==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN 28-MAY-04 1WHH . COMPND 2 MOLECULE: CLIPR-59; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR K.SAITO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 102 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7880.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 52.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 24 23.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 10.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 119 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 166.0 28.1 -17.5 -32.2 2 2 A S - 0 0 111 1,-0.0 3,-0.1 3,-0.0 0, 0.0 0.758 360.0-126.3 62.3 121.2 27.7 -20.2 -29.5 3 3 A S S S- 0 0 145 1,-0.1 2,-0.2 2,-0.1 4,-0.1 0.985 70.4 -50.9 -59.6 -62.5 26.6 -19.0 -26.0 4 4 A G - 0 0 54 1,-0.1 -1,-0.1 2,-0.1 4,-0.1 -0.585 61.1 -77.0-150.0-147.6 29.4 -20.6 -24.1 5 5 A S S S- 0 0 133 -2,-0.2 -1,-0.1 2,-0.2 -2,-0.1 0.902 112.6 -7.7 -94.1 -63.1 31.3 -23.8 -23.5 6 6 A S S S- 0 0 125 1,-0.3 2,-0.3 -3,-0.1 -2,-0.1 0.832 108.8 -93.7-102.1 -51.1 29.1 -26.0 -21.3 7 7 A G - 0 0 58 1,-0.1 -1,-0.3 -4,-0.1 -2,-0.2 -0.938 11.2-130.8 157.2-177.8 26.3 -23.7 -20.3 8 8 A K + 0 0 210 -2,-0.3 -1,-0.1 -4,-0.1 0, 0.0 0.033 54.7 130.3-157.0 31.6 24.9 -21.3 -17.7 9 9 A S - 0 0 106 1,-0.1 2,-0.1 2,-0.0 0, 0.0 -0.702 58.4-110.3 -94.9 145.2 21.3 -22.4 -17.0 10 10 A P - 0 0 94 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 -0.425 11.1-147.1 -73.5 146.3 19.9 -22.9 -13.5 11 11 A S S S+ 0 0 137 1,-0.2 -2,-0.0 -2,-0.1 0, 0.0 0.801 83.7 21.7 -81.5 -31.3 19.2 -26.4 -12.2 12 12 A S S S- 0 0 72 2,-0.0 2,-1.5 0, 0.0 -1,-0.2 -0.959 95.0 -91.0-136.9 154.6 16.2 -25.3 -10.1 13 13 A P + 0 0 138 0, 0.0 2,-0.3 0, 0.0 -2,-0.0 -0.457 65.7 152.8 -67.0 89.0 13.9 -22.2 -10.0 14 14 A S + 0 0 87 -2,-1.5 2,-0.2 3,-0.0 -2,-0.0 -0.925 17.7 175.9-123.2 147.5 15.8 -20.0 -7.7 15 15 A L - 0 0 138 -2,-0.3 3,-0.3 1,-0.0 4,-0.0 -0.749 50.7 -81.5-136.2-177.0 16.0 -16.2 -7.4 16 16 A G S S- 0 0 79 1,-0.3 2,-0.2 -2,-0.2 -1,-0.0 0.841 113.0 -17.6 -58.3 -34.0 17.5 -13.4 -5.3 17 17 A S S S+ 0 0 84 1,-0.0 -1,-0.3 3,-0.0 -3,-0.0 -0.593 76.5 130.9-177.5 109.3 14.7 -13.9 -2.7 18 18 A L S S+ 0 0 117 -3,-0.3 -2,-0.1 -2,-0.2 -1,-0.0 0.016 72.1 58.0-153.8 31.6 11.4 -15.6 -3.0 19 19 A Q S S+ 0 0 189 -4,-0.0 2,-0.1 2,-0.0 -2,-0.0 0.015 72.1 126.9-154.1 31.8 11.2 -18.0 -0.1 20 20 A Q - 0 0 155 1,-0.1 2,-0.8 3,-0.0 3,-0.1 -0.288 66.4 -97.1 -87.7 176.1 11.5 -15.8 3.0 21 21 A R S S- 0 0 222 1,-0.2 -1,-0.1 -2,-0.1 -2,-0.0 -0.845 96.2 -28.0-101.0 105.8 9.2 -15.5 6.0 22 22 A E S S+ 0 0 147 -2,-0.8 -1,-0.2 1,-0.2 2,-0.0 0.825 94.5 172.7 60.5 32.0 6.8 -12.6 5.7 23 23 A G + 0 0 37 -3,-0.1 2,-0.3 2,-0.0 -1,-0.2 -0.292 5.4 163.2 -71.1 157.6 9.4 -10.8 3.5 24 24 A A - 0 0 51 1,-0.1 3,-0.0 65,-0.0 0, 0.0 -0.963 40.5-138.9-170.2 155.1 8.6 -7.6 1.7 25 25 A K S S+ 0 0 128 -2,-0.3 2,-0.2 67,-0.0 -1,-0.1 0.891 89.4 27.2 -86.8 -46.5 10.2 -4.6 -0.1 26 26 A A S S- 0 0 8 4,-0.0 2,-0.3 68,-0.0 68,-0.1 -0.456 70.2-150.5-107.8-178.0 8.0 -1.8 1.3 27 27 A E > - 0 0 123 -2,-0.2 3,-0.7 4,-0.0 15,-0.4 -0.947 34.2 -73.9-149.1 167.6 5.9 -1.4 4.4 28 28 A V T 3 S+ 0 0 74 -2,-0.3 15,-0.2 1,-0.2 3,-0.1 -0.494 114.7 30.7 -68.6 125.0 2.8 0.4 5.8 29 29 A G T 3 S+ 0 0 52 13,-2.3 2,-0.3 1,-0.3 -1,-0.2 0.745 96.2 108.8 98.4 29.7 3.4 4.1 6.1 30 30 A D S < S- 0 0 37 -3,-0.7 12,-1.4 12,-0.3 -1,-0.3 -0.986 73.0-103.7-138.8 148.0 5.9 4.6 3.3 31 31 A Q E +A 41 0A 94 -2,-0.3 64,-2.5 10,-0.2 65,-1.1 -0.539 48.7 168.4 -72.7 127.3 5.8 6.3 -0.1 32 32 A V E -AB 40 94A 0 8,-3.8 8,-1.7 -2,-0.3 2,-0.4 -0.725 30.9-128.2-130.2 179.9 5.5 3.8 -2.9 33 33 A L E > -AB 39 93A 38 60,-2.1 60,-1.4 6,-0.2 3,-1.1 -0.909 15.1-145.5-139.5 109.3 4.9 3.6 -6.7 34 34 A V E >> S-AB 38 92A 14 4,-3.1 4,-1.4 -2,-0.4 3,-1.4 -0.610 87.1 -13.2 -76.6 121.1 2.3 1.3 -8.2 35 35 A A T 34 S- 0 0 45 56,-2.4 -1,-0.3 -2,-0.5 57,-0.2 0.777 119.3 -73.3 59.2 26.6 3.4 0.0 -11.6 36 36 A G T <4 S+ 0 0 33 -3,-1.1 -1,-0.3 55,-0.4 -2,-0.1 0.855 131.1 62.7 56.7 36.6 6.1 2.7 -11.6 37 37 A Q T <4 S+ 0 0 151 -3,-1.4 2,-0.5 1,-0.3 -2,-0.2 0.300 77.6 68.4-147.0 -71.4 3.4 5.4 -12.2 38 38 A K E < S-A 34 0A 108 -4,-1.4 -4,-3.1 -5,-0.1 2,-0.5 -0.512 70.7-148.9 -67.8 114.8 0.7 5.8 -9.5 39 39 A Q E +A 33 0A 106 -2,-0.5 22,-0.3 -6,-0.2 2,-0.3 -0.752 35.3 136.0 -90.1 126.0 2.4 7.3 -6.4 40 40 A G E -A 32 0A 4 -8,-1.7 -8,-3.8 -2,-0.5 2,-0.4 -0.875 47.6-105.0-152.8-175.6 0.8 6.3 -3.1 41 41 A I E -AC 31 59A 52 18,-1.0 18,-1.7 -2,-0.3 -10,-0.2 -0.986 34.2-113.6-127.6 128.8 1.4 5.2 0.4 42 42 A V E + C 0 58A 0 -12,-1.4 -13,-2.3 -2,-0.4 -12,-0.3 -0.372 38.6 166.2 -60.0 124.4 0.8 1.6 1.8 43 43 A R E + 0 0 107 14,-0.9 2,-0.4 1,-0.3 15,-0.2 0.673 68.2 24.6-110.6 -30.2 -2.0 1.7 4.3 44 44 A F E - 0 0 71 13,-0.3 13,-3.9 33,-0.1 2,-0.6 -0.944 61.9-172.6-143.6 118.6 -2.7 -2.0 4.6 45 45 A Y E + C 0 56A 50 -2,-0.4 2,-0.3 11,-0.2 11,-0.2 -0.938 38.8 95.7-115.1 114.9 -0.3 -4.9 4.0 46 46 A G E S- C 0 55A 11 9,-1.7 9,-0.7 -2,-0.6 2,-0.1 -0.940 73.5 -66.6 176.8 163.0 -1.6 -8.4 4.1 47 47 A K E - C 0 54A 130 -2,-0.3 7,-0.2 7,-0.2 6,-0.1 -0.396 49.8-147.7 -66.0 137.3 -3.0 -11.4 2.1 48 48 A T - 0 0 19 3,-0.5 -1,-0.1 5,-0.5 5,-0.0 -0.272 15.0-129.7 -95.7-175.3 -6.4 -10.8 0.5 49 49 A D S S+ 0 0 132 22,-0.2 -1,-0.1 -2,-0.1 23,-0.0 0.701 102.7 55.3-106.6 -30.9 -9.3 -13.1 -0.3 50 50 A F S S+ 0 0 75 1,-0.2 22,-0.0 21,-0.1 -1,-0.0 0.857 120.4 24.0 -71.3 -36.2 -9.9 -12.3 -3.9 51 51 A A S S- 0 0 17 2,-0.1 -3,-0.5 1,-0.1 -1,-0.2 -0.967 81.2-121.7-132.7 148.2 -6.3 -13.0 -4.8 52 52 A P S S+ 0 0 115 0, 0.0 -4,-0.3 0, 0.0 -1,-0.1 0.091 73.3 36.1 -72.2-170.1 -3.6 -15.2 -3.2 53 53 A G S S- 0 0 41 -6,-0.1 -5,-0.5 35,-0.0 2,-0.3 -0.104 103.3 -46.0 59.3-161.0 -0.1 -14.2 -2.0 54 54 A Y E -C 47 0A 93 -7,-0.2 2,-0.3 -9,-0.0 35,-0.3 -0.714 53.5-170.6-106.2 157.8 0.3 -10.8 -0.4 55 55 A W E -C 46 0A 39 -9,-0.7 -9,-1.7 -2,-0.3 2,-0.6 -0.964 20.0-128.7-144.4 159.7 -0.9 -7.3 -1.5 56 56 A Y E -CD 45 87A 3 31,-0.8 2,-2.0 -2,-0.3 31,-0.8 -0.941 9.9-151.5-116.4 115.3 -0.5 -3.7 -0.6 57 57 A G E + D 0 86A 0 -13,-3.9 -14,-0.9 -2,-0.6 -13,-0.3 -0.424 30.2 176.0 -82.3 65.7 -3.6 -1.6 0.0 58 58 A I E -CD 42 85A 0 -2,-2.0 27,-3.3 27,-1.5 2,-0.4 -0.442 21.3-136.5 -72.7 143.7 -2.0 1.7 -1.1 59 59 A E E -CD 41 84A 61 -18,-1.7 -18,-1.0 25,-0.3 25,-0.2 -0.808 12.4-142.6-104.2 143.0 -4.3 4.8 -1.1 60 60 A L - 0 0 8 23,-0.8 20,-0.2 -2,-0.4 -20,-0.1 -0.432 12.0-135.1 -96.1 173.2 -4.3 7.4 -3.9 61 61 A D S S+ 0 0 143 -22,-0.3 -1,-0.1 1,-0.1 -21,-0.1 0.763 88.7 44.1 -97.1 -33.2 -4.7 11.1 -3.8 62 62 A Q S S- 0 0 141 21,-0.1 2,-1.5 18,-0.0 -1,-0.1 -0.887 101.8 -91.6-116.1 146.4 -7.3 11.5 -6.6 63 63 A P S S+ 0 0 94 0, 0.0 20,-0.2 0, 0.0 19,-0.1 -0.307 91.0 104.7 -55.8 86.7 -10.4 9.4 -7.3 64 64 A T + 0 0 81 18,-1.5 19,-0.2 -2,-1.5 18,-0.1 0.044 44.1 126.1-157.3 30.4 -8.7 6.9 -9.7 65 65 A G - 0 0 17 17,-1.8 20,-0.2 16,-0.2 19,-0.1 -0.321 68.3-114.4 -89.6 175.5 -8.3 3.7 -7.6 66 66 A K S S- 0 0 165 18,-1.0 2,-0.3 17,-0.1 19,-0.2 0.798 94.1 -2.6 -78.6 -30.5 -9.4 0.2 -8.4 67 67 A H S S- 0 0 24 17,-1.4 16,-1.2 4,-0.1 17,-0.5 -0.862 74.6-100.2-148.4-179.0 -11.9 0.1 -5.5 68 68 A D S S- 0 0 64 2,-0.6 2,-0.5 -2,-0.3 11,-0.3 -0.321 82.4 -72.6-105.2 48.5 -13.2 2.2 -2.6 69 69 A G S S+ 0 0 0 15,-0.2 7,-0.8 -2,-0.2 8,-0.6 -0.234 119.0 81.1 94.0 -45.9 -11.2 0.5 0.1 70 70 A S E -E 75 0B 34 -2,-0.5 -2,-0.6 5,-0.2 2,-0.6 -0.798 65.1-154.4 -99.0 136.6 -13.3 -2.7 0.0 71 71 A V E > S-E 74 0B 14 3,-3.5 3,-1.7 -2,-0.4 -22,-0.2 -0.922 76.5 -24.4-114.4 110.6 -12.6 -5.4 -2.6 72 72 A F T 3 S- 0 0 186 -2,-0.6 -1,-0.2 1,-0.3 3,-0.1 0.824 129.2 -48.6 60.5 31.9 -15.6 -7.7 -3.5 73 73 A G T 3 S+ 0 0 70 1,-0.3 2,-0.6 -3,-0.0 -1,-0.3 -0.018 115.9 116.4 98.8 -30.2 -17.0 -6.9 -0.0 74 74 A V E < -E 71 0B 54 -3,-1.7 -3,-3.5 -4,-0.1 2,-0.3 -0.635 52.4-156.2 -78.0 117.6 -13.8 -7.6 1.8 75 75 A R E +E 70 0B 173 -2,-0.6 -5,-0.2 -5,-0.3 3,-0.1 -0.672 26.3 162.3 -95.3 149.5 -12.5 -4.5 3.5 76 76 A Y + 0 0 27 -7,-0.8 2,-0.3 1,-0.5 -1,-0.1 0.593 64.9 0.2-129.9 -45.6 -8.9 -3.8 4.4 77 77 A F S S- 0 0 17 -8,-0.6 2,-0.6 -33,-0.1 -1,-0.5 -0.951 70.3-102.9-146.7 164.7 -8.5 -0.1 5.0 78 78 A T + 0 0 115 -2,-0.3 2,-0.3 -3,-0.1 -9,-0.1 -0.817 51.9 145.4 -96.2 123.5 -10.5 3.2 5.0 79 79 A C - 0 0 29 -2,-0.6 3,-0.1 -11,-0.3 4,-0.0 -0.927 48.4 -80.7-148.0 170.6 -10.0 5.4 2.0 80 80 A A >> - 0 0 38 -2,-0.3 3,-0.6 -20,-0.2 4,-0.5 -0.251 69.8 -65.7 -71.7 162.5 -11.9 7.9 -0.2 81 81 A P T 34 S- 0 0 76 0, 0.0 -1,-0.2 0, 0.0 -13,-0.2 -0.275 121.2 -2.7 -52.4 118.5 -14.1 6.7 -3.1 82 82 