==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 13-APR-04 1VFI . COMPND 2 MOLECULE: VANADIUM-BINDING PROTEIN 2; . SOURCE 2 ORGANISM_SCIENTIFIC: ASCIDIA SYDNEIENSIS SAMEA; . AUTHOR T.HAMADA,H.HIROTA,M.ASANUMA,F.HAYASHI,N.KOBAYASHI,T.UEKI, . 95 1 9 9 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7624.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 62.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 9.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 46 48.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A I 0 0 227 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 131.4 -16.7 16.3 3.9 2 2 A S - 0 0 86 2,-0.1 2,-1.6 0, 0.0 0, 0.0 -0.791 360.0 -84.3-124.9 167.7 -14.9 19.3 2.5 3 3 A E S S+ 0 0 177 -2,-0.3 2,-0.3 0, 0.0 0, 0.0 -0.572 89.7 91.0 -75.2 89.5 -11.5 20.0 1.0 4 4 A F + 0 0 173 -2,-1.6 -2,-0.1 2,-0.1 67,-0.0 -0.970 49.0 47.7-167.6 173.1 -9.4 20.4 4.2 5 5 A A S S- 0 0 76 -2,-0.3 2,-0.1 2,-0.0 -1,-0.1 0.194 90.7 -54.8 67.1 165.2 -7.3 18.6 6.8 6 6 A P - 0 0 71 0, 0.0 2,-0.3 0, 0.0 88,-0.1 -0.379 53.8-130.2 -75.0 154.1 -4.5 16.2 6.0 7 7 A V - 0 0 64 86,-0.3 88,-0.3 -2,-0.1 2,-0.2 -0.712 15.4-145.2-104.5 156.3 -5.1 13.2 3.8 8 8 A D - 0 0 102 -2,-0.3 -1,-0.0 87,-0.1 87,-0.0 -0.422 16.5-175.8-108.4-175.1 -4.1 9.6 4.6 9 9 A a S S+ 0 0 24 -2,-0.2 -1,-0.1 4,-0.0 54,-0.1 0.373 76.3 65.6-147.1 -50.7 -2.9 6.7 2.4 10 10 A K S S+ 0 0 175 1,-0.3 3,-0.3 2,-0.1 50,-0.1 0.931 113.2 37.6 -45.7 -57.4 -2.6 3.6 4.6 11 11 A G S S+ 0 0 54 1,-0.3 2,-2.1 2,-0.0 -1,-0.3 0.859 107.8 68.2 -63.8 -37.4 -6.4 3.6 5.2 12 12 A Q S S+ 0 0 140 1,-0.2 -1,-0.3 2,-0.1 51,-0.1 -0.380 83.8 78.4 -82.0 59.1 -6.9 4.7 1.6 13 13 A b + 0 0 8 -2,-2.1 -1,-0.2 -3,-0.3 47,-0.1 -0.186 51.1 109.3-160.4 50.4 -5.7 1.4 0.3 14 14 A T S S+ 0 0 96 -3,-0.2 7,-0.2 2,-0.1 6,-0.1 0.792 79.3 49.6 -97.6 -38.7 -8.6 -1.1 0.7 15 15 A T S > S+ 0 0 113 1,-0.2 3,-1.1 2,-0.2 41,-0.1 0.931 117.9 39.7 -65.7 -48.0 -9.5 -1.5 -2.9 16 16 A P T 3 S+ 0 0 25 0, 0.0 -1,-0.2 0, 0.0 4,-0.2 0.656 125.3 40.3 -75.0 -16.8 -6.0 -2.2 -4.0 17 17 A c T 3> S+ 0 0 7 38,-0.1 4,-1.6 39,-0.1 -2,-0.2 -0.059 87.9 101.6-119.0 27.7 -5.5 -4.2 -0.9 18 18 A E H <> S+ 0 0 