==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 28-MAY-04 1WGG . COMPND 2 MOLECULE: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 14; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR C.ZHAO,T.TOMIZAWA,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA, . 96 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7296.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 51.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 13.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 14 14.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 9.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 133 0, 0.0 2,-0.3 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 152.4 6.7 4.8 -16.7 2 2 A S + 0 0 122 1,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.972 360.0 23.1-148.2 158.7 4.8 6.5 -19.5 3 3 A S S S+ 0 0 122 -2,-0.3 -1,-0.1 1,-0.1 2,-0.1 0.389 70.2 100.1 62.9 153.7 1.7 6.0 -21.6 4 4 A G - 0 0 61 1,-0.1 2,-0.4 -3,-0.1 -1,-0.1 -0.154 56.1-125.9 114.2 151.4 -1.1 3.7 -20.6 5 5 A S + 0 0 120 -2,-0.1 -1,-0.1 1,-0.1 20,-0.0 -0.827 63.7 101.3-136.6 95.3 -4.6 4.2 -19.1 6 6 A S + 0 0 52 -2,-0.4 20,-1.4 18,-0.0 21,-1.0 -0.342 33.1 142.6-175.5 82.4 -5.3 2.3 -16.0 7 7 A G E -A 25 0A 62 18,-0.2 18,-0.3 19,-0.1 2,-0.2 -0.988 21.0-173.8-135.3 124.6 -5.2 4.0 -12.6 8 8 A Y E -A 24 0A 71 16,-2.0 16,-2.4 -2,-0.4 2,-0.5 -0.688 18.2-133.1-112.5 166.3 -7.5 3.4 -9.7 9 9 A S E +A 23 0A 67 -2,-0.2 61,-2.6 14,-0.2 2,-0.3 -0.977 31.0 163.4-125.5 119.0 -7.8 5.1 -6.3 10 10 A V E -A 22 0A 2 12,-0.7 12,-1.7 -2,-0.5 11,-0.7 -0.770 36.2-111.4-126.5 171.4 -8.1 3.1 -3.1 11 11 A T E -Ab 20 72A 23 60,-1.2 62,-4.8 -2,-0.3 2,-0.5 -0.935 23.4-147.6-111.5 121.6 -7.7 3.8 0.6 12 12 A V E -Ab 19 73A 0 7,-1.7 7,-2.3 -2,-0.5 2,-0.6 -0.751 9.8-161.0 -89.6 128.1 -4.8 2.3 2.5 13 13 A K E +Ab 18 74A 78 60,-3.2 62,-2.4 -2,-0.5 2,-0.5 -0.943 14.2 172.8-114.1 114.3 -5.5 1.4 6.1 14 14 A W E > -A 17 0A 56 3,-1.5 3,-1.5 -2,-0.6 62,-0.1 -0.870 51.8 -91.8-123.7 94.9 -2.4 1.0 8.3 15 