==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GROWTH FACTOR 17-DEC-97 1VGH . COMPND 2 MOLECULE: VASCULAR ENDOTHELIAL GROWTH FACTOR-165; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR W.J.FAIRBROTHER,M.A.CHAMPE,H.W.CHRISTINGER,B.A.KEYT, . 55 1 4 4 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5121.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 27 49.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 14.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 12.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 5.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 12.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 131 0, 0.0 2,-0.3 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 127.0 -6.0 -23.7 -6.7 2 2 A R + 0 0 229 1,-0.0 3,-0.2 0, 0.0 0, 0.0 -0.894 360.0 3.7-164.3 131.5 -7.1 -24.7 -3.2 3 3 A Q S S- 0 0 174 -2,-0.3 2,-1.0 1,-0.2 -1,-0.0 0.929 78.0-161.2 54.7 52.2 -9.3 -23.0 -0.6 4 4 A E + 0 0 134 1,-0.1 -1,-0.2 -3,-0.0 0, 0.0 -0.530 30.5 148.6 -72.8 98.6 -10.1 -20.2 -3.1 5 5 A N - 0 0 129 -2,-1.0 3,-0.1 -3,-0.2 -1,-0.1 -0.772 33.7-151.7-133.7 84.5 -11.3 -17.3 -0.9 6 6 A P - 0 0 122 0, 0.0 17,-0.1 0, 0.0 2,-0.1 -0.203 29.0 -97.2 -55.4 145.9 -10.4 -13.9 -2.4 7 7 A a - 0 0 26 15,-0.5 13,-0.1 1,-0.1 17,-0.1 -0.367 30.7-129.9 -66.8 144.8 -9.9 -10.9 -0.1 8 8 A G - 0 0 57 -3,-0.1 4,-0.1 -2,-0.1 5,-0.1 -0.893 33.6-103.0 -98.8 118.4 -12.8 -8.5 0.5 9 9 A P - 0 0 75 0, 0.0 3,-0.4 0, 0.0 -1,-0.1 -0.059 27.6-133.4 -43.2 135.2 -11.8 -4.8 0.1 10 10 A b S S+ 0 0 69 1,-0.3 2,-1.8 15,-0.1 3,-0.0 0.959 96.3 49.1 -63.1 -61.8 -11.5 -3.1 3.5 11 11 A S S > S- 0 0 41 4,-0.2 4,-1.1 2,-0.1 2,-0.7 -0.499 120.5 -94.7 -84.9 68.9 -13.4 0.2 2.9 12 12 A E T 4 - 0 0 125 -2,-1.8 -1,-0.1 -3,-0.4 0, 0.0 -0.446 63.7 -73.2 61.2-102.9 -16.6 -1.5 1.4 13 13 A R T 4 S+ 0 0 204 -2,-0.7 -1,-0.2 -5,-0.1 -2,-0.1 0.315 118.6 79.6-150.2 -47.0 -16.0 -1.3 -2.4 14 14 A R T 4 S+ 0 0 159 1,-0.2 2,-2.2 2,-0.1 3,-0.2 0.679 73.0 87.7 -48.0 -29.0 -16.5 2.4 -3.4 15 15 A K >< + 0 0 