==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER FLAVOPROTEIN 01-JUL-08 2VX9 . COMPND 2 MOLECULE: DODECIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HALOBACTERIUM SALINARUM R1; . AUTHOR M.GRININGER,H.STAUDT,P.JOHANSSON,J.WACHTVEITL,D.OESTERHELT . 63 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4388.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 44 69.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 24 38.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 13 20.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A V 0 0 133 0, 0.0 62,-2.9 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 135.7 22.8 84.8 69.3 2 3 A F E -A 62 0A 106 60,-0.2 2,-0.3 58,-0.0 60,-0.2 -0.837 360.0-161.9-106.0 151.6 21.3 82.0 67.1 3 4 A K E -A 61 0A 116 58,-2.3 58,-2.5 -2,-0.3 2,-0.4 -0.958 7.5-148.1-126.3 147.6 18.8 82.6 64.3 4 5 A K E -A 60 0A 92 -2,-0.3 2,-0.4 56,-0.2 56,-0.2 -0.957 4.3-159.6-118.2 142.0 16.5 80.0 62.6 5 6 A V E -A 59 0A 43 54,-2.1 54,-2.9 -2,-0.4 2,-0.9 -0.932 20.5-131.8-114.0 141.4 15.2 79.7 59.1 6 7 A L E +A 58 0A 95 -2,-0.4 2,-0.4 52,-0.2 52,-0.2 -0.811 37.3 170.0-100.6 103.7 12.2 77.6 58.4 7 8 A L E -A 57 0A 49 50,-2.6 50,-3.0 -2,-0.9 2,-0.6 -0.915 28.9-149.1-120.7 143.4 12.9 75.4 55.3 8 9 A T E -A 56 0A 70 -2,-0.4 48,-0.3 48,-0.3 2,-0.2 -0.934 18.6-162.4-110.3 111.2 11.2 72.4 53.7 9 10 A G E -A 55 0A 0 46,-2.5 46,-1.9 -2,-0.6 2,-0.3 -0.569 5.7-152.1 -83.3 155.6 13.6 69.9 52.0 10 11 A T E +A 54 0A 64 44,-0.2 2,-0.3 -2,-0.2 44,-0.2 -0.949 17.0 168.9-130.7 153.9 12.4 67.4 49.4 11 12 A S E -A 53 0A 17 42,-2.1 42,-2.6 -2,-0.3 7,-0.1 -0.970 34.9-145.6-158.2 140.8 13.6 63.9 48.3 12 13 A E S S+ 0 0 81 -2,-0.3 3,-0.1 40,-0.2 39,-0.1 0.441 100.9 48.4 -82.7 4.2 12.3 61.1 46.2 13 14 A E S S- 0 0 142 1,-0.3 2,-0.3 40,-0.1 -1,-0.1 0.834 112.5 -26.4-110.7 -51.2 14.1 58.7 48.6 14 15 A S > - 0 0 47 39,-0.1 4,-1.9 1,-0.1 -1,-0.3 -0.996 49.3-104.4-161.1 166.1 13.4 59.3 52.3 15 16 A F H > S+ 0 0 78 -2,-0.3 4,-2.0 2,-0.2 5,-0.1 0.852 120.3 54.4 -65.0 -35.2 12.5 61.7 55.1 16 17 A T H > S+ 0 0 103 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.945 108.8 47.5 -62.9 -45.4 16.2 61.7 56.2 17 18 A A H > S+ 0 0 29 1,-0.2 4,-1.9 2,-0.2 -2,-0.2 0.863 108.7 54.8 -67.4 -31.5 17.3 62.7 52.7 18 19 A A H X S+ 0 