==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER UNKNOWN FUNCTION 26-MAY-04 1WFK . COMPND 2 MOLECULE: ZINC FINGER, FYVE DOMAIN CONTAINING 19; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL . 88 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7211.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 35 39.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 13.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 10.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 126 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -42.1 35.4 11.3 -3.5 2 2 A S + 0 0 128 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.237 360.0 65.4-115.0 42.3 36.4 7.7 -3.5 3 3 A S + 0 0 111 1,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.986 33.2 127.9-159.9 151.1 33.0 6.3 -2.3 4 4 A G + 0 0 80 -2,-0.3 2,-0.4 1,-0.1 -1,-0.1 0.315 39.0 115.5 162.1 41.8 29.4 5.9 -3.4 5 5 A S - 0 0 123 2,-0.0 2,-0.3 0, 0.0 -1,-0.1 -0.816 36.5-177.9-132.3 93.2 28.2 2.3 -3.2 6 6 A S - 0 0 102 -2,-0.4 2,-1.0 1,-0.0 0, 0.0 -0.665 25.0-135.6 -92.0 145.4 25.4 1.7 -0.7 7 7 A G + 0 0 58 -2,-0.3 2,-0.9 2,-0.0 -1,-0.0 -0.634 31.1 171.9-101.3 76.3 23.9 -1.7 -0.1 8 8 A M + 0 0 140 -2,-1.0 2,-0.1 3,-0.0 3,-0.1 -0.749 10.9 171.6 -88.8 104.5 20.2 -1.1 -0.1 9 9 A E - 0 0 129 -2,-0.9 2,-0.7 1,-0.1 -2,-0.0 -0.315 50.7 -46.5-100.6-174.0 18.4 -4.4 0.0 10 10 A S S S+ 0 0 81 -2,-0.1 9,-1.8 9,-0.1 2,-0.2 -0.382 78.7 156.7 -58.5 102.7 14.8 -5.5 0.5 11 11 A R B -A 18 0A 109 -2,-0.7 2,-0.3 7,-0.2 7,-0.2 -0.570 44.5 -79.9-120.0-175.9 13.7 -3.3 3.4 12 12 A C > - 0 0 9 5,-1.1 4,-0.7 -2,-0.2 23,-0.3 -0.671 22.7-142.5 -90.7 143.0 10.5 -1.9 4.9 13 13 A Y T 4 S+ 0 0 150 21,-2.8 22,-0.1 -2,-0.3 -1,-0.1 0.046 99.5 41.9 -90.2 26.1 8.9 1.2 3.5 14 14 A G T 4 S+ 0 0 55 3,-0.1 -1,-0.2 20,-0.1 21,-0.1 0.557 133.1 9.3-136.2 -40.3 7.9 2.4 6.9 15 15 A C T 4 S- 0 0 70 2,-0.1 -2,-0.1 0, 0.0 20,-0.1 0.450 91.6-121.1-122.9 -10.6 10.8 1.8 9.3 16 16 A A < + 0 0 54 -4,-0.7 2,-0.3 1,-0.2 -3,-0.1 0.775 55.4 161.3 72.5 26.9 13.5 0.8 6.8 17 17 A V - 0 0 46 -6,-0.1 -5,-1.1 1,-0.1 2,-0.3 -0.604 41.3-117.4 -83.4 140.0 14.0 -2.5 8.5 18 18 A K B -A 11 0A 84 -2,-0.3 2,-0.5 -7,-0.2 -7,-0.2 -0.595 26.5-120.9 -78.8 132.6 15.7 -5.4 6.6 19 19 A F + 0 0 24 -9,-1.8 2,-0.3 -2,-0.3 5,-0.2 -0.612 48.6 152.2 -76.8 121.5 13.5 -8.4 6.0 20 20 A T - 0 0 47 3,-1.6 0, 0.0 -2,-0.5 0, 0.0 -0.853 63.3 -75.3-141.0 175.5 15.1 -11.6 7.5 21 21 A L S S+ 0 0 144 1,-0.3 3,-0.2 -2,-0.3 -2,-0.0 0.846 137.0 38.2 -40.0 -42.8 14.1 -15.0 8.9 22 22 A F S S+ 0 0 185 1,-0.2 2,-0.8 2,-0.0 -1,-0.3 0.892 119.9 48.5 -77.8 -42.3 12.9 -13.1 12.0 23 23 A K S S- 0 0 76 -5,-0.2 -3,-1.6 14,-0.0 -1,-0.2 -0.817 82.4-157.9-104.6 95.7 11.5 -10.1 10.1 24 24 A K - 0 0 129 -2,-0.8 13,-0.7 -5,-0.2 2,-0.4 -0.187 19.1-111.8 -66.4 162.5 9.3 -11.5 7.3 25 25 A E E -B 36 0B 116 11,-0.2 2,-0.3 -6,-0.1 11,-0.2 -0.844 33.4-172.1-102.7 133.2 8.5 -9.3 4.2 26 26 A Y E -B 35 0B 76 9,-3.2 