==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 28-MAY-04 1WGF . COMPND 2 MOLECULE: UPSTREAM BINDING FACTOR 1; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR K.SAITO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 90 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8508.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 45 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 34 37.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 115 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-168.3 -20.1 14.3 7.0 2 2 A S + 0 0 139 2,-0.1 2,-0.2 1,-0.0 0, 0.0 0.817 360.0 70.3 60.1 31.0 -18.3 14.9 3.7 3 3 A S + 0 0 121 1,-0.1 2,-0.0 2,-0.0 -1,-0.0 -0.723 57.2 86.8-177.3 123.1 -18.1 18.6 4.6 4 4 A G - 0 0 68 -2,-0.2 2,-0.4 -3,-0.0 -1,-0.1 0.000 58.8-120.9 141.9 109.9 -16.1 20.5 7.1 5 5 A S + 0 0 125 -2,-0.0 2,-0.3 2,-0.0 -2,-0.0 -0.550 40.8 159.7 -72.8 125.6 -12.6 22.1 7.0 6 6 A S - 0 0 115 -2,-0.4 2,-0.5 0, 0.0 -1,-0.0 -0.789 21.9-160.8-152.2 102.9 -10.4 20.7 9.8 7 7 A G - 0 0 72 -2,-0.3 -2,-0.0 1,-0.2 0, 0.0 -0.747 9.4-179.3 -90.0 125.4 -6.6 20.9 9.7 8 8 A K S S+ 0 0 194 -2,-0.5 -1,-0.2 1,-0.1 0, 0.0 0.921 80.8 49.5 -85.4 -51.9 -4.7 18.5 11.9 9 9 A P S S- 0 0 114 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.931 87.7-175.4 -52.8 -51.9 -1.1 19.5 11.1 10 10 A S + 0 0 81 2,-0.1 -2,-0.1 0, 0.0 3,-0.0 0.473 41.9 35.5 62.4 147.0 -1.7 23.2 11.6 11 11 A Q S S+ 0 0 178 2,-0.0 0, 0.0 0, 0.0 0, 0.0 0.309 91.5 53.6 59.9 161.9 0.9 25.9 10.9 12 12 A E - 0 0 200 1,-0.1 2,-0.3 -3,-0.0 -2,-0.1 0.332 69.0-134.0 60.3 159.8 3.4 25.6 8.1 13 13 A G - 0 0 51 -3,-0.0 2,-2.2 0, 0.0 3,-0.2 -0.926 13.2-124.0-154.8 126.1 2.5 25.0 4.5 14 14 A G + 0 0 66 -2,-0.3 -2,-0.0 1,-0.2 6,-0.0 -0.446 42.8 160.8 -69.8 81.3 3.8 22.7 1.8 15 15 A K S S- 0 0 212 -2,-2.2 -1,-0.2 1,-0.1 -3,-0.0 0.968 82.0 -21.4 -66.7 -55.0 4.5 25.3 -0.8 16 16 A G S S+ 0 0 77 -3,-0.2 -1,-0.1 2,-0.0 -2,-0.1 0.056 100.7 129.0-147.1 28.9 6.9 23.2 -2.9 17 17 A G - 0 0 57 -4,-0.1 2,-0.4 1,-0.1 3,-0.1 0.049 53.1-111.3 -74.9-170.4 8.1 20.5 -0.6 18 18 A S - 0 0 69 1,-0.1 -1,-0.1 65,-0.0 -2,-0.0 -0.979 67.8 -5.6-130.7 141.9 8.2 16.7 -1.3 19 19 A E - 0 0 99 -2,-0.4 -1,-0.1 1,-0.1 62,-0.1 0.301 68.0-127.7 60.4 162.1 6.2 13.9 