==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA-BINDING PROTEIN 18-NOV-04 1WCN . COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION PROTEIN NUSA; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR A.EISENMANN,S.SCHWARZ,K.SCHWEIMER,P.ROESCH . 70 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4545.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 44 62.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 15.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 38.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 426 A G > 0 0 42 0, 0.0 3,-0.9 0, 0.0 24,-0.1 0.000 360.0 360.0 360.0 75.0 11.8 -8.4 1.8 2 427 A D T 3 + 0 0 161 1,-0.3 23,-0.1 23,-0.1 22,-0.0 0.914 360.0 63.3 -57.3 -40.1 12.3 -8.4 5.6 3 428 A N T 3 S- 0 0 88 21,-0.2 -1,-0.3 18,-0.1 22,-0.1 0.883 99.4-150.7 -53.4 -35.5 8.9 -10.2 5.9 4 429 A K < - 0 0 129 -3,-0.9 2,-0.1 17,-0.1 17,-0.1 0.648 14.1-100.9 66.6 125.7 10.5 -13.1 4.0 5 430 A P - 0 0 7 0, 0.0 25,-0.2 0, 0.0 24,-0.2 -0.411 37.0-106.7 -76.3 151.4 8.2 -15.3 1.8 6 431 A A >> - 0 0 23 23,-0.7 4,-2.3 22,-0.1 3,-1.1 -0.410 31.5-108.2 -75.6 155.0 7.0 -18.7 3.0 7 432 A D H 3> S+ 0 0 115 1,-0.3 4,-3.8 2,-0.2 5,-0.3 0.872 120.8 62.7 -52.0 -34.6 8.5 -21.8 1.4 8 433 A D H 34 S+ 0 0 92 1,-0.2 4,-0.5 2,-0.2 -1,-0.3 0.923 107.4 42.6 -59.0 -40.1 5.2 -22.3 -0.3 9 434 A L H <4 S+ 0 0 0 -3,-1.1 3,-0.3 2,-0.2 -2,-0.2 0.925 118.2 44.5 -71.9 -43.8 5.7 -19.0 -2.1 10 435 A L H < S+ 0 0 43 -4,-2.3 -2,-0.2 1,-0.2 -1,-0.2 0.892 119.8 41.2 -68.7 -38.3 9.4 -19.7 -2.8 11 436 A N S < S+ 0 0 122 -4,-3.8 2,-0.4 -5,-0.3 -1,-0.2 0.507 90.3 111.4 -88.1 -2.0 8.7 -23.3 -3.9 12 437 A L S > S- 0 0 9 -4,-0.5 3,-1.9 -3,-0.3 48,-0.1 -0.567 78.0-115.9 -73.8 126.4 5.5 -22.2 -5.8 13 438 A E T 3 S+ 0 0 173 -2,-0.4 3,-0.1 1,-0.2 -1,-0.1 -0.365 101.6 34.8 -61.1 135.0 6.1 -22.6 -9.6 14 439 A G T 3 S+ 0 0 27 1,-0.1 2,-0.6 -2,-0.1 -1,-0.2 0.108 99.3 90.2 106.9 -22.8 5.9 -19.2 -11.3 15 440 A V < - 0 0 8 -3,-1.9 -1,-0.1 -6,-0.2 -3,-0.0 -0.904 64.1-155.4-111.3 113.8 7.5 -17.3 -8.4 16 441 A D > - 0 0 112 -2,-0.6 4,-2.1 1,-0.1 5,-0.2 -0.307 37.8 -97.4 -78.3 169.1 11.3 -17.0 -8.5 17 442 A R H > S+ 0 0 173 1,-0.2 4,-1.3 2,-0.2 5,-0.1 0.904 127.3 51.6 -54.4 -38.1 13.4 -16.5 -5.3 18 443 A D H >> S+ 0 0 101 1,-0.2 4,-2.7 2,-0.2 3,-1.2 0.984 106.2 49.6 -64.8 -56.3 13.4 -12.8 -6.2 19 444 A L H 3> S+ 0 0 14 1,-0.3 4,-2.7 2,-0.2 5,-0.3 0.867 103.7 64.9 -52.6 -30.3 