0, 0.0 -0.637 75.4 121.4 -76.6 108.1 10.0 -18.2 3.0 24 24 A A + 0 0 91 -2,-0.8 -2,-0.1 2,-0.1 -1,-0.1 -0.352 29.5 130.5-169.1 75.4 7.7 -15.3 3.8 25 25 A Q - 0 0 142 1,-0.1 26,-0.0 29,-0.0 -2,-0.0 -0.936 50.5-109.7-133.9 155.9 8.7 -11.9 2.4 26 26 A P - 0 0 47 0, 0.0 2,-0.4 0, 0.0 25,-0.1 -0.118 26.6-135.3 -75.0 176.7 7.1 -9.1 0.4 27 27 A V - 0 0 93 24,-0.1 2,-1.7 23,-0.1 21,-0.0 -0.999 23.8-109.0-140.5 134.3 7.8 -8.2 -3.2 28 28 A A - 0 0 9 -2,-0.4 20,-0.1 22,-0.1 19,-0.1 -0.422 46.5-130.3 -62.9 88.2 8.3 -4.8 -4.8 29 29 A N > - 0 0 56 -2,-1.7 4,-1.8 18,-0.2 5,-0.2 -0.042 3.2-138.6 -41.1 139.9 5.0 -4.8 -6.7 30 30 A E H > S+ 0 0 133 2,-0.2 4,-2.3 3,-0.2 -1,-0.2 0.742 103.5 50.1 -75.9 -24.8 5.5 -3.9 -10.3 31 31 A E H > S+ 0 0 130 2,-0.2 4,-1.6 3,-0.2 -1,-0.2 0.912 113.5 42.4 -78.1 -46.8 2.5 -1.7 -10.2 32 32 A I H > S+ 0 0 9 2,-0.2 4,-1.9 1,-0.2 -2,-0.2 0.856 122.5 42.0 -67.3 -36.2 3.4 0.2 -7.1 33 33 A V H X S+ 0 0 7 -4,-1.8 4,-4.6 2,-0.2 5,-0.4 0.941 111.3 52.8 -74.7 -50.9 7.0 0.4 -8.4 34 34 A A H < S+ 0 0 58 -4,-2.3 4,-0.3 1,-0.2 -2,-0.2 0.809 113.2 48.3 -53.8 -30.8 6.0 1.2 -12.0 35 35 A Q H X S+ 0 0 79 -4,-1.6 4,-2.2 2,-0.2 -1,-0.2 0.916 116.2 40.2 -75.6 -46.5 4.0 4.0 -10.4 36 36 A L H X>S+ 0 0 0 -4,-1.9 4,-1.7 2,-0.2 5,-1.4 0.942 111.2 56.2 -66.9 -49.5 6.7 5.3 -8.2 37 37 A V H <5S+ 0 0 62 -4,-4.6 -1,-0.2 1,-0.3 -2,-0.2 0.713 113.3 45.5 -55.0 -19.7 9.4 4.9 -10.9 38 38 A S H 45S+ 0 0 104 -5,-0.4 -1,-0.3 -4,-0.3 -2,-0.2 0.833 101.3 62.5 -90.6 -40.3 7.0 7.1 -12.9 39 39 A M H <5S- 0 0 94 -4,-2.2 -2,-0.2 1,-0.1 -3,-0.1 0.773 131.1 -88.0 -55.7 -27.5 6.4 9.6 -10.2 40 40 A G T <5S+ 0 0 67 -4,-1.7 2,-0.2 1,-0.2 -3,-0.2 0.657 86.7 125.3 119.8 39.2 10.1 10.4 -10.4 41 41 A F < - 0 0 41 -5,-1.4 2,-0.6 -8,-0.2 -1,-0.2 -0.618 65.8 -89.5-117.4 177.3 11.7 7.9 -8.0 42 42 A S >> - 0 0 52 -2,-0.2 4,-4.0 1,-0.2 3,-0.5 -0.816 26.7-141.1 -94.1 118.8 14.4 5.3 -8.1 43 43 A Q H 3> S+ 0 0 115 -2,-0.6 4,-3.3 