==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 27-MAY-04 1WFW . COMPND 2 MOLECULE: KALIRIN-9A; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 74 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5050.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 52.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 28.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 10.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 134 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-158.0 16.0 5.1 -15.6 2 2 A S - 0 0 112 1,-0.1 3,-0.1 0, 0.0 0, 0.0 -0.242 360.0-140.8 -79.2 171.3 12.3 4.7 -15.8 3 3 A S S S- 0 0 126 1,-0.2 -1,-0.1 -2,-0.0 0, 0.0 -0.218 78.8 -29.4-127.5 42.2 10.0 6.3 -18.5 4 4 A G - 0 0 67 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 0.597 67.2-135.5 109.9 97.8 7.0 7.3 -16.4 5 5 A S - 0 0 103 1,-0.1 3,-0.0 -3,-0.1 0, 0.0 -0.175 6.3-157.8 -73.4 171.0 5.9 5.5 -13.2 6 6 A S + 0 0 120 28,-0.1 -1,-0.1 2,-0.0 28,-0.0 0.710 67.5 67.0-116.8 -47.5 2.3 4.6 -12.4 7 7 A G S S- 0 0 24 1,-0.1 2,-0.5 26,-0.1 28,-0.1 -0.283 79.6-119.1 -76.0 164.3 2.1 4.2 -8.7 8 8 A S - 0 0 82 26,-0.2 26,-2.0 -3,-0.0 2,-0.4 -0.922 20.5-128.3-110.7 124.2 2.5 7.0 -6.2 9 9 A T E -A 33 0A 55 -2,-0.5 59,-1.2 24,-0.2 2,-0.4 -0.540 32.3-177.1 -71.6 123.4 5.4 6.8 -3.6 10 10 A M E -AB 32 67A 36 22,-2.6 22,-2.7 -2,-0.4 2,-0.5 -0.948 19.0-139.3-125.4 144.9 4.1 7.4 -0.1 11 11 A T E -A 31 0A 26 55,-1.5 55,-0.3 -2,-0.4 2,-0.3 -0.891 28.5-111.9-106.8 128.0 5.9 7.6 3.2 12 12 A V - 0 0 2 18,-3.0 17,-2.0 -2,-0.5 53,-0.2 -0.375 31.4-177.8 -58.2 115.3 4.5 6.0 6.4 13 13 A I + 0 0 68 51,-2.1 2,-0.3 -2,-0.3 -1,-0.2 0.734 69.8 27.2 -86.8 -25.7 3.5 8.8 8.7 14 14 A K S S- 0 0 94 50,-0.7 -1,-0.2 13,-0.1 15,-0.1 -0.975 90.9 -96.7-138.0 151.3 2.4 6.4 11.5 15 15 A D - 0 0 69 -2,-0.3 2,-0.3 12,-0.1 12,-0.3 -0.184 43.5-178.0 -62.0 156.9 3.3 2.9 12.6 16 16 A Y B -E 26 0B 27 10,-2.6 10,-1.5 -4,-0.0 2,-0.4 -0.986 17.8-141.2-155.3 159.3 1.2 -0.0 11.5 17 17 A Y - 0 0 157 -2,-0.3 2,-1.0 8,-0.2 8,-0.1 -0.967 26.2-113.8-128.9 144.1 0.9 -3.8 11.8 18 18 A A + 0 0 32 -2,-0.4 7,-0.1 1,-0.2 42,-0.1 -0.643 29.7 179.0 -78.5 103.9 -0.1 -6.5 9.3 19 19 A L + 0 0 132 -2,-1.0 -1,-0.2 5,-0.1 2,-0.2 0.800 69.6 41.8 -73.9 -29.7 -3.4 -7.9 10.5 20 20 A K S S- 0 0 119 39,-0.1 39,-0.0 -3,-0.1 0, 0.0 -0.536 92.0-107.2-110.2 178.1 -3.5 -10.3 7.6 21 21 A E S S+ 0 0 198 1,-0.2 -1,-0.1 -2,-0.2 -3,-0.1 0.869 119.9 48.0 -73.3 -38.1 -1.0 -12.5 5.8 22 22 A N S S+ 0 0 75 36,-0.1 -1,-0.2 2,-0.1 37,-0.2 0.847 98.0 86.4 -70.8 -34.8 -0.8 -10.3 2.8 23 23 A E - 0 0 8 35,-0.3 