9,-2.6 -2,-0.4 2,-0.4 -0.813 10.3-142.9-120.6 161.6 5.0 -8.1 3.6 27 27 A G E -B 34 0B 51 -2,-0.3 7,-0.2 7,-0.2 2,-0.1 -0.961 9.2-136.6-128.5 145.2 3.3 -6.3 0.7 28 28 A C - 0 0 14 5,-2.2 28,-0.2 -2,-0.4 27,-0.1 -0.463 2.1-156.2 -92.9 167.2 0.7 -3.5 0.5 29 29 A K S S+ 0 0 109 26,-0.2 -1,-0.1 -2,-0.1 27,-0.1 0.751 87.8 43.9-109.3 -42.4 -2.3 -3.3 -1.8 30 30 A N S S+ 0 0 42 1,-0.1 26,-0.0 24,-0.1 -2,-0.0 0.998 133.1 16.0 -67.2 -74.3 -3.1 0.4 -2.0 31 31 A C S S- 0 0 32 26,-0.1 -1,-0.1 2,-0.1 25,-0.0 0.833 96.6-138.3 -70.2 -33.0 0.4 2.0 -2.3 32 32 A G + 0 0 47 1,-0.2 2,-0.2 0, 0.0 -3,-0.1 0.915 51.2 138.7 75.0 44.4 1.9 -1.4 -3.4 33 33 A R - 0 0 90 -20,-0.0 -5,-2.2 0, 0.0 2,-0.5 -0.689 57.9 -95.3-116.2 170.1 5.1 -1.1 -1.3 34 34 A A E +B 27 0B 35 -2,-0.2 -21,-2.8 -7,-0.2 2,-0.3 -0.738 47.9 167.8 -89.8 129.0 7.1 -3.5 0.8 35 35 A F E -B 26 0B 7 -9,-2.6 -9,-3.2 -2,-0.5 2,-0.4 -0.909 32.9-110.8-136.7 163.6 6.4 -3.4 4.6 36 36 A C E >> -B 25 0B 2 -2,-0.3 4,-2.9 -11,-0.2 3,-1.7 -0.768 36.1-107.9 -98.7 141.3 7.3 -5.5 7.6 37 37 A N T 34 S+ 0 0 85 -13,-0.7 -1,-0.1 -2,-0.4 -12,-0.1 0.777 123.2 57.4 -31.6 -36.8 4.7 -7.5 9.5 38 38 A G T 34 S+ 0 0 37 1,-0.2 3,-0.3 2,-0.1 -1,-0.3 0.940 117.4 28.7 -64.6 -48.9 5.1 -4.8 12.2 39 39 A C T <4 S+ 0 0 28 -3,-1.7 2,-1.6 1,-0.2 19,-1.3 0.877 116.7 60.8 -79.3 -40.8 4.2 -1.9 9.8 40 40 A L S < S+ 0 0 1 -4,-2.9 -1,-0.2 17,-0.2 17,-0.2 -0.380 70.6 112.4 -85.5 58.8 1.9 -4.0 7.6 41 41 A S + 0 0 65 -2,-1.6 2,-0.3 -3,-0.3 -1,-0.2 -0.095 55.9 87.3-120.1 32.5 -0.5 -4.8 10.4 42 42 A F E -C 56 0C 52 14,-1.2 14,-2.2 -3,-0.1 2,-0.4 -0.919 56.8-152.0-131.5 157.2 -3.5 -2.9 9.2 43 43 A S E +C 55 0C 48 -2,-0.3 2,-0.3 12,-0.3 12,-0.2 -0.993 21.2 156.5-133.5 137.1 -6.4 -3.5 6.9 44 44 A A E -C 54 0C 8 10,-2.1 10,-1.5 -2,-0.4 8,-0.1 -0.988 50.2 -83.7-157.6 148.5 -8.5 -1.1 4.8 45 45 A L E -C 53 0C 85 -2,-0.3 8,-0.3 8,-0.3 5,-0.1 -0.334 45.2-153.3 -56.2 120.2 -10.7 -1.1 1.7 46 46 A V E > > -C 52 0C 0 6,-1.9 5,-2.6 -2,-0.1 6,-1.0 -0.877 14.7-152.4-104.4 123.5 -8.4 -0.9 -1.3 47 47 A P T 3 5S+ 0 0 86 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 0.453 97.5 58.1 -69.8 1.1 -9.8 0.7 -4.6 48 48 A R T 3 5S+ 0 0 183 4,-0.1 -18,-0.1 1,-0.1 -3,-0.0 0.755 102.4 48.6 -99.8 -33.8 -7.2 -1.5 -6.4 49 49 A A T < 5S- 0 0 34 -3,-0.6 -1,-0.1 3,-0.2 -3,-0.1 0.028 135.4 -80.6 -95.2 26.3 -8.3 -4.9 -5.2 50 50 A G T 5S- 0 0 64 1,-0.1 -2,-0.1 -3,-0.1 -5,-0.0 0.738 83.2 -60.8 82.9 23.9 -12.0 -4.1 -6.0 51 51 A N S - 0 0 0 -2,-0.3 4,-3.1 -17,-0.2 5,-0.3 -0.403 43.4-100.5 -76.4 153.6 0.6 -0.4 5.7 58 58 A K H > S+ 0 0 118 -19,-1.3 4,-1.8 2,-0.2 5,-0.2 0.885 121.6 50.1 -34.8 -65.7 -0.1 2.0 8.6 59 59 A Q H >> S+ 0 0 102 1,-0.2 4,-2.9 2,-0.2 3,-2.2 0.922 114.4 41.6 -39.5 -73.9 0.1 5.0 6.3 60 60 A C H 3> S+ 0 0 1 1,-0.3 4,-3.4 2,-0.3 5,-0.4 0.903 109.5 59.5 -41.8 -55.0 -2.4 3.7 3.7 61 61 A H H 3< S+ 0 0 56 -4,-3.1 -1,-0.3 1,-0.2 4,-0.2 0.815 115.5 36.7 -45.6 -33.7 -4.6 2.4 6.4 62 62 A T H