1,-0.3 5,-0.2 0.893 103.5 56.5 -38.6 -58.5 13.1 1.8 -9.0 44 44 A L H 3> S+ 0 0 53 1,-0.2 4,-2.3 2,-0.2 -1,-0.3 0.901 116.6 35.8 -40.3 -56.2 15.4 0.2 -6.5 45 45 A H H <> S+ 0 0 24 -3,-0.5 4,-3.3 2,-0.2 5,-0.3 0.946 111.2 59.9 -64.5 -50.5 13.9 2.4 -3.8 46 46 A C H X S+ 0 0 0 -4,-4.0 4,-1.7 1,-0.2 -1,-0.2 0.836 110.1 47.0 -45.6 -35.7 10.4 2.2 -5.4 47 47 A Q H X S+ 0 0 46 -4,-3.3 4,-3.2 -5,-0.3 -2,-0.2 0.979 113.8 43.1 -70.7 -59.8 10.9 -1.5 -4.8 48 48 A K H X S+ 0 0 26 -4,-2.3 4,-5.1 2,-0.2 5,-0.4 0.950 113.0 54.3 -49.9 -58.4 12.2 -1.4 -1.2 49 49 A A H X S+ 0 0 0 -4,-3.3 4,-1.8 2,-0.2 6,-0.3 0.920 113.2 40.6 -39.3 -70.7 9.6 1.2 -0.3 50 50 A A H ><>S+ 0 0 0 -4,-1.7 5,-4.2 -5,-0.3 3,-1.3 0.930 118.3 48.0 -44.1 -59.8 6.7 -1.0 -1.5 51 51 A I H ><5S+ 0 0 36 -4,-3.2 3,-4.0 3,-0.3 -1,-0.2 0.929 107.2 55.3 -46.9 -55.1 8.3 -4.1 -0.1 52 52 A N H 3<5S+ 0 0 89 -4,-5.1 -1,-0.3 1,-0.3 -2,-0.2 0.807 117.9 37.2 -48.8 -31.4 8.9 -2.3 3.2 53 53 A T T X<5S- 0 0 15 -4,-1.8 3,-3.7 -3,-1.3 -1,-0.3 -0.014 115.6-115.7-110.2 26.1 5.2 -1.7 3.0 54 54 A S T < 5 - 0 0 76 -3,-4.0 -3,-0.3 1,-0.3 -2,-0.1 0.771 66.0 -73.5 44.2 28.6 4.4 -5.1 1.6 55 55 A N T 3 - 0 0 20 -4,-0.2 4,-3.1 -7,-0.1 3,-0.3 -0.911 57.6-104.7-176.6 150.3 -0.3 0.9 -1.6 58 58 A V H > S+ 0 0 30 1,-0.3 4,-2.8 -2,-0.3 5,-0.2 0.869 124.4 52.5 -47.5 -41.6 1.6 3.3 -3.8 59 59 A E H > S+ 0 0 149 2,-0.2 4,-3.4 1,-0.2 -1,-0.3 0.914 109.9 47.3 -61.6 -45.2 1.1 5.9 -1.0 60 60 A E H > S+ 0 0 86 -3,-0.3 4,-2.3 2,-0.2 -2,-0.2 0.941 112.2 49.4 -61.3 -50.3 2.5 3.5 1.5 61 61 A A H X S+ 0 0 0 -4,-3.1 4,-2.0 2,-0.2 3,-0.3 0.957 116.3 42.0 -52.9 -57.4 5.5 2.7 -0.6 62 62 A M H X S+ 0 0 47 -4,-2.8 4,-3.2 1,-0.2 5,-0.4 0.939 108.4 59.2 -55.3 -52.8 6.2 6.3 -1.3 63 63 A N H < S+ 0 0 97 -4,-3.4 4,-0.4 1,-0.3 -1,-0.2 0.874 107.1 48.7 -43.2 -45.5 5.6 7.3 2.3 64 64 A W H >X S+ 0 0 30 -4,-2.3 3,-1.5 -3,-0.3 4,-0.7 0.923 109.7 51.6 -61.8 -45.5 8.4 4.9 3.2 65 65 A L H >X S+ 0 0 0 -4,-2.0 3,-1.0 1,-0.3 4,-0.7 0.905 105.2 54.8 -56.9 -44.1 10.5 6.5 0.5 66 66 A L H 3< S+ 0 0 95 -4,-3.2 -1,-0.3 1,-0.3 -2,-0.2 0.624 117.7 38.0 -64.7 -12.0 9.8 9.9 2.0 67 67 A S H <4 S+ 0 0 92 -3,-1.5 -1,-0.3 -4,-0.4 -2,-0.3 0.374 125.2 38.3-116.1 -3.3 11.1 8.3 5.2 68 68 A H H X< S+ 0 0 43 -3,-1.0 3,-0.6 -4,-0.7 -2,-0.2 0.030 85.9 99.6-134.2 22.6 13.8 6.3 3.5 69 69 A M T 3< S+ 0 0 85 -4,-0.7 2,-0.5 1,-0.2 -3,-0.1 0.871 88.1 41.2 -77.5 -40.1 14.9 8.9 1.0 70 70 A D T 3 S+ 0 0 157 -5,-0.1 -1,-0.2 -4,-0.1 3,-0.0 -0.494 96.0 112.1-106.8 59.5 17.9 10.1 3.0 71 71 A D < - 0 0 55 -3,-0.6 4,-0.2 -2,-0.5 -3,-0.1 -0.924 68.3-133.3-131.2 155.6 19.1 6.7 4.2 72 72 A P S >> S+ 0 0 90 0, 0.0 4,-1.3 0, 0.0 3,-1.2 0.807 108.0 57.8 -75.0 -31.7 22.1 4.5 3.5 73 73 A D T 34 S+ 0 0 80 1,-0.3 -5,-0.0 2,-0.2 -3,-0.0 0.883 89.3 72.1 -64.6 -39.6 20.0 1.4 3.0 74 74 A I T 34 S+ 0 0 4 1,-0.3 -1,-0.3 -6,-0.1 -26,-0.1 0.760 106.3 40.5 -46.5 -25.7 18.1 3.2 0.2 75 75 A D T <4 S+ 0 0 115 -3,-1.2 -1,-0.3 -4,-0.2 -2,-0.2 0.802 96.2 98.0 -91.6 -36.6 21.4 2.7 -1.6 76 76 A A S < S- 0 0 40 -4,-1.3 2,-0.1 1,-0.1 3,-0.0 -0.152 84.6-103.2 -52.5 147.2 21.9 -0.9 -0.3 77 77 A P - 0 0 85 0, 0.0 3,-0.3 0, 0.0 -1,-0.1 -0.396 15.7-133.6 -75.0 152.4 20.8 -3.6 -2.7 78 78 A I S S+ 0 0 70 1,-0.3 2,-0.5 -2,-0.1 -2,-0.1 0.952 99.0 22.2 -68.8 -51.7 17.6 -5.5 -2.2 79 79 A S S S+ 0 0 114 2,-0.0 -1,-0.3 3,-0.0 0, 0.0 -0.895 94.8 109.9-123.4 100.0 19.2 -8.9 -2.7 80 80 A G S S- 0 0 45 -2,-0.5 2,-2.3 -3,-0.3 -4,-0.0 -0.610 79.0 -35.0-143.5-157.6 22.9 -9.0 -2.2 81 81 A P - 0 0 125 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.484 68.5-149.5 -75.0 75.8 25.6 -10.3 0.1 82 82 A S + 0 0 119 -2,-2.3 2,-0.2 2,-0.0 -3,-0.0 -0.047 27.7 161.8 -44.8 146.8 23.6 -10.0 3.3 83 83 A S 0 0 129 1,-0.0 -1,-0.0 0, 0.0 0, 0.0 -0.713 360.0 360.0-175.6 119.7 25.7 -9.3 6.3 84 84 A G 0 0 110 -2,-0.2 -2,-0.0 0, 0.0 -1,-0.0 -0.388 360.0 360.0-169.0 360.0 24.9 -7.8 9.7