0 0 -4,-1.9 4,-1.6 2,-0.2 -1,-0.2 0.916 107.2 50.7 -66.8 -38.9 14.6 65.5 52.6 19 20 A A H X S+ 0 0 18 -4,-2.0 4,-2.2 1,-0.2 -2,-0.2 0.935 109.9 50.6 -60.3 -42.2 16.1 66.9 55.8 20 21 A D H X S+ 0 0 85 -4,-2.2 4,-2.9 1,-0.2 -1,-0.2 0.861 103.6 59.1 -64.1 -36.2 19.5 66.8 54.3 21 22 A D H X S+ 0 0 70 -4,-1.9 4,-1.6 1,-0.2 -1,-0.2 0.908 109.2 43.7 -60.1 -44.0 18.2 68.7 51.2 22 23 A A H X S+ 0 0 3 -4,-1.6 4,-2.1 2,-0.2 -2,-0.2 0.922 114.7 48.3 -64.7 -43.9 17.0 71.6 53.4 23 24 A I H X S+ 0 0 41 -4,-2.2 4,-2.7 1,-0.2 -2,-0.2 0.904 108.1 55.2 -67.8 -41.7 20.3 71.7 55.4 24 25 A D H X S+ 0 0 87 -4,-2.9 4,-1.3 1,-0.2 -1,-0.2 0.904 108.6 48.7 -54.5 -45.2 22.4 71.6 52.2 25 26 A R H X S+ 0 0 139 -4,-1.6 4,-0.8 -5,-0.2 3,-0.2 0.909 110.1 50.9 -65.7 -40.8 20.6 74.7 51.0 26 27 A A H >X S+ 0 0 1 -4,-2.1 4,-1.9 1,-0.2 3,-1.1 0.934 109.7 50.3 -58.8 -45.7 21.1 76.5 54.3 27 28 A E H 3< S+ 0 0 114 -4,-2.7 -1,-0.2 1,-0.3 -2,-0.2 0.741 104.5 59.3 -68.1 -22.8 24.8 75.7 54.2 28 29 A D H 3< S+ 0 0 127 -4,-1.3 -1,-0.3 -3,-0.2 -2,-0.2 0.757 121.4 24.1 -68.0 -28.4 25.0 77.0 50.5 29 30 A T H << S+ 0 0 80 -3,-1.1 2,-0.4 -4,-0.8 -2,-0.2 0.492 116.8 57.4-122.8 -10.2 23.8 80.4 51.7 30 31 A L < - 0 0 47 -4,-1.9 3,-0.4 -5,-0.1 2,-0.3 -0.957 63.2-136.8-133.4 144.8 24.7 80.8 55.4 31 32 A D S S+ 0 0 129 -2,-0.4 31,-0.1 1,-0.2 -3,-0.0 -0.689 81.6 21.6 -92.9 154.4 27.7 80.6 57.6 32 33 A N - 0 0 102 -2,-0.3 30,-2.5 1,-0.2 2,-0.3 0.844 68.4-178.6 63.2 41.9 27.9 78.9 60.9 33 34 A V E +B 61 0A 33 -3,-0.4 28,-0.3 28,-0.3 -1,-0.2 -0.585 5.7 171.8 -67.3 126.1 25.0 76.4 60.5 34 35 A V E - 0 0 71 26,-2.7 2,-0.3 1,-0.4 27,-0.2 0.757 48.6 -14.9-114.4 -33.4 24.9 74.6 63.9 35 36 A W E -B 60 0A 99 25,-1.3 25,-2.8 2,-0.0 -1,-0.4 -0.983 47.3-140.1-162.8 168.5 21.8 72.3 64.1 36 37 A A E -B 59 0A 37 -2,-0.3 2,-0.5 23,-0.2 23,-0.2 -0.994 8.3-155.3-136.3 142.6 18.3 71.5 62.7 37 38 A E E -B 58 0A 83 21,-2.2 21,-2.2 -2,-0.3 2,-0.4 -0.981 21.2-129.0-115.0 127.2 15.0 70.6 64.4 38 39 A V E +B 57 0A 85 -2,-0.5 19,-0.3 19,-0.2 3,-0.1 -0.614 32.9 167.4 -74.4 129.6 12.4 68.6 62.5 39 40 A V E + 0 0 72 17,-2.8 2,-0.3 -2,-0.4 18,-0.2 0.530 60.9 2.5-118.5 -12.1 9.0 70.3 62.8 40 41 A D E -B 56 0A 101 16,-1.3 16,-2.8 2,-0.0 -1,-0.4 -0.953 52.6-163.6-166.6 155.1 6.9 68.5 60.1 41 42 A Q E +B 55 0A 101 -2,-0.3 2,-0.3 14,-0.2 14,-0.2 -0.993 20.6 151.4-141.6 148.3 7.0 65.7 57.6 42 43 A G E -B 54 0A 30 12,-2.3 12,-3.1 -2,-0.3 2,-0.4 -0.927 33.8-118.4-162.8-179.3 4.7 64.9 54.6 43 44 A V E -B 53 0A 63 -2,-0.3 2,-0.4 10,-0.2 10,-0.2 -0.992 13.5-145.2-139.1 124.1 4.5 63.3 51.2 44 45 A A E +B 52 0A 24 8,-3.0 8,-2.4 -2,-0.4 -2,-0.0 -0.745 35.5 148.1 -85.2 133.4 3.6 64.9 47.8 45 46 A I > + 0 0 112 -2,-0.4 3,-0.8 6,-0.2 -1,-0.2 0.575 59.1 53.1-132.0 -54.1 1.7 62.5 45.5 46 47 A G T 3 S+ 0 0 83 1,-0.2 -2,-0.1 3,-0.0 5,-0.0 0.855 114.1 35.9 -63.3 -44.5 -0.8 64.4 43.3 47 48 A A T 3 S+ 0 0 105 3,-0.0 2,-0.3 2,-0.0 -1,-0.2 0.360 106.9 73.7 -95.9 4.0 1.4 67.0 41.6 48 49 A V S < S- 0 0 53 -3,-0.8 3,-0.1 1,-0.1 4,-0.0 -0.872 70.7-137.2-122.6 149.8 4.6 64.9 41.2 49 50 A E S S+ 0 0 195 -2,-0.3 2,-0.4 1,-0.1 -1,-0.1 0.821 97.8 33.0 -73.5 -28.6 5.6 62.1 38.9 50 51 A E S S- 0 0 93 -3,-0.0 -1,-0.1 0, 0.0 -6,-0.1 -0.972 103.6 -93.4-127.1 140.6 7.2 60.2 41.7 51 52 A R - 0 0 158 -2,-0.4 2,-0.5 -39,-0.1 -6,-0.2 -0.293 45.6-154.5 -48.3 132.4 6.1 60.2 45.4 52 53 A T E - B 0 44A 13 -8,-2.4 -8,-3.0 -4,-0.0 -40,-0.2 -0.960 4.7-145.8-126.6 118.9 8.2 63.0 47.1 53 54 A Y E -AB 11 43A 58 -42,-2.6 -42,-2.1 -2,-0.5 2,-0.4 -0.545 16.9-163.4 -78.9 139.6 9.1 62.9 50.8 54 55 A Q E -AB 10 42A 69 -12,-3.1 -12,-2.3 -2,-0.2 2,-0.4 -0.985 10.5-173.6-127.9 140.5 9.2 66.3 52.5 55 56 A T E -AB 9 41A 0 -46,-1.9 -46,-2.5 -2,-0.4 2,-0.4 -0.986 12.1-152.9-133.7 121.0 10.8 67.2 55.8 56 57 A E E +AB 8 40A 47 -16,-2.8 -17,-2.8 -2,-0.4 -16,-1.3 -0.816 20.7 179.2 -96.6 132.0 10.4 70.7 57.3 57 58 A V E -AB 7 38A 2 -50,-3.0 -50,-2.6 -2,-0.4 2,-0.7 -0.977 34.0-133.8-131.8 143.5 13.2 71.9 59.6 58 59 A Q E -AB 6 37A 57 -21,-2.2 -21,-2.2 -2,-0.3 2,-0.6 -0.894 32.3-155.2 -85.6 118.0 14.1 75.0 61.6 59 60 A V E -AB 5 36A 0 -54,-2.9 -54,-2.1 -2,-0.7 2,-0.4 -0.918 6.0-153.0-103.1 118.9 17.8 75.4 60.7 60 61 A A E +AB 4 35A 0 -25,-2.8 -26,-2.7 -2,-0.6 -25,-1.3 -0.753 15.7 178.0 -94.5 136.2 19.8 77.3 63.4 61 62 A F E -AB 3 33A 15 -58,-2.5 -58,-2.3 -2,-0.4 2,-0.4 -0.971 30.7-113.3-135.3 149.8 22.9 79.3 62.6 62 63 A E E A 2 0A 93 -30,-2.5 -60,-0.2 -2,-0.3 -31,-0.1 -0.714 360.0 360.0 -87.4 131.0 25.1 81.4 64.9 63 64 A L 0 0 128 -62,-2.9 -31,-0.0 -2,-0.4 -1,-0.0 -0.476 360.0 360.0 -82.5 360.0 25.1 85.2 64.2