==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 25-MAY-04 1WEV . COMPND 2 MOLECULE: RIKEN CDNA 1110020M19; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA, . 88 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7932.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 31 35.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 4.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 12.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 134 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 120.4 -20.1 29.9 27.0 2 2 A S - 0 0 131 2,-0.0 2,-0.5 0, 0.0 0, 0.0 -0.618 360.0-165.6-174.7 108.3 -19.4 29.0 23.3 3 3 A S + 0 0 124 -2,-0.2 2,-0.3 2,-0.0 0, 0.0 -0.864 19.0 161.8-104.1 130.8 -16.3 29.5 21.3 4 4 A G - 0 0 83 -2,-0.5 2,-0.3 2,-0.0 -2,-0.0 -0.996 21.1-153.5-150.3 142.1 -16.3 29.2 17.5 5 5 A S - 0 0 127 -2,-0.3 2,-0.4 0, 0.0 3,-0.0 -0.812 5.2-157.3-114.8 155.6 -14.2 30.2 14.6 6 6 A S + 0 0 125 -2,-0.3 -2,-0.0 1,-0.1 2,-0.0 -0.989 54.2 29.0-136.5 126.5 -15.1 30.9 10.9 7 7 A G - 0 0 75 -2,-0.4 2,-0.3 2,-0.0 -1,-0.1 0.197 60.8-133.9 102.7 137.3 -12.7 30.7 7.9 8 8 A A - 0 0 86 -3,-0.0 2,-0.1 1,-0.0 -2,-0.0 -0.838 13.1-125.6-123.2 160.9 -9.6 28.8 7.2 9 9 A D - 0 0 134 -2,-0.3 2,-0.5 1,-0.0 -2,-0.0 -0.415 23.3-112.1 -97.6 175.9 -6.2 29.7 5.7 10 10 A D + 0 0 132 -2,-0.1 2,-0.3 4,-0.1 3,-0.1 -0.949 50.7 132.5-116.0 123.5 -4.2 28.2 2.8 11 11 A F >> - 0 0 151 -2,-0.5 3,-1.8 1,-0.1 4,-1.2 -0.976 69.7 -82.6-159.3 166.6 -1.0 26.2 3.4 12 12 A A H 3> S+ 0 0 29 1,-0.3 4,-1.0 -2,-0.3 5,-0.4 0.872 126.2 58.5 -39.7 -49.5 0.8 23.0 2.4 13 13 A M H >4 S+ 0 0 119 1,-0.2 3,-0.5 2,-0.2 -1,-0.3 0.870 100.4 58.1 -50.7 -40.5 -1.2 21.2 5.1 14 14 A E H <4 S+ 0 0 114 -3,-1.8 -1,-0.2 1,-0.2 -2,-0.2 0.951 92.6 65.7 -55.9 -53.7 -4.4 22.3 3.3 15 15 A M H 3< S- 0 0 136 -4,-1.2 -1,-0.2 -3,-0.2 -2,-0.2 0.844 92.4-148.9 -35.9 -47.4 -3.4 20.6 0.0 16 16 A G << + 0 0 52 -4,-1.0 -1,-0.1 -3,-0.5 -3,-0.1 0.877 56.2 126.8 75.4 38.7 -3.7 17.3 1.9 17 17 A L + 0 0 86 -5,-0.4 2,-0.3 6,-0.0 -4,-0.1 0.094 41.8 106.6-112.2 19.8 -1.0 15.5 -0.1 18 18 A A S S- 0 0 22 -5,-0.2 24,-0.4 1,-0.1 7,-0.2 -0.735 72.3-108.4-101.4 