122 -3,-1.1 4,-1.5 2,-0.2 -3,-0.1 0.939 90.5 32.8 -75.7 -51.0 -8.9 -5.8 -1.1 19 19 A P H > S+ 0 0 56 0, 0.0 4,-1.2 0, 0.0 -1,-0.1 0.800 120.0 54.8 -75.0 -30.9 -7.7 -9.2 -2.5 20 20 A L H >> S+ 0 0 7 32,-0.3 4,-2.5 2,-0.2 3,-1.1 0.990 108.5 44.7 -64.5 -63.0 -4.4 -8.9 -0.6 21 21 A T H 3X S+ 0 0 74 -4,-1.6 4,-3.8 1,-0.3 -1,-0.2 0.896 112.2 53.6 -47.0 -48.3 -5.9 -8.5 2.8 22 22 A A H 3X S+ 0 0 53 -4,-1.5 4,-2.7 1,-0.2 -1,-0.3 0.833 108.6 51.6 -56.7 -33.4 -8.4 -11.2 2.1 23 23 A d H < S+ 0 0 104 -4,-2.6 3,-1.1 1,-0.2 -1,-0.3 0.965 113.1 44.9 -64.2 -55.1 -7.2 -18.5 9.5 30 30 A S H 3< S+ 0 0 102 -4,-2.1 -2,-0.2 1,-0.3 -1,-0.2 0.751 115.1 52.7 -60.5 -24.1 -5.5 -21.4 7.9 31 31 A f T >< S+ 0 0 7 -4,-3.4 3,-0.7 -5,-0.1 2,-0.5 -0.386 80.5 157.8-108.1 50.8 -2.4 -20.3 9.9 32 32 A E T < S- 0 0 106 -3,-1.1 3,-0.1 1,-0.3 -3,-0.1 -0.668 78.2 -22.4 -81.4 124.3 -4.3 -20.3 13.2 33 33 A T T 3 S+ 0 0 128 -2,-0.5 -1,-0.3 1,-0.2 2,-0.1 0.784 101.1 162.3 45.5 30.4 -1.9 -20.6 16.2 34 34 A S X - 0 0 50 -3,-0.7 3,-0.7 1,-0.1 2,-0.3 -0.468 54.2 -80.6 -79.9 152.1 0.4 -22.2 13.7 35 35 A A T 3 S- 0 0 83 1,-0.3 5,-0.3 -2,-0.1 -1,-0.1 -0.347 117.5 -2.9 -55.0 111.6 4.1 -22.5 14.4 36 36 A D T 3> S- 0 0 114 -2,-0.3 4,-3.0 3,-0.1 -1,-0.3 0.996 76.4-161.9 65.1 66.1 5.4 -19.1 13.6 37 37 A K H <> S+ 0 0 69 -3,-0.7 4,-3.5 1,-0.2 5,-0.3 0.909 88.3 54.1 -41.2 -57.6 2.2 -17.5 12.4 38 38 A K H > S+ 0 0 126 1,-0.2 4,-4.4 2,-0.2 5,-0.2 0.932 111.1 43.4 -41.5 -68.9 4.2 -14.8 10.7 39 39 A T H > S+ 0 0 79 2,-0.2 4,-3.1 1,-0.2 5,-0.3 0.912 114.9 50.7 -43.3 -56.7 6.3 -17.2 8.7 40 40 A f H X S+ 0 0 36 -4,-3.0 4,-2.5 -5,-0.3 3,-0.3 0.954 115.8 40.6 -46.2 -65.0 3.3 -19.3 7.9 41 41 A R H X S+ 0 0 69 -4,-3.5 4,-2.1 1,-0.2 -1,-0.2 0.915 111.6 58.1 -50.0 -49.9 1.4 -16.3 6.7 42 42 A R H < S+ 0 0 114 -4,-4.4 4,-0.4 -5,-0.3 3,-0.3 0.901 109.9 43.3 -46.7 -49.7 4.5 -15.0 5.0 43 43 A N H >X S+ 0 0 115 -4,-3.1 3,-1.5 -3,-0.3 4,-1.3 0.876 111.5 53.9 -64.7 -38.9 4.6 -18.2 3.0 44 44 A e H 3X S+ 0 0 32 -4,-2.5 4,-1.0 -5,-0.3 -1,-0.3 0.740 100.0 63.3 -66.5 -22.7 0.9 -18.0 2.4 45 45 A K H 3X S+ 0 0 46 -4,-2.1 4,-0.7 -3,-0.3 -1,-0.3 0.678 105.6 44.8 -73.8 -18.3 1.7 -14.5 1.1 46 46 A