==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-MAY-04 1WH2 . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN AT5G08430; . SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; . AUTHOR N.NAMEKI,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 78 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6121.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 14.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 10.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 12.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 116 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-104.1 -13.5 -12.5 1.0 2 2 A S - 0 0 132 1,-0.1 0, 0.0 2,-0.0 0, 0.0 0.892 360.0-168.5 57.6 48.1 -16.2 -12.2 -1.8 3 3 A S + 0 0 123 1,-0.1 2,-0.2 2,-0.0 -1,-0.1 -0.140 25.2 123.9 -62.7 164.9 -13.7 -11.5 -4.7 4 4 A G - 0 0 69 53,-0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.796 25.6-179.4 179.5-139.8 -15.1 -10.3 -8.1 5 5 A S - 0 0 66 -2,-0.2 3,-0.1 3,-0.0 -2,-0.0 0.540 16.4-155.1 105.2 111.3 -14.6 -7.4 -10.6 6 6 A S - 0 0 127 2,-0.0 2,-0.2 1,-0.0 0, 0.0 0.732 68.4 -42.1 -76.5 -26.4 -16.7 -7.4 -13.8 7 7 A G S S- 0 0 50 0, 0.0 2,-1.1 0, 0.0 -1,-0.0 -0.784 106.2 -7.0-172.7-160.9 -14.2 -5.2 -15.8 8 8 A V S S- 0 0 158 -2,-0.2 2,-0.2 -3,-0.1 -3,-0.0 -0.605 71.0-171.4 -61.2 94.2 -12.0 -2.1 -15.5 9 9 A R - 0 0 161 -2,-1.1 2,-0.3 1,-0.1 0, 0.0 -0.513 30.3-100.6 -71.7 161.0 -13.1 -0.8 -12.1 10 10 A V - 0 0 141 -2,-0.2 2,-0.3 2,-0.0 -1,-0.1 -0.619 41.3-165.6 -66.9 148.8 -12.0 2.5 -10.6 11 11 A L - 0 0 101 -2,-0.3 2,-0.3 -3,-0.0 -3,-0.0 -0.952 4.8-171.0-134.3 147.2 -9.2 2.0 -8.2 12 12 A S - 0 0 82 -2,-0.3 2,-0.8 2,-0.0 -2,-0.0 -0.916 31.2-109.5-136.0 160.3 -8.0 4.6 -5.7 13 13 A Y - 0 0 70 -2,-0.3 2,-0.7 59,-0.1 -2,-0.0 -0.858 38.0-161.9 -97.8 101.8 -5.0 5.0 -3.3 14 14 A D + 0 0 50 -2,-0.8 21,-1.9 1,-0.1 5,-0.3 -0.781 24.0 179.9 -92.2 116.3 -6.5 4.6 0.2 15 15 A K S S+ 0 0 64 -2,-0.7 21,-0.8 20,-0.2 -1,-0.1 0.493 88.4 47.4 -82.5 2.1 -4.5 5.9 3.0 16 16 A E S S+ 0 0 172 19,-0.1 18,-0.1 20,-0.1 2,-0.1 0.888 98.2 59.9-112.2 -61.7 -7.4 4.7 5.2 17 17 A K S S- 0 0 114 1,-0.1 2,-1.1 16,-0.1 18,-0.4 -0.392 87.0-109.9 -76.4 153.8 -8.6 1.2 4.2 18 18 A L + 0 0 89 1,-0.2 16,-0.3 16,-0.2 -1,-0.1 -0.748 67.9 134.7 -82.9 99.6 -6.3 -1.9 4.5 19 19 A N + 0 0 17 14,-1.5 37,-2.1 -2,-1.1 2,-0.5 0.339 38.4 84.7-129.9 -0.7 -6.0 -2.5 0.7 20 20 A W E -AB 33 55A 4 13,-2.4 13,-2.4 35,-0.3 35,-0.2 -0.965 52.5-166.1-125.3 118.2 -2.3 -3.1 0.1 21 21 A L E - B 0 54A 29 33,-2.8 33,-1.6 -2,-0.5 2,-0.3 -0.593 5.0-169.4 -90.8 157.7 -0.5 -6.5 0.4 22 22 A Y E -A 30 0A 37 8,-0.9 8,-2.7 -2,-0.2 2,-0.5 -0.986 22.2-127.1-145.0 154.4 3.2 -7.2 0.5 23 23 A K E -A 29 0A 112 29,-0.4 6,-0.3 -2,-0.3 29,-0.1 -0.894 30.0-144.6 -96.1 121.8 5.5 -10.3 0.3 24 24 A D > - 0 0 13 4,-3.1 3,-0.6 -2,-0.5 -1,-0.0 -0.185 27.1-102.0 -78.5 174.1 8.0 -10.4 3.2 25 25 A P T 3 S+ 0 0 128 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.510 122.1 64.0 -84.3 -3.3 11.7 -11.7 3.0 26 26 A Q T 3 S- 0 0 150 2,-0.2 -3,-0.0 0, 0.0 0, 0.0 0.721 122.7-112.0 -73.6 -25.0 10.6 -15.1 4.6 27 27 A G S < S+ 0 0 35 -3,-0.6 2,-0.2 1,-0.3 -4,-0.0 0.301 74.7 131.5 112.4 -2.4 8.6 -15.3 1.4 28 28 A L - 0 0 97 -5,-0.1 -4,-3.1 1,-0.0 2,-0.5 -0.547 58.2-125.6 -85.8 143.2 5.1 -15.0 3.0 29 29 A V E -A 23 0A 68 -6,-0.3 -6,-0.2 -2,-0.2 2,-0.2 -0.780 37.2-176.0 -81.7 130.0 2.3 -12.6 1.8 30 30 A Q E -A 22 0A 68 -8,-2.7 -8,-0.9 -2,-0.5 3,-0.1 -0.598 26.5 -15.1-113.7 176.1 1.2 -10.4 4.8 31 31 A G E - 0 0 42 1,-0.2 2,-0.2 -2,-0.2 -10,-0.2 -0.393 42.3-124.1 88.4-156.5 -1.5 -7.7 5.3 32 32 A P E + 0 0 39 0, 0.0 2,-0.3 0, 0.0 -11,-0.2 0.442 48.2 179.5 -76.3 171.5 -3.3 -6.0 3.8 33 33 A F E -A 20 0A 38 -13,-2.4 -13,-2.4 -2,-0.2 -14,-1.5 -0.849 27.4-108.4-131.8 162.1 -2.2 -2.7 5.2 34 34 A S > - 0 0 7 -16,-0.3 4,-2.4 -2,-0.3 3,-0.4 -0.580 30.7-113.0 -86.7 161.7 -3.3 0.9 4.5 35 35 A L H > S+ 0 0 3 -21,-1.9 4,-2.9 -18,-0.4 5,-0.2 0.857 118.4 61.2 -64.9 -29.5 -1.1 3.4 2.7 36 36 A T H > S+ 0 0 80 -21,-0.8 4,-2.5 2,-0.2 -1,-0.2 0.899 109.9 41.1 -58.0 -42.7 -0.8 5.4 6.0 37 37 A Q H > S+ 0 0 63 -3,-0.4 4,-2.7 2,-0.2 5,-0.3 0.975 117.0 45.3 -70.2 -55.6 0.8 2.3 7.6 38 38 A L H X S+ 0 0 0 -4,-2.4 4,-2.3 1,-0.2 -2,-0.2 0.885 116.5 48.8 -57.8 -41.6 3.0 1.3 4.7 39 39 A K H X S+ 0 0 69 -4,-2.9 4,-1.5 -5,-0.2 -1,-0.2 0.964 110.2 49.3 -56.9 -58.2 4.0 5.0 4.4 40 40 A A H < S+ 0 0 48 -4,-2.5 3,-0.2 1,-0.2 -2,-0.2 0.877 113.5 46.9 -55.2 -42.0 4.8 5.4 8.1 41 41 A W H ><>S+ 0 0 54 -4,-2.7 5,-2.1 1,-0.2 3,-1.2 0.904 111.4 50.3 -65.5 -41.2 6.9 2.2 8.0 42 42 A S H 3<5S+ 0 0 38 -4,-2.3 -1,-0.2 -5,-0.3 -2,-0.2 0.724 114.8 46.2 -65.3 -20.7 8.7 3.5 4.8 43 43 A D T 3<5S+ 0 0 109 -4,-1.5 -1,-0.3 -3,-0.2 -2,-0.2 0.389 112.3 52.4 -95.6 -6.4 9.2 6.8 6.9 44 44 A A T < 5S- 0 0 55 -3,-1.2 -2,-0.2 -5,-0.2 -1,-0.1 0.183 112.9-105.7-117.8 10.0 10.4 4.8 10.0 45 45 A E T 5S+ 0 0 