149.9 1.1 14.4 2.9 19 19 A C - 0 0 6 5,-1.7 24,-0.3 -2,-0.3 -1,-0.1 0.073 19.8-124.3 -62.4-179.3 1.3 10.9 4.3 20 20 A V S S+ 0 0 57 22,-2.3 23,-0.1 3,-0.1 -1,-0.1 0.592 99.0 63.3-104.1 -17.5 -0.4 9.8 7.6 21 21 A V S S- 0 0 74 21,-0.4 22,-0.1 1,-0.1 -3,-0.0 0.995 129.1 -0.6 -69.5 -75.9 2.8 8.4 9.2 22 22 A C S S- 0 0 59 2,-0.1 -1,-0.1 22,-0.0 -2,-0.1 0.574 94.6-128.9 -91.7 -12.2 5.0 11.5 9.6 23 23 A R + 0 0 170 1,-0.2 2,-0.2 19,-0.2 -3,-0.1 0.965 62.2 128.0 62.5 54.8 2.5 13.8 7.9 24 24 A Q - 0 0 91 2,-0.1 -5,-1.7 -7,-0.1 -1,-0.2 -0.792 58.6-145.3-132.4 175.1 4.9 15.3 5.4 25 25 A M + 0 0 64 -2,-0.2 8,-0.1 -7,-0.2 -1,-0.1 0.481 55.0 128.3-118.1 -12.0 5.2 15.8 1.6 26 26 A T + 0 0 111 6,-0.0 2,-0.3 1,-0.0 -2,-0.1 -0.248 34.9 166.8 -51.2 122.7 8.9 15.3 1.2 27 27 A V + 0 0 64 17,-0.0 2,-0.3 18,-0.0 5,-0.3 -0.902 11.0 159.1-137.7 165.9 9.5 12.8 -1.5 28 28 A A > - 0 0 56 -2,-0.3 3,-1.2 3,-0.1 2,-0.1 -0.975 56.7 -38.5-174.7 169.0 12.3 11.5 -3.7 29 29 A S T 3 S- 0 0 130 1,-0.3 25,-0.0 -2,-0.3 -2,-0.0 -0.152 134.2 -3.5 -43.2 101.2 13.4 8.6 -5.9 30 30 A G T 3 S+ 0 0 37 -2,-0.1 2,-0.4 3,-0.0 -1,-0.3 -0.191 122.2 79.5 104.4 -41.3 12.1 5.7 -3.9 31 31 A N < + 0 0 60 -3,-1.2 -2,-0.2 14,-0.1 -3,-0.1 -0.239 68.4 137.0 -94.0 44.9 10.7 7.7 -1.0 32 32 A Q - 0 0 77 -2,-0.4 13,-2.7 -5,-0.3 14,-0.5 -0.059 54.3 -98.5 -79.2-174.7 7.6 8.7 -3.0 33 33 A L E -A 44 0A 38 11,-0.3 2,-0.3 12,-0.1 11,-0.2 -0.755 30.4-161.5-109.2 156.5 4.0 8.8 -1.7 34 34 A V E -A 43 0A 11 9,-0.5 9,-2.9 -2,-0.3 2,-0.5 -0.971 9.0-144.1-137.5 151.8 1.2 6.3 -2.0 35 35 A E E -A 42 0A 103 -2,-0.3 29,-0.3 7,-0.2 7,-0.2 -0.968 18.3-133.8-121.0 126.4 -2.6 6.4 -1.7 36 36 A C - 0 0 0 5,-2.1 29,-0.2 -2,-0.5 27,-0.0 -0.255 2.9-144.8 -71.3 161.9 -4.6 3.5 -0.3 37 37 A Q S S+ 0 0 83 27,-1.3 28,-0.1 3,-0.1 -1,-0.1 0.702 95.1 36.1 -98.8 -26.7 -7.8 2.2 -2.0 38 38 A E S S+ 0 0 111 26,-0.3 27,-0.1 3,-0.1 -2,-0.0 0.931 134.0 19.6 -88.8 -70.6 -9.7 1.3 1.2 39 39 A C S S- 0 0 40 27,-0.1 3,-0.1 2,-0.1 -2,-0.1 0.734 91.9-142.4 -73.1 -22.8 -8.8 3.9 3.8 40 40 A H + 0 0 119 1,-0.2 2,-0.3 26,-0.0 -3,-0.1 0.845 47.5 150.1 62.7 34.4 -7.7 6.3 1.0 41 41 A N - 0 0 65 