==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SYNTHASE 25-MAY-04 1VZS . COMPND 2 MOLECULE: ATP SYNTHASE COUPLING FACTOR 6, MITOCHONDRIAL . SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; . AUTHOR R.J.CARBAJO,J.A.SILVESTER,M.J.RUNSWICK,J.E.WALKER,D.NEUHAUS . 76 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6733.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 45 59.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 5.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 14 18.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 35.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A N 0 0 158 0, 0.0 4,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 119.9 -16.4 -10.4 4.3 2 2 A K - 0 0 185 2,-0.3 3,-0.1 1,-0.1 0, 0.0 0.997 360.0 -49.1 -68.6 -74.0 -16.8 -8.5 1.1 3 3 A E S S+ 0 0 152 1,-0.2 2,-0.1 0, 0.0 -1,-0.1 0.019 124.4 46.5-158.5 33.7 -13.4 -7.0 0.4 4 4 A L - 0 0 93 4,-0.0 -2,-0.3 2,-0.0 -1,-0.2 -0.483 63.4-157.6 178.3 104.1 -12.3 -5.4 3.7 5 5 A D > - 0 0 72 -2,-0.1 2,-3.1 -4,-0.1 4,-1.1 -0.326 46.0 -84.3 -82.8 168.5 -12.5 -6.8 7.2 6 6 A P T 4 S+ 0 0 120 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.271 126.3 23.1 -71.2 58.5 -12.5 -4.7 10.4 7 7 A V T >> S+ 0 0 80 -2,-3.1 3,-1.3 0, 0.0 4,-0.7 0.048 100.8 77.9 177.2 -45.0 -8.7 -4.6 10.5 8 8 A Q H >> S+ 0 0 76 1,-0.3 4,-1.3 2,-0.2 3,-0.9 0.796 88.5 67.7 -55.1 -28.6 -7.3 -5.1 7.0 9 9 A K H 3X S+ 0 0 121 -4,-1.1 4,-1.4 1,-0.3 -1,-0.3 0.897 90.7 59.7 -59.2 -41.7 -8.3 -1.5 6.3 10 10 A L H <4 S+ 0 0 62 -3,-1.3 -1,-0.3 1,-0.2 -2,-0.2 0.792 100.7 59.5 -57.4 -27.8 -5.6 -0.3 8.7 11 11 A F H XX S+ 0 0 31 -3,-0.9 3,-3.5 -4,-0.7 4,-1.9 0.978 101.4 48.3 -65.8 -57.6 -3.2 -2.0 6.4 12 12 A V H 3X S+ 0 0 46 -4,-1.3 4,-0.5 1,-0.3 -1,-0.2 0.782 111.7 54.2 -54.3 -25.1 -4.0 -0.0 3.3 13 13 A D H 3< S+ 0 0 112 -4,-1.4 -1,-0.3 -5,-0.2 -2,-0.2 0.235 106.8 52.5 -93.2 13.4 -3.6 3.0 5.6 14 14 A K H X> S+ 0 0 76 -3,-3.5 3,-1.3 -5,-0.1 4,-1.0 0.686 104.3 50.6-114.2 -37.0 -0.2 1.8 6.6 15 15 A I H 3X S+ 0 0 0 -4,-1.9 4,-1.3 1,-0.3 5,-0.2 0.706 107.2 57.5 -75.1 -17.1 1.4 1.3 3.2 16 16 A R H 3< S+ 0 0 114 -4,-0.5 -1,-0.3 -5,-0.3 -3,-0.1 0.363 106.8 50.6 -91.4 6.3 0.2 4.8 2.4 17 17 A E H <4 S+ 0 0 85 -3,-1.3 4,-0.3 3,-0.1 -2,-0.2 0.601 114.8 38.1-113.5 -22.0 2.2 6.0 5.4 18 18 A Y H X S+ 0 0 26 -4,-1.0 4,-0.8 2,-0.1 -2,-0.2 0.718 120.3 45.3 -99.3 -28.5 5.5 4.4 4.7 19 19 A R H X S+ 0 0 22 -4,-1.3 4,-1.4 -5,-0.2 -3,-0.2 0.793 104.7 63.8 -83.1 -29.6 5.4 5.0 0.9 20 20 A T H > S+ 0 0 62 1,-0.2 4,-1.2 2,-0.2 -1,-0.2 0.860 100.9 52.1 -60.1 -37.4 4.3 8.5 1.5 21 21 A K H 4 S+ 0 0 137 -4,-0.3 -1,-0.2 1,-0.2 -2,-0.2 0.890 105.8 53.1 -67.3 -40.3 7.6 9.2 3.2 22 22 A R H < S+ 0 0 164 -4,-0.8 3,-0.3 1,-0.2 -1,-0.2 0.786 100.6 66.0 -65.4 -27.6 9.6 7.8 0.2 23 23 A Q H >< + 0 0 27 -4,-1.4 3,-2.1 1,-0.2 2,-1.4 0.988 59.1 133.7 -57.0 -67.0 7.6 10.2 -2.1 24 24 A T T 3< S- 0 0 108 -4,-1.2 -1,-0.2 1,-0.2 -2,-0.1 -0.274 92.9 -46.0 52.9 -86.2 9.0 13.5 -0.7 25 25 A S T 3 S+ 0 0 128 -2,-1.4 -1,-0.2 -3,-0.3 -2,-0.1 0.048 125.3 42.7-168.5 38.3 9.7 15.0 -4.1 26 26 A G < + 0 0 62 -3,-2.1 -1,-0.2 -4,-0.2 4,-0.1 -0.349 68.5 100.1 169.6 104.0 11.5 12.4 -6.3 27 27 A G - 0 0 47 2,-0.3 -4,-0.1 1,-0.2 -3,-0.0 -0.736 64.8 -19.6-160.8-150.7 10.8 8.7 -6.8 28 28 A P S S+ 0 0 74 0, 0.0 -1,-0.2 0, 0.0 10,-0.1 -0.229 100.9 12.9 -70.5 162.7 9.3 6.1 -9.1 29 29 A V S S- 0 0 53 1,-0.2 -2,-0.3 2,-0.1 6,-0.1 0.422 107.6 -66.4 51.4 161.0 6.6 6.9 -11.7 30 30 A D - 0 0 158 1,-0.1 -1,-0.2 -4,-0.1 -3,-0.1 0.803 61.6-152.4 -47.0 -29.6 5.7 10.4 -12.8 31 31 A A + 0 0 34 4,-0.1 -1,-0.1 -5,-0.1 -2,-0.1 0.857 31.9 166.7 56.6 37.4 4.5 10.8 -9.2 32 32 A G > - 0 0 37 1,-0.1 3,-0.7 2,-0.1 4,-0.1 0.341 57.1 -72.4 -62.8-157.3 2.0 13.4 -10.4 33 33 A P T 3 S+ 0 0 113 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 0.574 135.7 30.4 -80.0 -9.1 -0.9 14.7 -8.2 34 34 A E T > S+ 0 0 149 1,-0.1 3,-1.0 2,-0.0 -2,-0.1 -0.016 74.4 124.8-139.1 32.2 -2.8 11.4 -8.7 35 35 A Y T X> + 0 0 44 -3,-0.7 3,-5.3 1,-0.3 4,-1.0 0.502 39.3 112.2 -68.4 -5.0 0.0 8.9 -9.1 36 36 A Q H 3> + 0 0 76 1,-0.3 4,-2.9 2,-0.2 5,-0.3 0.771 65.7 68.7 -40.6 -29.4 -1.7 7.1 -6.2 37 37 A Q H <> S+ 0 0 158 -3,-1.0 4,-0.6 1,-0.2 -1,-0.3 0.735 101.3 45.2 -64.5 -21.4 -2.4 4.4 -8.8 38 38 A D H <> S+ 0 0 45 -3,-5.3 4,-0.7 2,-0.2 -1,-0.2 0.689 113.9 48.5 -92.9 -22.6 1.4 3.7 -8.8 39 39 A L H X S+ 0 0 6 -4,-1.0 4,-1.7 2,-0.2 -2,-0.2 0.789 112.6 47.1 -85.5 -31.4 1.6 3.8 -5.0 40 40 A D H X S+ 0 0 63 -4,-2.9 4,-2.3 -5,-0.2 -3,-0.2 0.809 108.0 56.4 -78.8 -30.9 -1.4 1.4 -4.5 41 41 A R H X S+ 0 0 126 -4,-0.6 4,-0.7 -5,-0.3 -1,-0.2 0.832 110.6 45.0 -68.9 -32.6 -0.0 -1.0 -7.2 42 42 A E H X S+ 0 0 63 -4,-0.7 4,-0.5 2,-0.2 3,-0.3 0.903 117.9 41.7 -77.6 -43.0 3.2 -1.3 -5.2 43 43 A L H >X S+ 0 0 1 -4,-1.7 4,-0.9 1,-0.2 3,-0.8 0.811 108.9 61.4 -72.8 -29.4 1.5 -1.7 -1.9 44 44 A F H 3X S+ 0 0 102 -4,-2.3 4,-0.8 1,-0.2 -1,-0.2 0.802 92.2 66.5 -65.8 -28.9 -1.0 -4.0 -3.5 45 45 A K H 3X S+ 0 0 88 -4,-0.7 4,-1.4 -3,-0.3 3,-0.5 0.825 93.0 61.6 -61.7 -31.3 1.8 -6.3 -4.4 46 46 A L H XX S+ 0 0 9 -3,-0.8 4,-3.4 -4,-0.5 3,-0.9 0.960 95.4 57.2 -59.6 -53.9 2.3 -7.0 -0.7 47 47 A K H 3X S+ 0 0 53 -4,-0.9 4,-0.9 1,-0.3 -1,-0.2 0.784 107.5 51.8 -48.4 -28.6 -1.2 -8.5 -0.3 48 48 A Q H 3X S+ 0 0 108 -4,-0.8 4,-0.6 -3,-0.5 -1,-0.3 0.854 112.4 42.7 -77.8 -36.6 -0.1 -10.9 -3.0 49 49 A M H < S- 0 0 33 -4,-3.3 3,-1.0 -5,-0.1 -3,-0.2 0.774 91.3-144.9 -77.6 -27.7 4.0 -15.8 2.6 54 54 A D T 3< - 0 0 110 -4,-1.9 -4,-0.1 -5,-0.3 -3,-0.1 0.814 61.2 -70.1 65.8 30.7 1.4 -15.9 5.4 55 55 A M T 3 S+ 0 0 116 -5,-0.2 -1,-0.2 -6,-0.2 -5,-0.1 0.800 105.1 128.9 57.1 29.3 3.1 -12.9 7.0 56 56 A N S < S+ 0 0 146 -3,-1.0 -2,-0.1 1,-0.1 -1,-0.1 0.743 71.9 43.2 -84.1 -25.9 6.0 -15.2 7.9 57 57 A T S S+ 0 0 83 1,-0.2 -1,-0.1 2,-0.0 -3,-0.0 0.898 111.8 53.8 -84.8 -46.6 8.6 -12.8 6.4 58 58 A F - 0 0 34 1,-0.1 -1,-0.2 4,-0.0 3,-0.1 -0.821 67.3-158.0 -95.2 116.1 7.2 -9.6 7.8 59 59 A P S S- 0 0 86 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.706 92.7 -17.7 -63.4 -19.1 6.7 -9.6 11.6 60 60 A N S S- 0 0 85 -3,-0.0 -5,-0.0 0, 0.0 -2,-0.0 0.070 108.5 -76.7 178.6 46.5 4.2 -6.8 11.2 61 61 A F + 0 0 58 -3,-0.1 -3,-0.0 -6,-0.1 4,-0.0 0.942 68.0 162.3 45.3 87.4 4.7 -5.2 7.8 62 62 A T + 0 0 6 2,-0.1 -4,-0.0 3,-0.1 -1,-0.0 0.863 15.4 160.9 -95.7 -79.9 7.8 -3.0 8.3 63 63 A F S S+ 0 0 30 1,-0.2 -5,-0.0 2,-0.1 -1,-0.0 0.776 89.7 28.1 59.3 26.3 9.5 -2.0 5.1 64 64 A E S S+ 0 0 126 1,-0.1 -1,-0.2 0, 0.0 -2,-0.1 0.175 87.2 116.0-177.4 -37.9 11.3 0.7 7.1 65 65 A D S > S- 0 0 70 1,-0.1 3,-1.2 2,-0.1 -1,-0.1 0.015 75.1-113.0 -47.4 158.0 11.6 -0.4 10.7 66 66 A P G > S+ 0 0 103 0, 0.0 3,-3.2 0, 0.0 -1,-0.1 0.642 101.5 92.0 -71.0 -14.4 15.2 -0.9 12.1 67 67 A K G 3 S+ 0 0 86 1,-0.3 -2,-0.1 3,-0.0 -5,-0.0 0.773 71.2 73.2 -50.9 -26.4 14.6 -4.6 12.4 68 68 A F G X + 0 0 96 -3,-1.2 2,-1.6 1,-0.1 3,-0.7 0.752 66.2 109.6 -60.9 -23.8 16.0 -4.8 8.8 69 69 A E T < + 0 0 153 -3,-3.2 -1,-0.1 1,-0.2 -4,-0.0 -0.342 42.7 103.7 -58.0 88.0 19.4 -4.1 10.4 70 70 A V T 3 S+ 0 0 121 -2,-1.6 -1,-0.2 0, 0.0 -2,-0.1 0.542 92.5 3.2-135.3 -45.0 20.8 -7.6 9.8 71 71 A V S < S+ 0 0 102 -3,-0.7 2,-1.0 3,-0.0 -2,-0.1 -0.310 71.8 163.0-147.1 55.8 23.3 -7.5 6.9 72 72 A E + 0 0 161 1,-0.2 3,-0.1 0, 0.0 -3,-0.0 -0.692 56.2 61.3 -83.0 103.9 23.6 -3.9 5.8 73 73 A K + 0 0 205 -2,-1.0 -1,-0.2 1,-0.4 -2,-0.0 -0.015 67.2 101.4 177.3 -53.8 26.7 -3.6 3.7 74 74 A P S S- 0 0 81 0, 0.0 -1,-0.4 0, 0.0 -3,-0.0 -0.102 72.2-122.5 -52.9 151.3 26.6 -5.9 0.5 75 75 A Q 0 0 169 -3,-0.1 -2,-0.0 0, 0.0 0, 0.0 0.986 360.0 360.0 -60.1 -62.7 25.8 -4.2 -2.8 76 76 A S 0 0 172 0, 0.0 -3,-0.0 0, 0.0 0, 0.0 0.930 360.0 360.0 60.6 360.0 22.7 -6.3 -3.6