K H <4 S+ 0 0 132 -3,-1.5 4,-0.3 -4,-0.4 -2,-0.2 0.682 95.2 78.4 -95.2 -24.6 3.7 -16.2 -1.6 47 47 A A H < S- 0 0 74 -4,-1.3 -2,-0.2 1,-0.2 -3,-0.1 0.945 133.3 -36.0 -46.8 -60.9 1.0 -18.9 -2.3 48 48 A D H < S+ 0 0 113 -4,-1.0 -1,-0.2 2,-0.0 -2,-0.2 -0.077 121.2 91.2-161.3 41.9 -1.0 -16.4 -4.3 49 49 A d X + 0 0 0 -4,-0.7 4,-1.1 2,-0.1 -3,-0.1 -0.016 57.3 97.1-128.9 24.7 -0.6 -13.1 -2.6 50 50 A E H > S+ 0 0 95 -4,-0.3 4,-1.4 2,-0.2 -4,-0.1 0.926 93.2 32.2 -79.0 -49.7 2.4 -11.9 -4.7 51 51 A P H > S+ 0 0 68 0, 0.0 4,-2.7 0, 0.0 5,-0.2 0.862 118.9 54.6 -75.0 -38.5 0.4 -9.8 -7.2 52 52 A Q H > S+ 0 0 42 1,-0.2 4,-1.2 2,-0.2 -32,-0.3 0.920 109.1 47.5 -60.2 -46.6 -2.3 -8.8 -4.7 53 53 A D H X S+ 0 0 51 -4,-1.1 4,-2.0 -8,-0.2 3,-0.4 0.895 109.9 54.5 -61.5 -41.6 0.3 -7.5 -2.3 54 54 A K H X S+ 0 0 133 -4,-1.4 4,-2.7 1,-0.3 -2,-0.2 0.954 101.4 56.3 -56.3 -54.2 2.0 -5.6 -5.1 55 55 A V H X S+ 0 0 73 -4,-2.7 4,-1.8 1,-0.2 -1,-0.3 0.825 106.2 55.2 -46.7 -34.8 -1.3 -3.9 -6.0 56 56 A c H >X S+ 0 0 6 -4,-1.2 4,-2.1 -3,-0.4 3,-0.7 0.993 106.0 46.8 -62.3 -64.2 -1.2 -2.7 -2.4 57 57 A D H 3X S+ 0 0 103 -4,-2.0 4,-3.3 1,-0.3 5,-0.2 0.904 107.3 59.3 -42.3 -53.9 2.2 -1.2 -2.6 58 58 A A H 3X S+ 0 0 40 -4,-2.7 4,-4.3 1,-0.2 -1,-0.3 0.896 105.8 48.6 -41.7 -52.4 1.2 0.5 -5.9 59 59 A b H X S+ 0 0 119 -4,-4.3 4,-4.0 -5,-0.2 3,-1.0 0.973 113.9 53.5 -67.2 -56.8 0.4 6.2 -6.0 63 63 A a H 3X S+ 0 0 19 -4,-3.6 4,-4.6 1,-0.3 5,-0.3 0.895 103.1 60.5 -43.2 -48.8 -1.3 7.7 -3.0 64 64 A H H 3X S+ 0 0 117 -4,-1.2 4,-1.9 -5,-0.4 -1,-0.3 0.903 116.6 31.0 -45.4 -50.3 2.2 9.0 -2.0 65 65 A K H - 0 0 27 1,-0.1 4,-2.8 2,-0.1 5,-0.2 -0.421 14.2-142.9 -68.7 140.1 12.8 19.0 -2.6 84 84 A D H > S+ 0 0 137 2,-0.2 4,-2.5 1,-0.2 5,-0.3 0.964 103.5 51.6 -66.7 -54.3 13.2 20.0 1.0 85 85 A T H > S+ 0 0 64 1,-0.2 4,-1.0 2,-0.2 -1,-0.2 0.715 113.6 50.3 -55.2 -20.7 10.2 22.3 1.0 86 86 A i H >> S+ 0 0 6 2,-0.2 4,-3.4 3,-0.2 3,-0.6 0.961 108.5 45.6 -80.7 -62.4 8.4 19.3 -0.5 87 87 A R H 3X S+ 0 0 175 -4,-2.8 4,-1.0 1,-0.3 -2,-0.2 0.768 116.6 50.6 -51.5 -26.8 9.4 16.7 2.1 88 88 A A H 3X S+ 0 0 53 -4,-2.5 4,-1.6 -5,-0.2 -1,-0.3 0.841 112.7 44.5 -79.6 -36.6 8.5 19.4 4.6 89 89 A h H