1,-0.0 -5,-2.1 2,-0.0 2,-0.4 -0.708 50.1-112.6-100.2 151.2 -4.8 7.4 3.3 42 42 A L E -A 35 0A 37 -24,-0.4 -22,-2.3 -2,-0.3 2,-0.4 -0.684 33.6-178.5 -85.1 129.9 -1.4 8.7 2.1 43 43 A Y E -A 34 0A 26 -9,-2.9 -9,-0.5 -2,-0.4 2,-0.2 -0.951 26.8-127.0-134.1 114.4 1.6 6.5 3.0 44 44 A H E > -A 33 0A 4 -2,-0.4 4,-2.8 -11,-0.2 -11,-0.3 -0.378 26.0-120.7 -60.0 124.4 5.1 7.4 2.1 45 45 A Q T 4 S+ 0 0 1 -13,-2.7 7,-1.8 1,-0.2 -1,-0.2 0.759 116.2 35.4 -35.6 -30.3 6.7 4.5 0.2 46 46 A D T 4 S+ 0 0 100 -14,-0.5 -1,-0.2 5,-0.2 -15,-0.1 0.925 109.6 56.5 -90.2 -64.8 9.2 4.6 3.1 47 47 A C T 4 S+ 0 0 46 -16,-0.1 -2,-0.2 4,-0.0 -1,-0.1 0.811 96.4 87.5 -36.4 -39.1 7.1 5.5 6.2 48 48 A H S < S- 0 0 12 -4,-2.8 4,-0.1 2,-0.1 18,-0.0 -0.223 88.5-121.7 -63.6 155.0 5.0 2.5 5.3 49 49 A K S S+ 0 0 186 1,-0.1 2,-0.7 2,-0.1 -1,-0.1 0.997 98.4 58.6 -60.4 -68.4 6.1 -0.9 6.6 50 50 A P S S- 0 0 72 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.536 99.6-115.6 -69.8 107.6 6.5 -2.8 3.3 51 51 A Q - 0 0 177 -2,-0.7 2,-0.2 1,-0.1 -5,-0.2 -0.207 34.7-142.7 -46.6 101.7 9.2 -0.9 1.3 52 52 A V - 0 0 11 -7,-1.8 -20,-0.2 -2,-0.3 2,-0.2 -0.524 10.9-136.7 -74.3 134.5 7.0 0.3 -1.6 53 53 A T > - 0 0 70 -2,-0.2 4,-1.7 1,-0.1 5,-0.2 -0.520 16.6-119.7 -89.9 158.8 8.8 0.3 -5.0 54 54 A D H > S+ 0 0 78 1,-0.2 4,-1.8 2,-0.2 5,-0.1 0.854 114.6 55.6 -63.9 -35.5 8.6 3.0 -7.6 55 55 A K H > S+ 0 0 151 2,-0.2 4,-2.6 1,-0.2 -1,-0.2 0.885 104.0 54.3 -64.8 -39.6 7.1 0.5 -10.1 56 56 A E H 4 S+ 0 0 76 1,-0.2 -2,-0.2 2,-0.2 -1,-0.2 0.960 108.7 46.3 -59.2 -54.5 4.3 -0.4 -7.7 57 57 A V H < S+ 0 0 44 -4,-1.7 -1,-0.2 1,-0.2 -2,-0.2 0.864 113.0 52.1 -56.7 -37.7 3.1 3.2 -7.2 58 58 A N H < S+ 0 0 107 -4,-1.8 -1,-0.2 -5,-0.2 -2,-0.2 0.933 80.6 103.1 -65.3 -47.4 3.3 3.6 -11.0 59 59 A D >< - 0 0 68 -4,-2.6 3,-1.2 1,-0.2 -4,-0.0 -0.124 53.7-169.9 -42.0 102.3 1.2 0.6 -11.7 60 60 A P T 3 S+ 0 0 118 0, 0.0 -1,-0.2 0, 0.0 -4,-0.0 0.781 85.8 49.4 -69.8 -27.8 -2.1 2.3 -12.6 61 61 A R T 3 S+ 0 0 246 2,-0.1 2,-0.4 -3,-0.0 -2,-0.1 0.027 91.2 109.5-100.2 25.7 -3.9 -1.1 -12.5 62 62 A L < - 0 0 61 -3,-1.2 2,-0.9 -6,-0.2 -6,-0.0 -0.860 62.8-140.6-106.5 137.1 -2.4 -2.0 -9.2 63 