==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA-BINDING PROTEIN 17-NOV-04 1WCL . COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION PROTEIN NUSA; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR A.EISENMANN,S.SCHWARZ,K.SCHWEIMER,P.ROESCH . 76 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5115.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 81.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 14.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 46 60.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 351 A E >> 0 0 204 0, 0.0 4,-1.0 0, 0.0 3,-0.9 0.000 360.0 360.0 360.0 142.2 -11.7 5.3 -22.1 2 352 A A H 3> + 0 0 76 1,-0.3 4,-1.1 2,-0.2 3,-0.4 0.861 360.0 65.4 -60.4 -31.6 -9.2 6.6 -19.6 3 353 A H H >> S+ 0 0 114 1,-0.2 4,-1.5 2,-0.2 3,-0.6 0.897 97.1 54.7 -58.9 -36.9 -12.0 6.6 -17.0 4 354 A A H <> S+ 0 0 48 -3,-0.9 4,-3.0 1,-0.2 -1,-0.2 0.861 100.3 60.0 -66.2 -31.9 -12.1 2.8 -17.2 5 355 A A H 3X S+ 0 0 10 -4,-1.0 4,-1.7 -3,-0.4 -1,-0.2 0.827 102.3 54.2 -66.3 -27.1 -8.4 2.7 -16.5 6 356 A I H X S+ 0 0 45 -4,-3.0 4,-3.1 2,-0.2 3,-0.6 0.980 108.1 43.9 -52.9 -58.3 -9.8 -1.1 -13.6 9 359 A F H 3<>S+ 0 0 0 -4,-1.7 5,-1.3 1,-0.3 6,-0.6 0.923 114.0 51.6 -53.9 -41.9 -6.7 -0.4 -11.4 10 360 A T H 3<5S+ 0 0 38 -4,-1.7 -1,-0.3 4,-0.2 -2,-0.2 0.852 112.7 46.3 -65.0 -29.8 -9.2 0.1 -8.4 11 361 A K H <<5S+ 0 0 148 -4,-2.7 -2,-0.2 -3,-0.6 -1,-0.2 0.859 133.4 16.4 -80.0 -35.2 -10.7 -3.3 -9.4 12 362 A Y T <5S+ 0 0 56 -4,-3.1 -3,-0.2 -5,-0.3 -2,-0.2 0.851 130.4 43.2-101.8 -64.2 -7.3 -5.0 -9.7 13 363 A L T 5S- 0 0 0 -4,-0.4 -3,-0.2 -5,-0.3 -4,-0.1 0.717 99.9-135.1 -57.7 -14.4 -4.6 -2.8 -8.0 14 364 A D < + 0 0 89 -5,-1.3 -4,-0.2 -6,-0.3 2,-0.2 0.953 60.1 129.0 60.2 46.3 -7.2 -2.5 -5.3 15 365 A I - 0 0 29 -6,-0.6 -1,-0.2 -9,-0.2 2,-0.1 -0.706 62.4 -92.8-123.8 177.7 -6.6 1.3 -5.1 16 366 A D > - 0 0 121 -2,-0.2 4,-3.2 1,-0.1 5,-0.2 -0.473 34.7-112.5 -88.5 164.3 -8.7 4.4 -5.1 17 367 A E H > S+ 0 0 90 1,-0.2 4,-2.9 2,-0.2 5,-0.3 0.939 117.7 57.0 -62.8 -44.3 -9.5 6.3 -8.3 18 368 A D H > S+ 0 0 137 1,-0.2 4,-0.7 2,-0.2 -1,-0.2 0.870 114.9 39.7 -56.2 -33.2 -7.5 9.4 -7.1 19 369 A F H >> S+ 0 0 46 -3,-0.2 4,-1.1 2,-0.2 3,-0.8 0.943 113.4 51.6 -81.9 -51.2 -4.5 7.0 -6.8 20 370 A A H >X S+ 0 0 0 -4,-3.2 4,-2.6 1,-0.3 3,-1.8 0.947 103.8 59.5 -50.5 -50.6 -5.1 4.9 -10.0 21 371 