0.3 20 20 A K - 0 0 123 60,-0.4 -1,-0.1 -3,-0.1 62,-0.1 -0.972 32.5 -73.1-143.9 157.0 3.8 14.3 3.2 21 21 A P + 0 0 130 0, 0.0 2,-0.3 0, 0.0 60,-0.1 -0.251 65.9 150.1 -52.4 124.9 3.2 12.8 6.7 22 22 A K - 0 0 103 59,-0.1 0, 0.0 58,-0.0 0, 0.0 -0.931 52.3 -72.0-150.6 171.9 1.6 9.4 6.3 23 23 A R - 0 0 197 -2,-0.3 58,-0.1 1,-0.1 0, 0.0 -0.569 56.1-117.5 -73.4 123.4 1.4 6.0 8.0 24 24 A P - 0 0 76 0, 0.0 2,-0.3 0, 0.0 54,-0.1 0.010 15.8-139.6 -53.9 165.6 4.7 4.0 7.7 25 25 A V - 0 0 27 49,-0.2 53,-0.2 4,-0.0 52,-0.2 -0.690 24.8-179.9-134.8 81.6 4.8 0.7 5.8 26 26 A S > - 0 0 70 -2,-0.3 4,-1.8 51,-0.1 3,-0.2 -0.072 47.4 -92.9 -71.5 177.4 7.0 -1.9 7.5 27 27 A A H > S+ 0 0 8 1,-0.2 4,-1.9 2,-0.2 5,-0.2 0.890 128.7 50.9 -59.7 -40.9 7.7 -5.4 6.2 28 28 A M H > S+ 0 0 83 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.819 106.0 57.0 -66.8 -31.1 4.8 -6.7 8.3 29 29 A F H > S+ 0 0 68 2,-0.2 4,-1.4 3,-0.2 5,-0.2 0.920 106.8 47.3 -66.2 -45.2 2.5 -4.0 6.9 30 30 A I H X S+ 0 0 19 -4,-1.8 4,-3.1 2,-0.2 3,-0.4 0.951 117.1 41.5 -61.6 -51.7 3.1 -5.1 3.3 31 31 A F H X S+ 0 0 6 -4,-1.9 4,-1.3 1,-0.2 -1,-0.2 0.800 116.1 51.6 -66.5 -29.2 2.6 -8.8 4.0 32 32 A S H < S+ 0 0 34 -4,-1.8 4,-0.3 -5,-0.2 -1,-0.2 0.693 118.0 37.5 -80.2 -20.3 -0.4 -7.9 6.2 33 33 A E H X S+ 0 0 104 -4,-1.4 4,-1.0 -3,-0.4 -2,-0.2 0.745 119.5 45.4 -99.5 -32.0 -1.9 -5.7 3.4 34 34 A E H < S+ 0 0 103 -4,-3.1 4,-0.4 -5,-0.2 -3,-0.2 0.774 119.2 41.9 -81.8 -28.5 -1.0 -7.9 0.4 35 35 A K T X S+ 0 0 39 -4,-1.3 4,-2.6 -5,-0.3 5,-0.2 0.761 105.1 65.2 -88.0 -28.8 -2.1 -11.1 2.2 36 36 A R H > S+ 0 0 90 -4,-0.3 4,-2.6 1,-0.2 5,-0.2 0.952 101.9 47.4 -58.2 -53.0 -5.3 -9.6 3.7 37 37 A R H X S+ 0 0 190 -4,-1.0 4,-1.2 1,-0.2 -1,-0.2 0.805 114.3 49.8 -59.3 -29.7 -6.9 -9.0 0.3 38 38 A Q H > S+ 0 0 102 -4,-0.4 4,-2.0 2,-0.2 -1,-0.2 0.871 112.6 44.7 -76.9 -38.9 -6.0 -12.5 -0.7 39 39 A L H X S+ 0 0 15 -4,-2.6 4,-2.7 2,-0.2 7,-0.2 0.802 107.2 60.9 -74.5 -30.2 -7.4 -14.1 2.5 40 40 A Q H < S+ 0 0 55 -4,-2.6 -1,-0.2 -5,-0.2 -2,-0.2 0.919 111.8 37.2 -62.8 -45.2 -10.5 -12.0 2.2 41 41 A E H < S+ 0 0 169 -4,-1.2 -2,-0.2 -5,-0.2 -1,-0.2 0.920 121.5 44.4 -73.3 -46.0 -11.5 -13.5 -1.1 42 42 A E H < S+ 0 0 100 -4,-2.0 -2,-0.2 1,-0.3 -3,-0.2 0.831 127.6 31.8 -67.6 -32.6 -10.3 -17.0 -0.3 43 43 A R >< + 0 0 139 -4,-2.7 3,-0.9 -5,-0.2 -1,-0.3 -0.715 63.2 167.1-129.2 81.8 -11.9 -16.8 3.1 44 44 A P T 3 S+ 0 0 112 0, 0.0 -1,-0.1 0, 0.0 -4,-0.1 0.705 77.9 64.8 -66.1 -19.7 -15.1 -14.6 3.0 45 45 A E T 3 S+ 0 0 179 -3,-0.1 2,-0.4 2,-0.1 -5,-0.1 0.812 88.8 79.4 -73.0 -30.7 -16.1 -15.9 6.4 46 46 A L S < S- 0 0 52 -3,-0.9 2,-0.1 -7,-0.2 -3,-0.1 -0.645 74.0-147.6 -82.7 132.0 -13.0 -14.2 8.0 47 47 A S > - 0 0 66 -2,-0.4 4,-2.9 1,-0.1 3,-0.3 -0.420 28.0-103.3 -92.9 171.0 -13.3 -10.5 8.6 48 48 A E H > S+ 0 0 126 1,-0.2 4,-1.6 2,-0.2 -1,-0.1 0.905 122.8 53.7 -59.4 -43.5 -10.6 -7.8 8.5 49 49 A S H 4 S+ 0 0 92 1,-0.2 4,-0.4 2,-0.2 -1,-0.2 0.830 114.7 41.9 -61.0 -32.3 -10.4 -7.7 12.3 50 50 A E H >> S+ 0 0 118 -3,-0.3 4,-1.3 2,-0.2 3,-1.1 0.839 106.6 60.7 -82.9 -36.5 -9.9 -11.5 12.3 51 51 A L H 3X S+ 0 0 0 -4,-2.9 4,-3.1 1,-0.3 5,-0.2 0.813 93.3 67.7 -60.3 -30.5 -7.5 -11.4 9.4 52 52 A T H 3X S+ 0 0 70 -4,-1.6 4,-1.3 1,-0.2 -1,-0.3 0.849 102.6 45.2 -58.5 -35.3 -5.2 -9.2 11.5 53 53 A R H <> S+ 0 0 199 -3,-1.1 4,-1.2 -4,-0.4 -1,-0.2 0.826 114.9 47.2 -77.7 -33.4 -4.6 -12.2 13.8 54 54 A L H X S+ 0 0 58 -4,-1.3 4,-1.9 2,-0.2 -2,-0.2 0.827 108.3 55.9 -76.5 -33.1 -4.1 -14.6 10.9 55 55 A L H X S+ 0 0 5 -4,-3.1 4,-2.1 2,-0.2 -2,-0.2 0.908 105.7 50.8 -65.4 -43.1 -1.7 -12.2 9.1 56 56 A A H X S+ 0 0 33 -4,-1.3 4,-1.2 -5,-0.2 -1,-0.2 0.884 111.1 48.7 -62.2 -39.8 0.6 -12.0 12.1 57 57 A R H X S+ 0 0 163 -4,-1.2 4,-1.3 1,-0.2 -1,-0.2 0.861 110.6 50.9 -68.6 -36.5 0.7 -15.8 12.3 58 58 A M H X S+ 0 0 51 -4,-1.9 4,-1.4 1,-0.2 -2,-0.2 0.861 103.5 59.0 -69.1 -36.3 1.5 -16.1 8.6 59 59 A W H < S+ 0 0 26 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.872 106.2 48.3 -60.4 -38.0 4.3 -13.6 8.9 60 60 A N H < S+ 0 0 111 -4,-1.2 -1,-0.2 1,-0.2 -2,-0.2 0.838 106.3 56.9 -71.5 -33.8 6.1 -15.8 11.4 61 61 A D H < S+ 0 0 114 -4,-1.3 -1,-0.2 -5,-0.1 -2,-0.2 0.785 90.3 97.5 -67.7 -27.4 5.6 -18.9 9.2 62 62 A L S < S- 0 0 24 -4,-1.4 2,-0.2 -3,-0.1 -3,-0.0 -0.027 72.5-125.2 -56.7 165.9 7.4 -17.1 6.4 63 63 A S > - 0 0 52 1,-0.1 4,-3.7 0, 0.0 5,-0.3 -0.636 24.9-100.9-112.0 171.2 11.1 -17.8 5.8 64 64 A E H > S+ 0 0 156 1,-0.2 4,-1.4 -2,-0.2 5,-0.1 0.812 124.4 52.4 -59.9 -30.5 14.2 -15.5 5.6 65 65 A K H 4 S+ 