15 A G T 3 S- 0 0 56 -2,-0.5 -1,-0.3 60,-0.5 60,-0.0 -0.012 109.1 -5.2 37.1-130.3 -3.5 0.5 11.9 16 16 A K T 3 S+ 0 0 214 -3,-0.1 -1,-0.3 2,-0.0 2,-0.1 0.845 126.8 85.1 -56.5 -35.1 -3.6 3.9 13.6 17 17 A E E < -A 14 0A 99 -3,-1.5 -3,-1.5 -4,-0.1 2,-0.4 -0.385 64.2-168.4 -69.9 146.5 -2.2 5.3 10.4 18 18 A K E -A 13 0A 108 -5,-0.2 2,-0.4 -2,-0.1 -5,-0.2 -0.999 10.7-171.8-140.5 140.3 -4.7 6.2 7.6 19 19 A F E -A 12 0A 33 -7,-2.3 -7,-1.7 -2,-0.4 2,-0.5 -0.943 4.6-180.0-138.1 113.5 -4.2 7.1 4.0 20 20 A E E +A 11 0A 154 -2,-0.4 -9,-0.2 -9,-0.2 52,-0.0 -0.962 66.2 31.0-117.6 123.0 -7.0 8.3 1.7 21 21 A G E S+ 0 0 66 -11,-0.7 2,-0.3 -2,-0.5 -1,-0.2 0.832 73.6 171.0 100.7 49.5 -6.3 9.1 -1.9 22 22 A V E -A 10 0A 7 -12,-1.7 2,-0.8 -3,-0.3 -12,-0.7 -0.631 35.7-118.8 -91.3 149.8 -3.5 6.8 -2.9 23 23 A E E +A 9 0A 159 -2,-0.3 2,-0.4 -14,-0.2 -14,-0.2 -0.802 39.9 173.1 -92.9 109.3 -2.4 6.3 -6.4 24 24 A L E -A 8 0A 5 -16,-2.4 -16,-2.0 -2,-0.8 2,-0.3 -0.897 12.2-164.0-117.8 146.8 -2.9 2.7 -7.5 25 25 A N E -A 7 0A 31 -2,-0.4 8,-0.3 -18,-0.3 -18,-0.2 -0.963 17.2-174.4-130.9 147.1 -2.4 1.3 -11.0 26 26 A T S S+ 0 0 33 -20,-1.4 36,-0.3 -2,-0.3 38,-0.1 0.687 81.4 72.3-107.6 -31.2 -3.6 -2.0 -12.5 27 27 A D S S+ 0 0 90 -21,-1.0 -20,-0.1 35,-0.1 -1,-0.1 0.769 104.4 50.9 -55.7 -25.7 -1.9 -1.8 -15.9 28 28 A E S S- 0 0 76 -22,-0.3 34,-0.3 1,-0.2 5,-0.0 -0.422 104.0 -76.1-104.5-178.8 1.3 -2.5 -13.8 29 29 A P >> - 0 0 47 0, 0.0 3,-1.0 0, 0.0 4,-0.7 -0.253 36.8-114.7 -75.0 165.7 2.2 -5.1 -11.2 30 30 A P H 3> S+ 0 0 0 0, 0.0 4,-1.3 0, 0.0 5,-0.1 0.600 108.8 77.5 -75.0 -12.1 1.0 -5.1 -7.6 31 31 A M H 3> S+ 0 0 96 28,-0.6 4,-1.1 2,-0.2 29,-0.1 0.784 89.6 56.0 -66.6 -28.3 4.6 -4.6 -6.6 32 32 A V H X> S+ 0 0 59 -3,-1.0 4,-1.6 2,-0.2 3,-1.1 0.981 103.8 49.6 -66.9 -59.3 4.2 -0.9 -7.5 33 33 A F H 3X S+ 0 0 1 -4,-0.7 4,-1.7 1,-0.3 -1,-0.2 0.806 115.6 46.3 -49.1 -33.0 1.2 -0.2 -5.3 34 34 A K H 3X S+ 0 0 17 -4,-1.3 4,-1.0 2,-0.2 -1,-0.3 0.738 103.8 62.3 -81.4 -25.4 3.2 -1.9 -2.6 35 35 A A H << S+ 0 0 54 -4,-1.1 4,-0.3 -3,-1.1 -2,-0.2 0.782 108.7 43.2 -69.1 -27.6 6.3 0.1 -3.6 36 36 A Q H >X S+ 0 0 74 -4,-1.6 3,-3.2 2,-0.2 4,-1.0 0.915 102.3 62.6 -82.2 -49.3 4.3 3.3 -2.7 37 37 A L H 3X>S+ 0 0 0 -4,-1.7 4,-4.5 1,-0.3 5,-0.9 0.786 95.2 67.3 -46.0 -29.3 2.8 2.0 0.5 38 38 A F H 3<5S+ 0 0 91 -4,-1.0 -1,-0.3 1,-0.3 -2,-0.2 0.838 105.0 39.3 -61.3 -34.7 6.4 1.8 1.6 39 39 A A H <45S+ 0 0 91 -3,-3.2 -1,-0.3 -4,-0.3 -2,-0.2 0.483 119.7 49.3 -91.8 -6.1 6.6 5.6 1.4 40 40 A L H <5S+ 0 0 49 -4,-1.0 -2,-0.2 -3,-0.5 -3,-0.2 0.810 134.6 6.6 -97.6 -42.3 3.1 5.8 2.9 41 41 A T T <5S- 0 0 19 -4,-4.5 -3,-0.2 2,-0.2 -2,-0.1 0.816 93.0-121.0-105.1 -56.5 3.6 3.5 5.8 42 42 A G < + 0 0 25 -5,-0.9 2,-0.3 1,-0.4 -4,-0.2 0.368 69.5 121.3 123.8 3.8 7.3 2.6 5.9 43 43 A V - 0 0 0 -6,-0.4 -1,-0.4 1,-0.1 -2,-0.2 -0.717 69.8 -95.9 -98.5 148.8 7.0 -1.1 5.5 44 44 A Q > - 0 0 75 -2,-0.3 4,-1.5 34,-0.2 -1,-0.1 -0.131 29.5-117.0 -57.8 157.0 8.5 -3.1 2.7 45 45 A P T 4 S+ 0 0 46 0, 0.0 5,-0.2 0, 0.0 -1,-0.1 0.474 115.9 46.9 -75.0 -2.0 6.4 -4.0 -0.3 46 46 A A T 4 S+ 0 0 70 -12,-0.1 4,-0.1 3,-0.1 -11,-0.0 0.833 113.0 41.6-101.6 -54.8 6.9 -7.6 0.6 47 47 A R T 4 S+ 0 0 171 1,-0.1 2,-1.3 2,-0.1 29,-0.1 0.723 92.9 99.9 -66.2 -21.8 6.2 -7.6 4.3 48 48 A Q S < S- 0 0 0 -4,-1.5 2,-1.5 1,-0.1 29,-0.2 -0.547 70.1-151.6 -70.9 95.7 3.3 -5.3 3.6 49 49 A K - 0 0 119 27,-2.3 2,-1.0 -2,-1.3 27,-0.5 -0.566 10.8-162.4 -73.1 92.9 0.4 -7.8 3.6 50 50 A V - 0 0 0 -2,-1.5 7,-2.7 7,-0.2 25,-0.2 -0.703 10.4-158.9 -82.7 103.8 -1.9 -6.0 1.2 51 51 A M E -C 56 0B 67 23,-3.3 2,-0.3 -2,-1.0 5,-0.2 -0.212 1.0-142.6 -76.6 170.7 -5.3 -7.5 1.8 52 52 A V E > -C 55 0B 38 3,-2.3 3,-1.1 21,-0.1 21,-0.1 -0.941 35.7 -93.5-135.7 156.2 -8.2 -7.5 -0.6 53 53 A K T 3 S- 0 0 151 -2,-0.3 -1,-0.0 1,-0.3 3,-0.0 0.806 124.7 -10.8 -33.2 -40.8 -12.0 -7.2 -0.3 54 54 A G T 3 S+ 0 0 81 -3,-0.0 -1,-0.3 2,-0.0 2,-0.3 -0.100 135.9 29.8-158.1 44.0 -11.8 -11.0 -0.2 55 55 A G E < S-C 52 0B 27 -3,-1.1 -3,-2.3 2,-0.0 2,-0.4 -0.948 79.5 -82.7-176.1-169.2 -8.3 -12.0 -1.1 