9.6 -12.5 -6.6 20 445 A A H 3X S+ 0 0 0 -4,-2.1 4,-3.0 1,-0.2 -1,-0.3 0.937 107.7 38.7 -58.9 -42.5 9.4 -14.2 -3.3 21 446 A F H <>S+ 0 0 4 -4,-2.7 3,-1.5 -5,-0.3 5,-1.4 0.889 116.5 48.5 -88.2 -44.0 5.9 -10.6 -2.6 24 449 A A H ><5S+ 0 0 0 -4,-3.0 3,-1.6 -5,-0.3 -2,-0.2 0.885 107.3 57.5 -64.3 -34.3 7.0 -11.0 1.0 25 450 A A T 3<5S+ 0 0 57 -4,-2.6 -1,-0.3 1,-0.3 -2,-0.2 0.562 102.2 58.6 -72.7 -3.5 8.1 -7.4 1.1 26 451 A R T < 5S- 0 0 127 -3,-1.5 -1,-0.3 2,-0.2 -2,-0.2 0.252 129.6 -91.5-108.3 13.0 4.5 -6.6 0.1 27 452 A G T < 5S+ 0 0 42 -3,-1.6 2,-1.6 1,-0.2 3,-0.2 0.122 97.2 115.8 100.4 -23.0 2.9 -8.2 3.2 28 453 A V < + 0 0 0 -5,-1.4 -2,-0.2 1,-0.2 -1,-0.2 -0.584 25.7 154.1 -82.0 88.1 2.5 -11.6 1.4 29 454 A C + 0 0 40 -2,-1.6 -23,-0.7 -24,-0.2 2,-0.3 0.511 63.2 44.2 -92.5 -3.9 4.8 -13.7 3.6 30 455 A T S > S- 0 0 50 -25,-0.2 4,-1.3 -3,-0.2 3,-0.1 -0.951 85.8-115.0-137.2 158.5 2.9 -16.9 2.9 31 456 A L H > S+ 0 0 1 -2,-0.3 4,-1.6 1,-0.2 3,-0.4 0.903 118.3 56.3 -59.8 -37.5 1.4 -18.6 -0.2 32 457 A E H > S+ 0 0 118 1,-0.2 4,-0.8 2,-0.2 -1,-0.2 0.919 100.7 57.6 -61.6 -39.6 -2.0 -18.2 1.3 33 458 A D H >4 S+ 0 0 44 1,-0.2 3,-0.5 2,-0.2 4,-0.4 0.864 105.0 52.1 -59.8 -31.9 -1.4 -14.4 1.6 34 459 A L H >< S+ 0 0 3 -4,-1.3 3,-1.6 -3,-0.4 -1,-0.2 0.876 98.2 63.3 -73.2 -34.5 -0.8 -14.4 -2.2 35 460 A A H 3< S+ 0 0 0 -4,-1.6 -1,-0.2 1,-0.3 -2,-0.2 0.755 101.9 53.7 -61.5 -18.6 -4.1 -16.2 -2.8 36 461 A E T << S+ 0 0 140 -4,-0.8 -1,-0.3 -3,-0.5 -2,-0.2 0.632 92.8 90.6 -90.3 -13.5 -5.7 -13.0 -1.3 37 462 A Q S < S- 0 0 43 -3,-1.6 2,-0.3 -4,-0.4 3,-0.0 -0.395 70.3-137.9 -78.5 160.6 -3.8 -10.7 -3.8 38 463 A G > - 0 0 22 1,-0.1 4,-2.9 -2,-0.1 3,-0.4 -0.863 23.2-111.5-119.0 154.8 -5.4 -9.7 -7.1 39 464 A I H > S+ 0 0 67 -2,-0.3 4,-1.3 1,-0.3 -1,-0.1 0.897 122.7 49.9 -50.1 -39.7 -3.9 -9.5 -10.6 40 465 A D H > S+ 0 0 127 2,-0.2 4,-0.6 1,-0.2 -1,-0.3 0.885 110.2 49.9 -69.0 -35.4 -4.4 -5.7 -10.3 41 466 A D H >4 S+ 0 0 83 -3,-0.4 3,-0.5 1,-0.2 -2,-0.2 0.916 118.0 38.4 -70.1 -40.1 -2.8 -5.6 -6.9 42 467 A L H >< S+ 0 0 2 -4,-2.9 3,-1.8 1,-0.2 -1,-0.2 0.644 95.3 86.1 -84.1 -12.7 0.3 -7.6 -8.1 43 468 A A H 3< S+ 0 0 35 -4,-1.3 -1,-0.2 -5,-0.4 -2,-0.2 0.868 82.8 60.2 -55.8 -32.6 0.2 -5.8 -11.5 44 469 A D T << S+ 0 0 131 -4,-0.6 -1,-0.3 -3,-0.5 -2,-0.2 0.791 86.5 99.0 -67.1 -23.6 2.3 -3.1 -9.8 45 470 A I S < S- 0 0 19 -3,-1.8 2,-0.4 -4,-0.2 3,-0.4 -0.146 81.4-115.2 -58.3 160.6 5.0 -5.8 -9.2 