0 0 151 2,-0.2 4,-0.5 1,-0.1 -1,-0.2 0.875 116.3 37.6 -73.4 -38.9 14.0 -15.8 1.8 66 66 A K H >> S+ 0 0 117 2,-0.2 4,-0.9 1,-0.2 3,-0.8 0.878 113.7 55.2 -79.4 -40.8 10.3 -14.8 1.7 67 67 A K H >X S+ 0 0 48 -4,-3.7 4,-3.3 1,-0.3 3,-0.6 0.877 100.8 60.1 -59.8 -38.9 10.6 -12.2 4.5 68 68 A A H 3X S+ 0 0 50 -4,-1.4 4,-2.2 -5,-0.3 -1,-0.3 0.800 94.4 66.3 -59.7 -29.2 13.4 -10.5 2.6 69 69 A K H <> S+ 0 0 134 -3,-0.8 4,-0.6 -4,-0.5 -1,-0.2 0.918 115.8 25.2 -58.9 -46.0 10.9 -9.9 -0.3 70 70 A Y H X S+ 0 0 140 -4,-0.6 4,-2.7 -5,-0.2 3,-1.0 0.782 96.5 70.2 -73.7 -27.8 10.6 -3.1 -0.1 74 74 A E H 3X S+ 0 0 45 -4,-1.5 4,-3.5 1,-0.3 5,-0.3 0.874 90.7 60.0 -56.8 -39.3 10.3 -1.5 3.4 75 75 A A H 3< S+ 0 0 72 -4,-0.7 4,-0.3 -3,-0.3 -1,-0.3 0.810 113.9 37.0 -59.4 -30.4 13.5 0.4 2.8 76 76 A A H <4 S+ 0 0 72 -3,-1.0 4,-0.5 -4,-0.4 -2,-0.2 0.788 118.3 48.8 -91.0 -33.4 11.8 2.0 -0.2 77 77 A L H >X S+ 0 0 45 -4,-2.7 4,-1.1 1,-0.2 3,-1.1 0.859 103.5 60.5 -74.3 -36.9 8.4 2.3 1.3 78 78 A K T 3< S+ 0 0 89 -4,-3.5 -1,-0.2 1,-0.3 -2,-0.1 0.816 95.1 64.5 -60.0 -31.0 9.7 3.9 4.6 79 79 A A T >4 S+ 0 0 51 -4,-0.3 3,-1.0 -5,-0.3 -1,-0.3 0.830 97.8 55.4 -62.0 -32.5 11.1 6.7 2.5 80 80 A Q T <4 S+ 0 0 102 -3,-1.1 -60,-0.4 -4,-0.5 -1,-0.2 0.912 116.3 34.8 -67.2 -43.7 7.5 7.7 1.6 81 81 A S T 3< S+ 0 0 15 -4,-1.1 -1,-0.3 1,-0.1 2,-0.2 -0.133 124.0 47.5-102.7 36.0 6.5 8.0 5.2 82 82 A E < - 0 0 91 -3,-1.0 2,-0.4 -5,-0.1 -1,-0.1 -0.727 56.2-177.4-176.2 122.0 9.8 9.3 6.4 83 83 A R - 0 0 167 1,-0.4 -4,-0.1 -2,-0.2 -3,-0.0 -0.946 61.7 -27.9-131.6 112.4 12.2 12.0 5.1 84 84 A K - 0 0 195 -2,-0.4 -1,-0.4 1,-0.1 0, 0.0 0.440 46.7-157.4 62.3 149.8 15.5 12.7 6.8 85 85 A S + 0 0 112 -3,-0.1 -1,-0.1 2,-0.0 3,-0.1 -0.004 47.6 119.0-150.1 31.7 16.2 12.0 10.5 86 86 A G S S- 0 0 44 1,-0.1 2,-1.3 0, 0.0 0, 0.0 -0.047 81.1 -48.2 -88.0-166.1 19.1 14.2 11.4 87 87 A P S S+ 0 0 146 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.508 86.3 132.7 -70.0 92.7 19.4 17.1 13.9 88 88 A S - 0 0 104 -2,-1.3 2,-1.2 2,-0.1 0, 0.0 -0.988 62.7-111.2-143.8 151.6 16.3 19.1 13.1 89 89 A S 0 0 130 -2,-0.3 0, 0.0 1,-0.1 0, 0.0 -0.695 360.0 360.0 -86.0 96.1 13.4 20.7 15.1 90 90 A G 0 0 143 -2,-1.2 -2,-0.1 0, 0.0 -1,-0.1 -0.850 360.0 360.0 120.2 360.0 10.4 18.7 14.1