56 56 A T E -C 51 0B 80 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.924 39.2-108.1-122.7 147.1 -4.6 -11.0 -1.1 57 57 A L - 0 0 13 -7,-2.7 -7,-0.2 -2,-0.4 5,-0.1 -0.545 35.7-138.0 -74.0 132.6 -2.6 -8.8 -3.4 58 58 A K - 0 0 119 -2,-0.3 4,-0.1 1,-0.1 -8,-0.1 -0.000 6.3-150.0 -76.7-172.1 -0.3 -10.8 -5.7 59 59 A D S S+ 0 0 79 2,-0.2 -28,-0.6 -29,-0.1 3,-0.1 0.588 89.5 48.6-128.2 -45.9 3.3 -9.8 -6.5 60 60 A D S S- 0 0 119 1,-0.3 2,-0.3 -30,-0.1 -29,-0.1 0.973 128.8 -29.8 -63.3 -57.0 4.0 -11.1 -10.0 61 61 A D - 0 0 106 1,-0.2 -1,-0.3 -32,-0.1 -2,-0.2 -0.978 49.4-119.0-159.4 160.1 0.8 -9.8 -11.5 62 62 A W - 0 0 13 -2,-0.3 -1,-0.2 -34,-0.3 -4,-0.1 0.984 41.5-140.8 -66.5 -59.6 -2.8 -8.9 -10.5 63 63 A G - 0 0 59 2,-0.1 3,-0.1 -3,-0.1 -2,-0.0 0.880 63.6 -51.1 95.4 54.6 -4.4 -11.3 -12.9 64 64 A N S S- 0 0 167 1,-0.2 2,-0.1 -38,-0.1 -1,-0.0 0.904 86.1-174.1 49.5 47.0 -7.4 -9.4 -14.3 65 65 A I - 0 0 57 1,-0.1 2,-1.5 -39,-0.1 -1,-0.2 -0.431 32.7-110.7 -73.1 147.0 -8.3 -8.7 -10.7 66 66 A K + 0 0 189 -2,-0.1 2,-0.2 -3,-0.1 -1,-0.1 -0.646 52.1 172.0 -81.9 90.1 -11.6 -6.9 -10.1 67 67 A M - 0 0 17 -2,-1.5 2,-0.3 4,-0.0 -41,-0.0 -0.594 11.1-177.3 -98.9 161.6 -10.4 -3.5 -8.9 68 68 A K - 0 0 98 -2,-0.2 2,-0.6 -59,-0.0 3,-0.5 -0.985 29.9-111.6-156.2 152.3 -12.4 -0.4 -8.2 69 69 A N S S+ 0 0 111 -2,-0.3 -59,-0.2 1,-0.2 3,-0.1 -0.800 101.0 32.2 -92.2 119.2 -11.7 3.2 -7.1 70 70 A G S S+ 0 0 58 -61,-2.6 -1,-0.2 -2,-0.6 -60,-0.1 -0.058 87.0 119.2 128.6 -29.9 -13.0 4.0 -3.7 71 71 A M - 0 0 18 -3,-0.5 -60,-1.2 -62,-0.2 2,-0.4 0.253 63.4-108.4 -52.0-173.4 -12.6 0.6 -2.1 72 72 A T E -b 11 0A 67 -62,-0.2 2,-0.5 -3,-0.1 -60,-0.2 -0.986 18.4-152.7-130.0 138.5 -10.3 0.1 0.9 73 73 A V E -b 12 0A 4 -62,-4.8 -60,-3.2 -2,-0.4 2,-0.4 -0.948 10.2-152.4-113.8 123.4 -7.0 -1.6 1.2 74 74 A L E -b 13 0A 56 -2,-0.5 -23,-3.3 -62,-0.2 2,-0.3 -0.804 12.6-165.8 -96.8 132.5 -5.9 -3.2 4.5 75 75 A M - 0 0 0 -62,-2.4 -60,-0.5 -2,-0.4 2,-0.4 -0.905 7.6-171.6-119.9 147.4 -2.2 -3.5 5.3 76 76 A M + 0 0 116 -27,-0.5 -27,-2.3 -2,-0.3 2,-0.3 -0.957 36.0 85.5-142.7 119.8 -0.4 -5.5 7.9 77 77 A G - 0 0 29 -2,-0.4 2,-0.4 -29,-0.2 -29,-0.1 -0.877 51.3-123.1 166.0 164.7 3.3 -5.2 8.8 78 78 A S - 0 0 88 -2,-0.3 2,-1.3 -36,-0.1 -34,-0.2 -0.983 19.5-127.2-133.5 143.9 5.9 -3.4 10.9 79 79 A A - 0 0 50 -2,-0.4 2,-0.5 -36,-0.1 -36,-0.1 -0.728 28.6-159.4 -92.0 90.1 9.1 -1.6 9.9 80 80 A D + 0 0 152 -2,-1.3 2,-0.3 0, 0.0 -2,-0.0 -0.592 36.0 125.6 -73.7 119.9 11.7 -3.3 12.1 81 81 A A - 0 0 90 -2,-0.5 -2,-0.0 3,-0.0 0, 0.0 -0.966 62.7 -78.0-168.5 159.9 14.7 -1.0 12.4 82 82 A L - 0 0 140 -2,-0.3 2,-2.2 1,-0.1 0, 0.0 -0.310 52.9-101.9 -65.4 149.3 16.9 0.8 15.0 83 83 A P + 0 0 119 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.495 57.8 172.7 -75.0 77.4 15.5 3.9 16.6 84 84 A E - 0 0 144 -2,-2.2 3,-0.1 1,-0.2 -3,-0.0 -0.546 43.5 -75.9 -87.7 153.8 17.5 6.3 14.6 85 85 A E - 0 0 173 -2,-0.2 2,-0.2 1,-0.1 -1,-0.2 -0.098 56.7-104.0 -46.7 142.0 17.0 10.1 14.7 86 86 A P - 0 0 87 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.526 36.6-176.3 -75.0 136.2 13.8 11.2 12.8 87 87 A S + 0 0 120 -2,-0.2 2,-0.3 -3,-0.1 5,-0.0 -0.766 31.3 117.6-137.2 88.6 14.4 12.9 9.4 88 88 A A - 0 0 72 -2,-0.3 2,-0.2 2,-0.0 4,-0.0 -0.988 46.7-135.3-151.0 152.2 11.2 14.1 7.8 89 89 A K S S+ 0 0 184 -2,-0.3 2,-2.6 3,-0.0 -2,-0.0 -0.669 78.6 3.8-107.2 163.5 9.8 17.5 6.7 90 90 A T S S+ 0 0 143 -2,-0.2 2,-0.3 2,-0.0 -2,-0.0 -0.409 131.3 27.5 66.4 -77.8 6.4 18.9 7.1 91 91 A S S S- 0 0 96 -2,-2.6 3,-0.1 3,-0.0 0, 0.0 -0.769 73.5-153.2-113.7 159.5 5.1 16.0 9.3 92 92 A G - 0 0 54 -2,-0.3 3,-0.1 1,-0.1 -3,-0.0 -0.867 23.1-127.7-129.9 163.2 7.0 13.6 11.5 93 93 A P - 0 0 88 0, 0.0 2,-2.9 0, 0.0 -1,-0.1 0.890 30.8-178.2 -75.0 -42.4 6.5 10.1 12.8 94 94 A S + 0 0 120 1,-0.2 2,-0.0 2,-0.1 -3,-0.0 -0.331 45.2 113.4 75.4 -59.1 6.9 11.0 16.5 95 95 A S 0 0 120 -2,-2.9 -1,-0.2 1,-0.2 0, 0.0 -0.237 360.0 360.0 -48.4 115.3 6.6 7.4 17.5 96 96 A G 0 0 113 -3,-0.1 -1,-0.2 -13,-0.0 -2,-0.1 0.260 360.0 360.0-179.7 360.0 10.0 6.5 18.8