2,-0.3 1,-0.0 -5,-0.2 -0.312 68.9-149.4 -66.9 150.0 -0.4 -7.2 4.9 24 24 A I - 0 0 20 35,-0.7 2,-0.3 -7,-0.1 -5,-0.1 -0.891 16.8-107.3-123.3 153.8 3.1 -6.2 6.0 25 25 A C + 0 0 80 -2,-0.3 2,-0.3 -7,-0.1 -8,-0.2 -0.574 42.3 172.1 -80.4 139.1 4.4 -4.4 9.1 26 26 A V B -E 16 0B 4 -10,-1.5 -10,-2.6 -2,-0.3 2,-0.3 -0.956 17.9-148.8-144.1 161.4 5.7 -0.8 8.7 27 27 A S > - 0 0 52 -2,-0.3 3,-2.1 -12,-0.3 2,-0.5 -0.895 42.0 -77.1-131.1 160.7 6.8 2.1 10.8 28 28 A Q T 3 S+ 0 0 148 -2,-0.3 -15,-0.2 1,-0.2 -13,-0.1 -0.395 119.3 32.9 -59.3 108.8 6.7 5.9 10.6 29 29 A G T 3 S+ 0 0 47 -17,-2.0 -1,-0.2 -2,-0.5 -16,-0.1 -0.014 83.2 122.5 134.8 -31.2 9.4 6.8 8.1 30 30 A E < - 0 0 30 -3,-2.1 -18,-3.0 -19,-0.1 2,-0.5 -0.250 52.3-139.8 -62.2 149.6 9.3 3.8 5.7 31 31 A V E +A 11 0A 54 -20,-0.2 2,-0.2 -3,-0.1 -20,-0.2 -0.959 27.2 167.4-119.3 120.9 8.7 4.6 2.0 32 32 A V E -A 10 0A 1 -22,-2.7 -22,-2.6 -2,-0.5 2,-0.5 -0.751 30.8-121.0-124.4 172.0 6.5 2.4 -0.1 33 33 A Q E -AC 9 46A 68 13,-1.1 13,-2.8 -24,-0.2 -24,-0.2 -0.965 23.9-131.2-121.1 120.7 4.8 2.5 -3.5 34 34 A V E + C 0 45A 24 -26,-2.0 11,-0.3 -2,-0.5 -26,-0.2 -0.371 27.3 171.3 -67.6 144.0 1.1 2.2 -3.9 35 35 A L E - 0 0 82 9,-2.3 2,-0.3 1,-0.5 10,-0.2 0.646 59.9 -33.1-121.3 -38.0 -0.2 -0.2 -6.5 36 36 A A E - C 0 44A 47 8,-0.6 8,-1.8 -29,-0.0 -1,-0.5 -0.972 56.4-103.1-171.3 177.6 -4.0 -0.3 -6.0 37 37 A V E - C 0 43A 99 -2,-0.3 2,-0.3 6,-0.3 6,-0.2 -0.872 23.7-146.9-119.9 152.9 -6.8 -0.1 -3.4 38 38 A N > - 0 0 57 4,-2.4 3,-1.4 -2,-0.3 4,-0.5 -0.755 30.7-110.9-115.4 163.0 -9.0 -2.8 -1.8 39 39 A Q T 3 S+ 0 0 163 1,-0.3 -1,-0.1 -2,-0.3 -2,-0.0 0.648 115.0 69.4 -64.9 -13.7 -12.6 -2.9 -0.7 40 40 A Q T 3 S- 0 0 100 2,-0.1 -1,-0.3 1,-0.0 3,-0.1 0.122 123.1-103.2 -90.9 20.7 -11.2 -3.1 2.9 41 41 A N S < S+ 0 0 131 -3,-1.4 21,-0.6 1,-0.2 22,-0.3 0.841 80.9 137.3 61.6 33.9 -9.9 0.5 2.6 42 42 A M E - D 0 61A 12 -4,-0.5 -4,-2.4 19,-0.2 2,-0.5 -0.704 48.5-142.5-109.5 162.4 -6.4 -0.9 2.0 43 43 A C E -CD 37 60A 18 17,-2.0 17,-1.3 -6,-0.2 2,-1.0 -0.924 18.2-131.1-130.3 107.5 -3.7 0.2 -0.5 44 44 A L E +CD 36 59A 26 -8,-1.8 -9,-2.3 -2,-0.5 -8,-0.6 -0.366 38.5 179.4 -58.0 95.9 -1.5 -2.5 -2.1 45 45 A V E -CD 34 58A 0 13,-1.7 13,-2.0 -2,-1.0 2,-0.7 -0.841 26.1-132.2-106.2 140.3 1.9 -0.9 -1.4 46 46 A Y E -CD 33 57A 95 -13,-2.8 -13,-1.1 -2,-0.4 11,-0.2 -0.808 17.7-158.0 -94.3 114.4 5.2 -2.5 -2.5 47 47 A Q E - D 0 56A 1 9,-2.2 9,-3.2 -2,-0.7 3,-0.1 -0.820 13.0-140.4 -96.6 114.9 7.8 -2.5 0.3 48 48 A P - 0 0 57 0, 0.0 5,-0.2 0, 0.0 -17,-0.1 -0.279 45.6 -61.8 -69.8 156.3 11.4 -2.7 -0.9 49 49 A A S S+ 0 0 72 3,-0.1 