A T H 3X S+ 0 0 35 -4,-2.9 4,-4.7 1,-0.3 5,-0.3 0.898 98.7 59.2 -47.0 -41.2 -5.3 8.1 -12.0 22 372 A V H S+ 0 0 0 -3,-1.8 5,-2.2 -4,-1.1 4,-1.2 0.932 122.4 36.7 -79.2 -45.2 -0.7 5.6 -12.5 24 374 A V H <5S+ 0 0 21 -4,-2.6 -2,-0.2 3,-0.2 -3,-0.2 0.839 114.9 58.2 -74.3 -30.2 -2.8 6.1 -15.7 25 375 A E H <5S+ 0 0 136 -4,-4.7 -3,-0.2 -5,-0.5 -1,-0.2 0.929 105.5 48.5 -65.3 -42.7 -2.0 9.8 -15.6 26 376 A E H <5S- 0 0 110 -4,-1.4 -1,-0.2 -5,-0.3 -2,-0.2 0.848 137.4 -84.1 -67.2 -30.4 1.7 9.1 -15.7 27 377 A G T <5S+ 0 0 42 -4,-1.2 2,-0.5 -5,-0.1 -3,-0.2 0.554 92.3 121.4 132.7 29.6 1.1 6.7 -18.6 28 378 A F < + 0 0 37 -5,-2.2 -3,-0.1 -7,-0.2 -2,-0.1 -0.705 13.3 143.9-120.8 82.1 0.2 3.4 -17.1 29 379 A S + 0 0 69 -2,-0.5 2,-0.4 -5,-0.2 -1,-0.1 0.491 62.2 67.3 -95.5 -2.8 -3.3 2.4 -18.4 30 380 A T S >> S- 0 0 57 -3,-0.1 4,-1.5 1,-0.1 3,-0.5 -0.941 77.9-135.8-119.5 139.2 -2.4 -1.3 -18.5 31 381 A L H 3> S+ 0 0 14 -2,-0.4 4,-3.3 1,-0.2 5,-0.4 0.827 105.1 66.6 -60.5 -26.9 -1.6 -3.6 -15.5 32 382 A E H 3> S+ 0 0 74 2,-0.2 4,-4.5 1,-0.2 5,-0.5 0.950 99.1 48.6 -61.0 -46.4 1.3 -4.9 -17.5 33 383 A E H <> S+ 0 0 79 -3,-0.5 4,-2.1 2,-0.2 -1,-0.2 0.936 115.2 45.4 -60.2 -42.7 3.1 -1.6 -17.4 34 384 A L H < S+ 0 0 0 -4,-1.5 -2,-0.2 2,-0.2 -1,-0.2 0.935 124.1 33.5 -67.0 -44.6 2.5 -1.4 -13.6 35 385 A A H < S+ 0 0 7 -4,-3.3 -2,-0.2 -5,-0.2 -3,-0.2 0.870 120.2 50.0 -80.0 -36.7 3.5 -5.0 -13.0 36 386 A Y H < S+ 0 0 138 -4,-4.5 -3,-0.2 -5,-0.4 -2,-0.2 0.889 97.8 80.1 -70.2 -35.1 6.2 -5.1 -15.8 37 387 A V S < S- 0 0 16 -4,-2.1 3,-0.0 -5,-0.5 0, 0.0 -0.526 89.3-118.6 -73.3 136.6 7.7 -1.9 -14.4 38 388 A P > - 0 0 50 0, 0.0 4,-2.4 0, 0.0 5,-0.2 -0.177 23.9-104.8 -70.4 165.9 10.0 -2.5 -11.4 39 389 A M H > S+ 0 0 23 2,-0.2 4,-4.4 1,-0.2 5,-0.4 0.989 118.9 46.1 -56.2 -64.9 9.4 -1.0 -8.0 40 390 A K H > S+ 0 0 145 1,-0.3 4,-2.5 2,-0.2 5,-0.2 0.939 113.7 49.3 -45.1 -56.2 12.1 1.7 -8.1 41 391 A E H > S+ 0 0 117 1,-0.2 4,-0.6 2,-0.2 -1,-0.3 0.916 118.5 40.8 -52.9 -41.4 11.0 2.7 -11.6 42 392 A L H >< S+ 0 0 0 -4,-2.4 3,-0.8 -3,-0.3 4,-0.3 0.900 113.2 52.6 -75.3 -39.3 7.4 2.9 -10.4 43 393 A L H ><>S+ 0 0 40 -4,-4.4 5,-0.9 -5,-0.2 3,-0.8 0.793 103.9 59.4 -67.3 -23.7 8.4 4.5 -7.1 44 394 A E H 3<5S+ 0 0 143 -4,-2.5 -1,-0.2 -5,-0.4 -2,-0.2 0.771 73.6 97.7 -75.4 -23.5 10.3 7.2 -9.0 45 395 A I T <<5S- 0 0 23 -3,-0.8 -1,-0.2 -4,-0.6 -2,-0.1 