A R T 34 S+ 0 0 128 -19,-0.1 -17,-1.8 -18,-0.1 -18,-1.5 0.988 104.2 108.4 60.3 63.5 -11.9 5.0 -5.7 83 83 A H T <4 + 0 0 18 -16,-1.2 -23,-0.8 -3,-0.6 -15,-0.2 0.568 46.4 87.9-132.3 -46.0 -8.6 5.6 -4.0 84 84 A G E < -D 59 0A 0 -4,-0.5 -17,-1.4 -17,-0.5 -18,-1.0 -0.329 53.5-171.9 -63.7 141.7 -7.3 2.3 -2.6 85 85 A V E -D 58 0A 10 -27,-3.3 -27,-1.5 -20,-0.2 2,-0.7 -0.957 12.0-157.1-142.1 120.1 -5.2 0.2 -5.0 86 86 A F E +D 57 0A 11 -2,-0.4 -29,-0.2 -29,-0.2 -2,-0.0 -0.859 26.6 158.0-100.4 115.4 -4.0 -3.3 -4.4 87 87 A A E -D 56 0A 4 -31,-0.8 -31,-0.8 -2,-0.7 5,-0.1 -0.989 45.8 -92.8-137.8 145.6 -0.9 -4.3 -6.5 88 88 A P >> - 0 0 34 0, 0.0 3,-1.6 0, 0.0 4,-1.0 -0.233 33.4-123.0 -56.0 139.1 1.8 -7.0 -6.1 89 89 A A G >4 S+ 0 0 20 1,-0.3 3,-1.9 -35,-0.3 -34,-0.1 0.925 116.9 54.0 -48.0 -50.9 5.0 -5.8 -4.3 90 90 A S G 34 S+ 0 0 102 1,-0.3 -1,-0.3 -55,-0.0 0, 0.0 0.774 109.8 49.8 -55.8 -24.5 7.0 -6.8 -7.3 91 91 A R G <4 S+ 0 0 137 -3,-1.6 -56,-2.4 -56,-0.0 -55,-0.4 0.617 107.3 68.9 -88.3 -15.1 4.6 -4.5 -9.1 92 92 A I E << -B 34 0A 14 -3,-1.9 2,-0.3 -4,-1.0 -58,-0.2 -0.695 67.8-155.7-104.4 157.9 5.1 -1.7 -6.6 93 93 A Q E -B 33 0A 109 -60,-1.4 -60,-2.1 -2,-0.3 2,-0.3 -0.835 14.7-117.3-128.3 166.3 8.2 0.4 -6.0 94 94 A R E +B 32 0A 126 -2,-0.3 -62,-0.2 -62,-0.3 3,-0.1 -0.820 23.3 173.9-107.2 145.4 9.7 2.4 -3.1 95 95 A I + 0 0 80 -64,-2.5 2,-0.3 -2,-0.3 -63,-0.2 0.685 66.2 54.8-115.6 -36.9 10.3 6.2 -3.0 96 96 A G + 0 0 20 -65,-1.1 -1,-0.2 1,-0.1 -66,-0.0 -0.796 47.3 179.5-105.4 146.5 11.4 6.9 0.5 97 97 A S S S+ 0 0 120 -2,-0.3 -1,-0.1 1,-0.2 -67,-0.0 -0.181 71.3 41.6-134.9 40.9 14.2 5.2 2.4 98 98 A G > - 0 0 41 3,-0.1 3,-0.5 1,-0.0 -1,-0.2 -0.337 47.7-170.9 172.8 99.2 14.1 6.9 5.8 99 99 A P T 3 S+ 0 0 127 0, 0.0 2,-0.3 0, 0.0 -1,-0.0 0.789 95.9 31.6 -67.8 -27.8 11.1 7.9 7.9 100 100 A S T 3 S+ 0 0 111 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.670 94.8 108.8-133.3 79.0 13.3 9.9 10.3 101 101 A S < 0 0 112 -3,-0.5 -3,-0.1 -2,-0.3 -4,-0.0 -0.905 360.0 360.0-144.1 170.8 16.3 11.4 8.4 102 102 A G 0 0 147 -2,-0.3 -4,-0.0 0, 0.0 -1,-0.0 -0.069 360.0 360.0-174.2 360.0 17.6 14.7 7.2