190 -4,-0.3 -3,-0.2 -3,-0.2 -4,-0.1 0.845 82.5 126.0 57.7 38.6 13.2 2.5 8.6 46 46 A Y S -B 20 0A 17 -2,-0.3 3,-2.6 -35,-0.2 2,-0.8 -0.393 53.7 -77.5 -79.2 160.1 -3.7 -4.0 -4.0 56 56 A T T 3 S+ 0 0 62 -37,-2.1 -1,-0.1 1,-0.3 3,-0.1 -0.371 121.0 8.7 -61.0 97.4 -5.9 -6.7 -2.4 57 57 A G T 3 S+ 0 0 75 -2,-0.8 -1,-0.3 1,-0.5 2,-0.1 0.391 102.1 113.9 105.1 0.2 -6.7 -9.1 -5.3 58 58 A E S < S- 0 0 101 -3,-2.6 -1,-0.5 1,-0.1 2,-0.2 -0.408 79.3 -83.1 -78.6 172.9 -4.3 -7.7 -7.9 59 59 A S > - 0 0 80 -2,-0.1 3,-0.8 1,-0.1 4,-0.2 -0.542 27.2-127.1 -72.3 143.7 -1.3 -9.7 -9.1 60 60 A M T 3 S+ 0 0 73 1,-0.2 3,-0.5 -2,-0.2 -1,-0.1 0.739 113.7 58.7 -58.1 -23.7 1.8 -9.7 -7.0 61 61 A E T 3 S+ 0 0 188 1,-0.2 -1,-0.2 -9,-0.0 -3,-0.0 0.698 91.7 62.1 -89.8 -17.4 3.5 -8.6 -10.2 62 62 A S S < S+ 0 0 52 -3,-0.8 -1,-0.2 -7,-0.1 -2,-0.2 0.463 79.8 128.6 -77.8 2.6 1.4 -5.5 -10.7 63 63 A A - 0 0 15 -3,-0.5 -9,-0.3 -4,-0.2 2,-0.2 -0.392 46.8-158.7 -56.6 123.5 3.1 -4.6 -7.4 64 64 A V E -C 53 0B 56 -11,-1.8 -11,-2.3 -2,-0.2 2,-0.3 -0.564 33.8 -79.5 -96.7 164.9 4.7 -1.1 -7.8 65 65 A L E >> -C 52 0B 71 -13,-0.2 4,-2.1 -2,-0.2 3,-1.7 -0.540 33.2-138.4 -67.7 127.6 7.6 0.3 -5.6 66 66 A L H 3> S+ 0 0 2 -15,-2.8 4,-2.2 -2,-0.3 -1,-0.2 0.851 104.1 61.2 -50.7 -37.5 6.2 1.5 -2.3 67 67 A T H 34 S+ 0 0 62 -18,-0.4 -1,-0.3 -16,-0.4 4,-0.2 0.709 108.0 43.7 -73.5 -15.5 8.5 4.6 -2.6 68 68 A D H X> S+ 0 0 81 -3,-1.7 4,-2.9 2,-0.2 3,-1.0 0.825 106.3 58.9 -92.2 -33.5 6.6 5.6 -5.8 69 69 A V H 3X S+ 0 0 1 -4,-2.1 4,-2.6 1,-0.3 -2,-0.2 0.918 102.9 56.9 -53.5 -42.4 3.2 4.8 -4.2 70 70 A L H 3< S+ 0 0 35 -4,-2.2 -1,-0.3 1,-0.2 -2,-0.2 0.762 112.8 38.9 -57.3 -33.1 4.3 7.5 -1.7 71 71 A R H <4 S+ 0 0 181 -3,-1.0 3,-0.3 -4,-0.2 -2,-0.2 0.811 112.9 55.8 -85.5 -37.1 4.8 10.0 -4.5 72 72 A L H < S+ 0 0 110 -4,-2.9 2,-0.6 1,-0.3 -2,-0.2 0.962 121.3 27.9 -62.6 -52.3 1.7 8.9 -6.5 73 73 A S S < S+ 0 0 32 -4,-2.6 -1,-0.3 -5,-0.2 -59,-0.0 -0.942 107.4 82.8-111.7 105.9 -0.7 9.5 -3.6 74 74 A G S S- 0 0 36 -2,-0.6 -3,-0.1 -3,-0.3 2,-0.0 -0.932 82.2 -30.5 178.7-173.5 1.0 12.2 -1.5 75 75 A P - 0 0 120 0, 0.0 2,-0.1 0, 0.0 0, 0.0 -0.319 53.8-130.4 -67.8 147.6 1.3 16.0 -1.3 76 76 A S S S+ 0 0 118 1,-0.1 0, 0.0 2,-0.0 0, 0.0 -0.245 77.5 61.6 -81.1 179.1 1.2 18.3 -4.4 77 77 A S 0 0 126 -2,-0.1 -1,-0.1 1,-0.0 0, 0.0 0.995 360.0 360.0 56.1 85.0 3.8 21.0 -5.2 78 78 A G 0 0 113 0, 0.0 -2,-0.0 0, 0.0 -1,-0.0 0.231 360.0 360.0 161.6 360.0 7.0 18.9 -5.4