==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN/DNA 10-MAY-04 1WD1 . COMPND 2 MOLECULE: 5'-D(*CP*CP*TP*AP*CP*GP*TP*AP*GP*G)-3'; . SOURCE 2 SYNTHETIC: YES; . AUTHOR T.-P.KO,H.-M.CHU,C.-Y.CHEN,C.-C.CHOU,A.H.-J.WANG . 64 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4947.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 65.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 35.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 3 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 17.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A V 0 0 147 0, 0.0 15,-0.6 0, 0.0 2,-0.2 0.000 360.0 360.0 360.0 -5.7 -0.4 17.7 18.0 2 3 A K E -A 15 0A 92 13,-0.2 2,-0.4 14,-0.1 13,-0.2 -0.685 360.0 -97.9-121.7 166.3 3.3 17.6 19.0 3 4 A V E -A 14 0A 2 11,-3.0 11,-2.1 -2,-0.2 2,-0.5 -0.719 35.8-156.7 -82.8 132.1 6.8 18.6 18.0 4 5 A K E +A 13 0A 124 -2,-0.4 2,-0.3 44,-0.3 9,-0.2 -0.925 27.8 145.8-108.4 126.1 8.7 15.7 16.3 5 6 A F E -A 12 0A 6 7,-2.4 7,-2.0 -2,-0.5 2,-0.5 -0.865 43.7-111.0-149.2-176.8 12.5 15.9 16.4 6 7 A K E +A 11 0A 148 37,-0.8 2,-0.5 -2,-0.3 37,-0.3 -0.989 27.9 179.2-124.0 131.8 15.6 14.0 16.6 7 8 A Y - 0 0 74 3,-3.1 3,-0.1 -2,-0.5 -2,-0.0 -0.969 68.5 -23.7-135.4 122.2 17.8 14.1 19.5 8 9 A K S S- 0 0 180 -2,-0.5 -1,-0.1 1,-0.2 3,-0.1 0.947 133.3 -36.4 45.8 54.3 21.0 12.2 19.9 9 10 A G S S+ 0 0 82 1,-0.2 2,-0.3 -3,-0.1 -1,-0.2 0.775 119.7 89.4 75.2 27.6 19.9 9.6 17.4 10 11 A E - 0 0 117 -3,-0.1 -3,-3.1 2,-0.0 2,-0.3 -0.994 69.0-117.5-157.6 153.5 16.2 9.2 18.0 11 12 A E E +A 6 0A 97 -2,-0.3 2,-0.3 -5,-0.3 -5,-0.2 -0.612 37.0 176.5 -86.4 147.4 12.9 10.6 17.1 12 13 A K E -A 5 0A 53 -7,-2.0 -7,-2.4 -2,-0.3 2,-0.4 -0.975 18.8-153.7-150.8 157.2 10.9 12.2 19.9 13 14 A E E +A 4 0A 110 -2,-0.3 2,-0.4 -9,-0.2 -9,-0.2 -0.999 13.0 178.1-141.7 133.5 7.7 13.9 20.3 14 15 A V E -A 3 0A 6 -11,-2.1 -11,-3.0 -2,-0.4 2,-0.3 -0.989 31.3-116.5-137.4 143.8 6.8 16.4 22.8 15 16 A D E > -A 2 0A 46 -2,-0.4 3,-2.9 -13,-0.2 4,-0.2 -0.636 26.3-125.2 -82.7 136.3 3.6 18.4 23.3 16 17 A T G > S+ 0 0 28 -15,-0.6 3,-3.0 1,-0.3 -1,-0.1 0.852 109.1 69.2 -49.6 -39.4 4.0 22.1 22.9 17 18 A S G 3 S+ 0 0 106 1,-0.3 -1,-0.3 16,-0.1 17,-0.1 0.760 93.2 63.4 -54.3 -19.5 2.6 22.7 26.3 18 19 A K G < S+ 0 0 70 -3,-2.9 16,-2.9 15,-0.1 -1,-0.3 0.529 76.7 112.8 -82.7 -5.4 5.8 21.0 27.6 19 20 A I E < +B 33 0B 23 -3,-3.0 14,-0.3 14,-0.2 3,-0.1 -0.443 36.2 175.4 -74.6 140.9 8.1 23.6 26.3 20 21 A K E + 0 0 131 12,-2.3 2,-0.4 1,-0.4 13,-0.2 0.761 67.5 6.1 -99.3 -61.9 10.0 25.7 28.7 21 22 A K E -B 32 0B 134 11,-0.7 11,-2.7 2,-0.0 -1,-0.4 -0.985 58.4-175.5-137.4 145.5 12.1 27.8 26.5 22 23 A V E +B 31 0B 11 -2,-0.4 2,-0.3 9,-0.3 9,-0.2 -0.962 9.4 161.3-137.9 146.6 12.7 28.4 22.9 23 24 A W E -B 30 0B 82 7,-2.3 7,-2.8 -2,-0.3 2,-0.3 -0.973 34.3-101.5-161.2 167.8 15.1 30.3 20.8 24 25 A R E +B 29 0B 92 -2,-0.3 2,-0.3 5,-0.2 5,-0.2 -0.763 23.4 178.4-105.7 142.9 16.4 30.6 17.4 25 26 A V E > -B 