0.807 114.9 -62.4 -34.5 -33.4 7.0 8.1 -10.8 46 396 A E T < 5S- 0 0 149 -3,-0.8 -1,-0.1 -4,-0.3 -3,-0.0 -0.325 101.4 -20.5-177.5 -92.1 6.9 10.9 -8.2 47 397 A G T 5S+ 0 0 58 -2,-0.1 -3,-0.1 2,-0.0 2,-0.1 -0.201 76.9 149.0-137.7 46.8 6.6 10.4 -4.4 48 398 A L < - 0 0 24 -5,-0.9 2,-0.1 -6,-0.2 -2,-0.0 -0.419 47.9-110.0 -78.7 158.2 5.2 6.8 -4.0 49 399 A D > - 0 0 92 1,-0.1 4,-2.3 -2,-0.1 5,-0.3 -0.494 21.7-116.6 -86.1 159.2 6.2 4.8 -0.9 50 400 A E H > S+ 0 0 110 2,-0.2 4,-2.0 1,-0.2 5,-0.1 0.958 116.2 36.9 -58.9 -50.4 8.4 1.7 -1.1 51 401 A P H > S+ 0 0 77 0, 0.0 4,-3.9 0, 0.0 5,-0.5 0.934 114.2 54.4 -69.8 -47.1 5.7 -0.6 0.1 52 402 A T H > S+ 0 0 50 1,-0.2 4,-2.1 2,-0.2 -2,-0.2 0.936 116.8 39.1 -54.3 -44.4 2.8 1.1 -1.7 53 403 A V H X S+ 0 0 0 -4,-2.3 4,-2.0 2,-0.2 -1,-0.2 0.882 116.2 52.1 -74.0 -36.0 4.7 0.8 -5.0 54 404 A E H X S+ 0 0 109 -4,-2.0 4,-1.8 -5,-0.3 -2,-0.2 0.929 116.0 39.4 -66.5 -42.7 5.9 -2.7 -4.0 55 405 A A H X S+ 0 0 39 -4,-3.9 4,-2.2 2,-0.2 5,-0.2 0.875 111.1 59.1 -75.3 -35.2 2.4 -3.9 -3.3 56 406 A L H X S+ 0 0 3 -4,-2.1 4,-2.0 -5,-0.5 -2,-0.2 0.942 109.0 44.3 -59.8 -44.6 0.9 -2.0 -6.3 57 407 A R H X S+ 0 0 57 -4,-2.0 4,-1.9 2,-0.2 5,-0.3 0.972 107.5 57.7 -65.4 -51.2 3.2 -4.0 -8.7 58 408 A E H X S+ 0 0 119 -4,-1.8 4,-2.6 1,-0.3 5,-0.2 0.921 108.8 47.8 -45.2 -46.7 2.5 -7.3 -7.0 59 409 A R H X S+ 0 0 94 -4,-2.2 4,-4.6 2,-0.2 5,-0.4 0.942 104.4 60.8 -62.3 -44.9 -1.2 -6.8 -7.7 60 410 A A H X S+ 0 0 0 -4,-2.0 4,-3.3 2,-0.2 5,-0.2 0.956 112.3 36.9 -47.2 -58.1 -0.5 -5.8 -11.3 61 411 A K H X S+ 0 0 101 -4,-1.9 4,-2.9 2,-0.2 -1,-0.2 0.973 118.7 49.7 -61.5 -51.7 1.0 -9.2 -12.0 62 412 A N H X S+ 0 0 90 -4,-2.6 4,-1.3 -5,-0.3 -2,-0.2 0.932 115.0 45.2 -53.9 -43.8 -1.5 -11.1 -9.8 63 413 A A H X S+ 0 0 9 -4,-4.6 4,-2.6 -5,-0.2 3,-0.3 0.945 110.4 53.1 -66.7 -44.5 -4.3 -9.2 -11.6 64 414 A L H X S+ 0 0 23 -4,-3.3 4,-2.6 -5,-0.4 5,-0.2 0.901 100.8 63.2 -58.3 -36.7 -2.7 -9.8 -15.0 65 415 A A H X S+ 0 0 63 -4,-2.9 4,-0.6 -5,-0.2 -1,-0.2 0.949 108.9 39.9 -53.8 -47.4 -2.7 -13.5 -14.1 66 416 A T H >X S+ 0 0 68 -4,-1.3 3,-2.9 -3,-0.3 4,-1.2 0.968 109.4 58.7 -67.7 -50.6 -6.5 -13.5 -13.9 67 417 A I H >X S+ 0 0 38 -4,-2.6 4,-2.4 1,-0.3 3,-0.6 0.904 100.0 59.3 -45.7 -41.5 -6.9 -11.2 -17.0 68 418 A A H 3X S+ 0 0 35 -4,-2.6 4,-1.4 1,-0.2 -1,-0.3 0.820 96.9 62.7 -59.5 -25.9 -5.1 -14.0 -18.9 69 419 A Q H