62 -4,-1.1 3,-1.1 1,-0.2 -1,-0.2 -0.489 47.8 155.6 -71.6 70.7 -12.9 3.2 -2.1 16 16 A H T 3 + 0 0 137 -2,-2.2 -1,-0.2 1,-0.2 -2,-0.1 0.669 63.4 72.7 -71.6 -19.2 -11.4 2.3 -5.5 17 17 A L T 3 S+ 0 0 63 30,-0.3 13,-2.4 -3,-0.2 14,-0.5 0.630 87.5 80.1 -70.9 -15.8 -8.4 4.6 -4.5 18 18 A F E < -A 29 0A 42 -3,-1.1 2,-0.3 11,-0.2 11,-0.2 -0.714 66.5-159.9 -89.9 144.8 -7.4 1.8 -2.1 19 19 A V E -A 28 0A 74 9,-2.8 9,-2.4 -2,-0.3 2,-0.4 -0.853 10.1-146.3-118.1 157.3 -5.5 -1.4 -3.2 20 20 A Q E -A 27 0A 50 -2,-0.3 7,-0.2 7,-0.2 -13,-0.1 -0.974 19.0-111.8-134.3 139.3 -5.5 -4.6 -1.2 21 21 A D > - 0 0 61 5,-2.4 4,-1.5 -2,-0.4 -14,-0.1 -0.538 28.4-138.7 -68.1 129.3 -2.9 -7.4 -0.6 22 22 A P T 4 S+ 0 0 113 0, 0.0 -15,-0.5 0, 0.0 -1,-0.1 0.740 94.0 30.4 -68.9 -27.1 -4.2 -10.6 -2.3 23 23 A Q T 4 S+ 0 0 166 -17,-0.1 -2,-0.0 3,-0.1 -3,-0.0 0.862 130.4 29.2 -98.0 -48.0 -3.3 -13.0 0.5 24 24 A T T 4 S- 0 0 65 2,-0.1 -3,-0.0 -17,-0.1 -1,-0.0 0.516 91.8-134.3 -99.6 -8.6 -3.4 -11.1 3.8 25 25 A a < + 0 0 50 -4,-1.5 2,-0.4 1,-0.2 -15,-0.1 0.642 48.3 153.8 67.2 18.9 -6.2 -8.6 2.8 26 26 A K - 0 0 141 -17,-0.1 -5,-2.4 -6,-0.0 2,-0.3 -0.682 33.4-142.8 -81.6 130.3 -4.3 -5.6 4.2 27 27 A b E +A 20 0A 35 -2,-0.4 2,-0.3 -7,-0.2 -7,-0.2 -0.728 22.1 176.0-102.6 144.3 -5.2 -2.3 2.4 28 28 A S E -A 19 0A 83 -9,-2.4 -9,-2.8 -2,-0.3 2,-0.2 -0.986 30.3-113.8-140.6 145.7 -3.1 0.7 1.5 29 29 A c E -A 18 0A 33 -2,-0.3 -11,-0.2 -11,-0.2 19,-0.1 -0.578 5.6-148.7 -79.6 140.9 -4.0 3.8 -0.5 30 30 A K S S+ 0 0 129 -13,-2.4 -1,-0.1 -2,-0.2 -12,-0.1 0.911 88.1 67.8 -66.7 -47.0 -2.5 4.6 -3.9 31 31 A N S S- 0 0 15 -14,-0.5 2,-0.3 17,-0.2 -2,-0.1 -0.432 75.0-168.0 -74.4 150.7 -2.8 8.3 -3.1 32 32 A T > - 0 0 48 -2,-0.1 4,-2.4 1,-0.1 5,-0.1 -0.910 39.5-113.0-140.0 160.9 -0.6 9.7 -0.3 33 33 A D H > S+ 0 0 63 -2,-0.3 4,-2.7 2,-0.2 8,-0.2 0.803 119.7 57.6 -62.1 -31.9 0.0 12.7 2.0 34 34 A S H > S+ 0 0 80 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.933 107.5 45.6 -64.4 -48.0 3.3 13.1 0.0 35 35 A R H > S+ 0 0 116 2,-0.2 4,-0.8 1,-0.2 -2,-0.2 0.946 116.1 46.0 -56.5 -52.0 1.4 13.4 -3.3 36 36 A d H ><>S+ 0 0 0 -4,-2.4 5,-2.1 1,-0.2 3,-1.0 0.901 110.2 53.3 -60.7 -43.3 -1.2 15.8 -1.7 37 37 A K H ><5S+ 0 0 135 -4,-2.7 3,-1.7 1,-0.3 -1,-0.2 0.869 103.6 56.5 -61.2 -39.0 1.6 17.9 -0.1 38 38 A A H 3<5S+ 0 0 74 -4,-2.1 -1,-0.3 1,-0.3 -2,-0.2 0.746 110.6 45.4 -61.0 -24.5 3.3 18.3 -3.5 39 39 A R T <<5S- 0 0 137 -3,-1.0 -1,-0.3 -4,-0.8 -2,-0.2 0.232 124.6-107.9 -99.3 8.3 -0.1 19.7 -4.6 40 40 A Q T < 5S+ 0 0 138 -3,-1.7 -3,-0.3 1,-0.3 2,-0.2 0.904 89.7 98.0 60.7 47.3 -0.2 21.9 -1.4 41 41 A L < - 0 0 43 -5,-2.1 2,-0.3 -8,-0.2 -1,-0.3 -0.772 65.5-127.8-140.2 179.7 -3.0 19.8 0.1 42 42 A E E -B 51 0B 42 9,-2.6 9,-2.8 -2,-0.2 2,-0.3 -0.926 30.8 -94.9-135.1 163.8 -3.2 16.8 2.6 43 43 A L E -B 50 0B 21 -2,-0.3 2,-0.9 7,-0.2 7,-0.2 -0.629 17.5-145.2 -85.0 132.2 -4.8 13.4 2.4 44 44 A N E >>> -B 49 0B 35 5,-2.8 4,-2.9 -2,-0.3 5,-0.8 -0.868 17.5-154.9 -89.2 103.1 -8.3 12.7 3.7 45 45 A E T 345S+ 0 0 150 -2,-0.9 -1,-0.1 1,-0.2 5,-0.0 0.504 83.8 64.6 -65.3 -6.3 -7.6 9.1 4.9 46 46 A R T 345S+ 0 0 189 3,-0.1 -1,-0.2 1,-0.1 -35,-0.0 0.951 124.6 10.4 -79.3 -56.0 -11.3 8.1 4.6 47 47 A T T <45S- 0 0 41 -3,-0.5 -30,-0.3 2,-0.1 -2,-0.2 0.620 97.4-128.0 -93.1 -21.5 -11.6 8.4 0.8 48 48 A c T <5 + 0 0 3 -4,-2.9 2,-0.3 1,-0.3 -17,-0.2 0.903 64.0 133.9 57.9 50.4 -7.8 8.9 0.2 49 49 A R E < -B 44 0B 146 -5,-0.8 -5,-2.8 -18,-0.1 2,-0.5 -0.820 63.8-101.2-114.4 159.4 -8.5 12.1 -1.8 50 50 A d E +B 43 0B 32 -2,-0.3 -7,-0.2 -7,-0.2 2,-0.2 -0.751 47.7 169.8 -89.2 125.1 -6.5 15.3 -1.4 51 51 A D E -B 42 0B 36 -9,-2.8 -9,-2.6 -2,-0.5 3,-0.1 -0.691 45.9 -52.1-124.4 175.4 -8.3 18.0 0.6 52 52 A K S S- 0 0 141 -2,-0.2 2,-0.5 -11,-0.2 -1,-0.2 -0.147 70.3 -94.5 -53.9 142.9 -7.4 21.4 2.1 53 53 A P - 0 0 40 0, 0.0 2,-2.0 0, 0.0 -1,-0.2 -0.493 28.9-151.0 -71.7 113.6 -4.2 21.2 4.3 54 54 A R 0 0 189 -2,-0.5 -13,-0.0 -3,-0.1 -2,-0.0 -0.488 360.0 360.0 -83.2 67.0 -5.3 20.7 7.9 55 55 A R 0 0 228 -2,-2.0 -13,-0.0 -13,-0.0 0, 0.0 -0.968 360.0 360.0-156.2 360.0 -2.2 22.5 9.2