28 0B 71 3,-2.9 3,-2.6 -2,-0.3 2,-0.4 -0.814 69.1 -60.4-137.8 91.3 19.8 29.4 16.0 26 27 A G T 3 S- 0 0 64 1,-0.3 -1,-0.1 -2,-0.3 0, 0.0 -0.562 119.1 -21.9 68.6-128.9 20.1 30.2 12.3 27 28 A K T 3 S+ 0 0 163 -2,-0.4 19,-1.7 -3,-0.1 2,-0.3 0.502 121.4 101.4 -91.5 -1.0 17.2 28.3 10.7 28 29 A M E < -BC 25 45B 78 -3,-2.6 -3,-2.9 17,-0.2 2,-0.7 -0.621 63.0-147.1 -87.0 138.4 17.0 26.0 13.7 29 30 A V E -BC 24 44B 0 15,-2.8 15,-2.1 -2,-0.3 2,-0.3 -0.905 26.1-170.7-102.4 113.6 14.4 26.3 16.5 30 31 A S E +BC 23 43B 11 -7,-2.8 -7,-2.3 -2,-0.7 2,-0.3 -0.714 11.0 155.1-106.3 158.0 16.0 25.2 19.6 31 32 A F E -BC 22 42B 0 11,-1.8 11,-2.4 -2,-0.3 2,-0.3 -0.999 37.8-123.8-171.8 166.6 14.4 24.5 23.0 32 33 A T E -BC 21 41B 22 -11,-2.7 -12,-2.3 -2,-0.3 -11,-0.7 -0.832 30.1-174.1-115.0 158.4 14.1 23.0 26.4 33 34 A Y E -BC 19 40B 22 7,-1.6 7,-2.6 -2,-0.3 -14,-0.2 -0.992 30.2 -95.6-154.9 148.8 11.0 21.1 27.5 34 35 A D E + C 0 39B 70 -16,-2.9 2,-0.3 -2,-0.3 5,-0.2 -0.419 30.9 177.1 -70.9 127.5 9.7 19.5 30.7 35 36 A D E > S- C 0 38B 69 3,-3.1 3,-1.1 -2,-0.2 -1,-0.1 -0.646 79.2 -49.7-128.8 70.0 10.3 15.8 31.1 36 37 A N T 3 S- 0 0 152 -2,-0.3 3,-0.1 1,-0.3 -2,-0.1 0.715 113.8 -44.1 72.4 25.0 8.8 15.1 34.6 37 38 A G T 3 S+ 0 0 68 1,-0.7 -1,-0.3 0, 0.0 2,-0.1 -0.023 125.3 107.7 104.6 -27.6 10.6 18.0 36.4 38 39 A K E < S-C 35 0B 151 -3,-1.1 -3,-3.1 1,-0.0 2,-0.7 -0.476 76.1-121.4 -76.3 152.4 13.7 16.8 34.4 39 40 A T E -C 34 0B 71 -5,-0.2 -5,-0.2 -2,-0.1 -1,-0.0 -0.802 27.4-165.1-109.9 103.6 14.7 19.2 31.6 40 41 A G E -C 33 0B 11 -7,-2.6 -7,-1.6 -2,-0.7 2,-0.4 -0.212 7.7-143.6 -75.8 168.1 14.8 17.8 28.1 41 42 A R E +C 32 0B 118 -9,-0.2 2,-0.3 2,-0.0 -9,-0.2 -0.992 24.5 162.7-131.2 135.4 16.4 19.3 25.0 42 43 A G E -C 31 0B 2 -11,-2.4 -11,-1.8 -2,-0.4 2,-0.3 -0.991 14.1-169.0-151.2 157.6 15.2 19.2 21.5 43 44 A A E +C 30 0B 29 -37,-0.3 -37,-0.8 -2,-0.3 2,-0.3 -0.991 7.8 171.5-148.0 144.5 15.6 21.0 18.2 44 45 A V E -C 29 0B 14 -15,-2.1 -15,-2.8 -2,-0.3 2,-0.1 -0.972 37.7 -97.8-147.0 156.5 13.8 21.0 14.9 45 46 A S E > -C 28 0B 46 -2,-0.3 4,-0.7 -17,-0.2 3,-0.4 -0.401 32.7-118.4 -71.5 154.6 14.1 23.1 11.7 46 47 A E T >4 S+ 0 0 62 -19,-1.7 3,-0.5 1,-0.2 -1,-0.1 0.843 115.1 61.2 -67.6 -25.4 11.6 25.9 11.2 47 48 A K T 34 S+ 0 0 184 1,-0.3 -1,-0.2 -20,-0.2 -19,-0.0 0.911 114.1 35.5 -68.9 -30.4 10.2 24.2 8.1 48 49 A D T 34 S+ 0 0 116 -3,-0.4 -44,-0.3 2,-0.1 -1,-0.3 0.454 96.3 106.9 -97.3 2.7 9.3 21.3 10.4 49 50 A A S << S- 0 0 12 -4,-0.7 2,-0.2 -3,-0.5 -46,-0.0 -0.637 70.2-127.2 -82.6 135.8 8.4 23.5 13.4 50 51 A P >> - 0 0 47 0, 0.0 4,-1.8 0, 0.0 3,-0.7 -0.623 22.5-108.1 -83.1 145.1 4.6 23.8 14.0 51 52 A K H >> S+ 0 0 155 1,-0.2 4,-3.0 -2,-0.2 3,-0.6 0.858 114.7 55.7 -34.0 -71.0 2.8 27.2 14.3 52 53 A E H 3> S+ 0 0 91 1,-0.3 4,-1.8 2,-0.2 -1,-0.2 0.871 111.9 46.2 -31.1 -57.8 2.1 27.3 18.0 53 54 A L H <> S+ 0 0 0 -3,-0.7 4,-2.5 1,-0.3 -1,-0.3 0.857 110.2 51.0 -56.1 -44.6 5.9 26.7 18.6 54 55 A L H