63 A V - 0 0 81 -2,-0.4 2,-0.4 2,-0.0 -27,-0.1 -0.819 19.8-165.3 -99.2 101.8 -4.5 -2.2 -6.0 64 64 A W - 0 0 22 -2,-0.9 -27,-1.3 -29,-0.3 2,-0.4 -0.715 6.4-175.7 -89.2 133.1 -2.4 -0.8 -3.1 65 65 A Y - 0 0 89 -2,-0.4 -29,-0.1 -29,-0.2 -2,-0.0 -0.966 21.0-131.8-134.0 117.8 -3.6 -1.5 0.5 66 66 A C >> - 0 0 0 -2,-0.4 3,-2.7 1,-0.1 4,-2.2 -0.344 28.9-111.5 -65.6 144.2 -1.9 -0.1 3.6 67 67 A A H 3>>S+ 0 0 35 1,-0.3 4,-3.2 2,-0.2 5,-0.5 0.892 116.0 68.0 -39.3 -56.2 -1.2 -2.6 6.4 68 68 A R H 3>5S+ 0 0 171 1,-0.2 4,-0.6 2,-0.2 -1,-0.3 0.803 114.3 31.2 -35.1 -38.6 -3.8 -1.0 8.6 69 69 A C H <>5S+ 0 0 6 -3,-2.7 4,-2.6 2,-0.2 5,-0.4 0.904 113.2 59.2 -88.3 -50.8 -6.3 -2.4 6.0 70 70 A T H X5S+ 0 0 51 -4,-2.2 4,-1.0 1,-0.3 -2,-0.2 0.866 110.6 45.5 -45.8 -42.7 -4.4 -5.5 5.0 71 71 A R H <5S+ 0 0 158 -4,-3.2 -1,-0.3 -5,-0.2 -2,-0.2 0.855 117.0 45.6 -71.0 -36.0 -4.5 -6.7 8.6 72 72 A Q H < S- 0 0 57 -3,-0.3 3,-2.5 1,-0.1 -2,-0.1 0.714 86.2-153.3 -50.7 -19.8 -10.8 -15.6 8.0 77 77 A A T 3 - 0 0 49 1,-0.3 -1,-0.1 2,-0.0 3,-0.1 0.897 58.2 -71.5 42.6 52.7 -7.5 -15.5 9.9 78 78 A Q T 3 S+ 0 0 203 1,-0.1 -1,-0.3 2,-0.0 2,-0.2 0.798 107.8 129.3 34.4 38.4 -6.3 -18.4 7.8 79 79 A K < - 0 0 158 -3,-2.5 -1,-0.1 1,-0.2 -4,-0.0 -0.559 68.8 -51.9-112.1 177.8 -8.8 -20.5 9.7 80 80 A N - 0 0 144 -2,-0.2 2,-0.6 -3,-0.1 -1,-0.2 -0.201 57.1-127.5 -51.0 134.2 -11.6 -22.9 8.8 81 81 A Q + 0 0 145 1,-0.2 3,-0.1 -3,-0.1 -1,-0.1 -0.790 27.3 179.2 -92.3 117.9 -14.0 -21.4 6.3 82 82 A K - 0 0 182 -2,-0.6 2,-0.3 1,-0.3 -1,-0.2 0.942 68.6 -10.1 -80.0 -53.1 -17.6 -21.5 7.3 83 83 A S S S+ 0 0 96 2,-0.0 -1,-0.3 0, 0.0 0, 0.0 -0.997 73.7 123.9-150.3 146.0 -19.2 -19.8 4.3 84 84 A G - 0 0 54 -2,-0.3 2,-0.4 -3,-0.1 -3,-0.0 -0.410 51.8-111.7 159.0 121.6 -18.0 -17.9 1.2 85 85 A P - 0 0 131 0, 0.0 2,-0.4 0, 0.0 -2,-0.0 -0.523 34.8-131.1 -69.7 118.8 -18.3 -18.1 -2.6 86 86 A S + 0 0 131 -2,-0.4 2,-0.3 1,-0.0 -2,-0.0 -0.576 34.2 175.8 -74.6 124.3 -14.9 -19.0 -4.1 87 87 A S 0 0 116 -2,-0.4 -1,-0.0 1,-0.0 0, 0.0 -0.863 360.0 360.0-127.6 161.7 -14.0 -16.7 -7.0 88 88 A G 0 0 125 -2,-0.3 -1,-0.0 0, 0.0 0, 0.0 -0.344 360.0 360.0 -57.4 360.0 -11.1 -16.2 -9.3