46 471 A E S S+ 0 0 154 1,-0.2 3,-0.1 -27,-0.0 -1,-0.1 -0.850 94.9 18.6-103.5 134.4 7.9 -5.8 -11.7 47 472 A G S S+ 0 0 69 -2,-0.4 2,-0.5 1,-0.3 -1,-0.2 0.447 98.4 114.8 90.4 -1.8 8.3 -8.9 -14.0 48 473 A L - 0 0 21 -3,-0.4 -1,-0.3 -5,-0.2 2,-0.2 -0.866 51.5-155.9-105.1 133.4 4.7 -9.9 -13.4 49 474 A T > - 0 0 85 -2,-0.5 4,-2.9 -3,-0.1 5,-0.2 -0.587 29.3-111.0-101.6 167.7 2.2 -9.9 -16.3 50 475 A D H > S+ 0 0 110 2,-0.2 4,-1.4 -2,-0.2 -1,-0.1 0.935 121.7 39.6 -63.8 -42.9 -1.6 -9.7 -16.1 51 476 A E H > S+ 0 0 170 2,-0.2 4,-1.7 1,-0.2 5,-0.2 0.922 116.4 50.4 -73.3 -41.7 -2.0 -13.3 -17.2 52 477 A K H > S+ 0 0 58 1,-0.2 4,-3.8 2,-0.2 5,-0.3 0.932 108.6 52.7 -62.3 -42.2 1.0 -14.5 -15.2 53 478 A A H X S+ 0 0 0 -4,-2.9 4,-2.4 1,-0.2 5,-0.4 0.904 105.9 54.4 -61.0 -37.9 -0.5 -12.8 -12.1 54 479 A G H X S+ 0 0 9 -4,-1.4 4,-1.0 -5,-0.2 -1,-0.2 0.892 116.8 37.4 -64.3 -35.8 -3.8 -14.6 -12.7 55 480 A A H X S+ 0 0 47 -4,-1.7 4,-3.7 2,-0.2 5,-0.3 0.942 116.2 50.6 -80.9 -50.3 -1.9 -17.9 -12.7 56 481 A L H X S+ 0 0 11 -4,-3.8 4,-1.9 1,-0.2 5,-0.2 0.965 117.2 40.7 -52.0 -54.8 0.6 -17.1 -10.0 57 482 A I H X S+ 0 0 0 -4,-2.4 4,-2.3 -5,-0.3 -1,-0.2 0.898 117.7 49.1 -62.8 -36.7 -2.1 -16.0 -7.6 58 483 A M H X S+ 0 0 94 -4,-1.0 4,-3.3 -5,-0.4 5,-0.2 0.846 105.4 58.4 -72.0 -30.0 -4.3 -18.9 -8.8 59 484 A A H X S+ 0 0 26 -4,-3.7 4,-1.6 2,-0.2 -2,-0.2 0.925 111.7 40.3 -65.4 -40.3 -1.4 -21.3 -8.2 60 485 A A H X S+ 0 0 0 -4,-1.9 4,-3.4 -5,-0.3 5,-0.4 0.897 116.7 50.0 -75.0 -38.3 -1.3 -20.2 -4.6 61 486 A R H X>S+ 0 0 63 -4,-2.3 4,-4.2 -5,-0.2 5,-0.6 0.940 109.0 52.0 -65.4 -44.4 -5.1 -20.2 -4.3 62 487 A N H <>S+ 0 0 61 -4,-3.3 5,-3.1 3,-0.2 8,-0.3 0.922 119.7 35.1 -58.9 -42.3 -5.3 -23.7 -5.9 63 488 A I H <5S+ 0 0 82 -4,-1.6 5,-0.2 -5,-0.2 -2,-0.2 0.855 126.1 40.5 -81.2 -34.9 -2.8 -25.0 -3.3 64 489 A C H <5S+ 0 0 27 -4,-3.4 -3,-0.2 -5,-0.2 -2,-0.2 0.867 133.1 21.7 -81.4 -36.3 -4.0 -22.8 -0.4 65 490 A W T <5S+ 0 0 153 -4,-4.2 -3,-0.2 -5,-0.4 -4,-0.1 0.829 137.2 24.8 -94.0 -85.9 -7.7 -23.2 -1.3 66 491 A F T < - 0 0 18 -5,-3.1 3,-1.2 -6,-0.4 -3,-0.1 -0.340 51.5 -39.3 79.3-166.1 -5.2 -27.8 -1.8 68 493 A D T 3 S+ 0 0 155 1,-0.3 -1,-0.2 -5,-0.2 -2,-0.1 0.841 128.2 78.7 -65.1 -29.1 -3.7 -31.0 -3.2 69 494 A E T 3 0 0 188 -3,-0.4 -1,-0.3 1,-0.3 -2,-0.2 0.867 360.0 360.0 -47.9 -34.3 -7.2 -32.4 -3.6 70 495 A A < 0 0 79 -3,-1.2 -1,-0.3 -8,-0.3 -2,-0.2 -0.184 360.0 360.0-134.2 360.0 -7.4 -30.3 -6.8