2,-0.3 1,-0.1 3,-0.1 -0.038 70.9 168.3 -38.7 129.9 14.0 -4.8 0.9 50 50 A S - 0 0 41 3,-2.5 -1,-0.1 -3,-0.1 -3,-0.0 -0.949 51.1 -99.0-146.1 164.5 14.5 -3.5 4.4 51 51 A D S S+ 0 0 166 -2,-0.3 -1,-0.1 1,-0.2 -2,-0.0 0.912 124.2 47.8 -49.7 -48.7 16.1 -4.3 7.7 52 52 A H S S- 0 0 144 1,-0.2 -1,-0.2 -3,-0.1 -3,-0.1 0.941 134.1 -14.7 -59.2 -50.1 12.8 -5.5 9.1 53 53 A S S S- 0 0 38 -5,-0.2 -3,-2.5 -28,-0.1 -1,-0.2 -0.993 71.2-107.2-156.7 150.8 12.0 -7.6 5.9 54 54 A P S S- 0 0 94 0, 0.0 -7,-0.1 0, 0.0 -3,-0.0 -0.043 70.6 -42.2 -69.7 177.0 13.2 -8.0 2.3 55 55 A A S S+ 0 0 51 -9,-0.1 2,-0.3 2,-0.0 -9,-0.0 -0.146 80.1 149.0 -44.3 123.0 11.4 -6.9 -0.8 56 56 A A E -D 47 0A 37 -9,-3.2 -9,-2.2 -3,-0.2 2,-0.6 -0.970 44.8-125.3-161.7 145.6 7.7 -7.8 -0.3 57 57 A E E +D 46 0A 90 -2,-0.3 2,-0.3 -11,-0.2 -11,-0.2 -0.847 37.8 165.3 -99.2 120.3 4.3 -6.5 -1.3 58 58 A G E -D 45 0A 0 -13,-2.0 -13,-1.7 -2,-0.6 2,-0.3 -0.962 35.1-114.4-135.3 152.8 1.9 -5.8 1.5 59 59 A W E -D 44 0A 48 -2,-0.3 -35,-0.7 -15,-0.2 -15,-0.2 -0.644 34.6-179.3 -86.6 139.9 -1.4 -3.9 2.0 60 60 A V E -D 43 0A 1 -17,-1.3 -17,-2.0 -2,-0.3 2,-0.5 -0.987 35.1 -99.1-140.4 149.3 -1.5 -0.9 4.2 61 61 A P E > -D 42 0A 25 0, 0.0 3,-3.0 0, 0.0 4,-0.2 -0.532 24.8-141.1 -69.8 113.9 -4.2 1.6 5.4 62 62 A G G > S+ 0 0 28 -21,-0.6 3,-1.7 -2,-0.5 -20,-0.1 0.698 97.0 78.4 -47.4 -18.8 -4.0 4.8 3.2 63 63 A S G 3 S+ 0 0 89 -22,-0.3 -1,-0.3 1,-0.3 -21,-0.0 0.855 95.8 43.5 -60.4 -35.8 -4.7 6.5 6.5 64 64 A I G < S+ 0 0 12 -3,-3.0 -51,-2.1 -51,-0.1 -50,-0.7 0.238 103.1 92.7 -93.4 12.6 -1.1 6.0 7.5 65 65 A L < - 0 0 12 -3,-1.7 -53,-0.1 -4,-0.2 -55,-0.0 -0.805 51.9-177.7-108.6 149.8 0.1 7.0 4.1 66 66 A A - 0 0 25 -55,-0.3 -55,-1.5 -2,-0.3 2,-1.0 -0.990 38.3 -94.7-145.8 152.2 1.1 10.5 2.8 67 67 A P B -B 10 0A 115 0, 0.0 -57,-0.2 0, 0.0 -58,-0.0 -0.528 46.4-147.2 -69.7 99.7 2.3 12.1 -0.4 68 68 A F - 0 0 106 -59,-1.2 2,-0.3 -2,-1.0 -59,-0.1 -0.128 19.5-176.4 -63.0 163.7 6.0 12.1 -0.2 69 69 A S + 0 0 83 -59,-0.0 3,-0.1 0, 0.0 -1,-0.0 -0.987 35.8 71.0-160.8 155.9 8.1 14.9 -1.8 70 70 A G S > S+ 0 0 53 -2,-0.3 3,-0.9 1,-0.2 2,-0.1 -0.771 75.0 63.2 141.7 -94.9 11.7 15.9 -2.4 71 71 A P T 3 S- 0 0 96 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 -0.411 121.6 -9.2 -69.8 141.1 13.8 14.0 -5.0 72 72 A S T 3 S+ 0 0 131 1,-0.1 0, 0.0 -2,-0.1 0, 0.0 0.862 84.5 155.1 35.4 52.7 12.7 14.1 -8.6 73 73 A S < 0 0 91 -3,-0.9 -1,-0.1 -4,-0.0 -5,-0.0 0.912 360.0 360.0 -72.8 -44.4 9.5 15.8 -7.4 74 74 A G 0 0 120 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.471 360.0 360.0-120.6 360.0 8.8 17.5 -10.8