==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-MAY-04 1WHK . COMPND 2 MOLECULE: RIKEN CDNA 1700024K14; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR K.SAITO,N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA, . 91 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7027.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 38 41.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 19 20.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 94 0, 0.0 2,-0.3 0, 0.0 6,-0.0 0.000 360.0 360.0 360.0 93.7 14.8 -15.5 0.8 2 2 A S - 0 0 94 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.799 360.0 -18.5-160.0 112.1 12.5 -15.3 3.9 3 3 A S S S- 0 0 138 -2,-0.3 6,-0.1 1,-0.1 0, 0.0 0.825 137.1 -34.2 60.5 32.0 12.3 -12.6 6.5 4 4 A G S S+ 0 0 62 4,-0.2 5,-0.1 2,-0.1 -1,-0.1 0.937 99.5 124.7 86.2 77.9 15.7 -11.4 5.4 5 5 A S S S+ 0 0 85 3,-0.2 2,-0.4 1,-0.2 3,-0.1 0.610 73.7 11.1-126.6 -62.1 17.9 -14.3 4.3 6 6 A S S S+ 0 0 104 2,-0.1 -1,-0.2 1,-0.1 -2,-0.1 -0.949 123.6 26.4-131.7 113.3 19.3 -13.9 0.8 7 7 A G S S- 0 0 64 -2,-0.4 -1,-0.1 -3,-0.1 -3,-0.0 0.562 103.2-103.1 114.7 16.0 19.0 -10.6 -1.1 8 8 A E - 0 0 182 1,-0.1 2,-0.3 -3,-0.1 -3,-0.2 0.169 32.8-111.4 56.1 176.5 18.9 -8.2 1.8 9 9 A G + 0 0 62 -5,-0.1 -1,-0.1 -6,-0.1 -2,-0.0 -0.752 33.8 170.0-151.5 99.8 15.6 -6.5 2.9 10 10 A T + 0 0 130 -2,-0.3 2,-1.1 2,-0.0 -2,-0.0 -0.111 36.4 134.5 -99.0 35.1 14.9 -2.8 2.4 11 11 A V + 0 0 105 1,-0.1 2,-0.5 2,-0.0 -2,-0.0 -0.733 18.3 160.3 -89.6 97.6 11.2 -3.2 3.4 12 12 A K + 0 0 162 -2,-1.1 2,-0.3 2,-0.0 -1,-0.1 -0.659 27.3 116.8-119.0 74.6 10.5 -0.4 5.8 13 13 A L + 0 0 21 -2,-0.5 3,-0.1 1,-0.1 -2,-0.0 -0.947 10.7 135.6-145.2 120.5 6.7 0.0 5.8 14 14 A H - 0 0 143 -2,-0.3 2,-0.3 1,-0.3 -1,-0.1 0.629 69.4 -47.0-126.2 -54.1 4.3 -0.5 8.7 15 15 A E S S+ 0 0 124 17,-0.0 -1,-0.3 3,-0.0 16,-0.2 -0.940 108.5 41.2-179.4 159.9 1.7 2.4 8.8 16 16 A G S S+ 0 0 66 14,-1.3 2,-0.2 -2,-0.3 15,-0.1 0.794 83.4 135.6 60.9 28.3 1.3 6.1 8.7 17 17 A S - 0 0 25 13,-0.4 13,-2.3 2,-0.0 2,-0.4 -0.610 50.3-131.9-104.8 166.3 3.9 6.2 5.9 18 18 A Q E +A 29 0A 97 -2,-0.2 2,-0.3 11,-0.2 11,-0.2 -0.977 25.2 173.7-123.8 128.6 3.9 8.1 2.6 19 19 A V E -A 28 0A 0 9,-2.2 9,-1.8 -2,-0.4 2,-0.5 -0.982 20.6-141.8-134.7 145.5 4.8 6.6 -0.8 20 20 A L E -AB 27 81A 65 61,-2.5 61,-1.0 -2,-0.3 7,-0.2 -0.906 25.2-117.4-110.2 132.0 4.7 7.9 -4.4 21 21 A L E - B 0 80A 18 5,-1.3 4,-0.4 -2,-0.5 59,-0.2 -0.363 11.2-146.2 -65.3 140.9 3.6 5.8 -7.3 22 22 A T S S+ 0 0 88 57,-1.0 -1,-0.1 2,-0.1 58,-0.1 -0.084 94.8 34.4 -98.8 33.3 6.2 5.2 -10.0 23 23 A S S S+ 0 0 85 3,-0.1 -1,-0.1 56,-0.0 57,-0.0 0.411 125.5 30.7-147.5 -47.5 3.6 5.2 -12.8 24 24 A S S S- 0 0 81 2,-0.1 -2,-0.1 0, 0.0 -4,-0.0 0.642 92.7-134.3 -94.8 -19.2 0.8 7.6 -12.1 25 25 A N + 0 0 115 -4,-0.4 2,-0.4 1,-0.2 -3,-0.1 0.969 57.2 133.6 63.0 55.8 3.0 10.0 -10.1 26 26 A E - 0 0 91 -5,-0.1 -5,-1.3 2,-0.0 -1,-0.2 -0.973 54.9-122.4-141.8 124.1 0.6 10.5 -7.2 27 27 A M E -A 20 0A 100 -2,-0.4 2,-0.3 -7,-0.2 -7,-0.2 -0.184 30.7-171.5 -60.0 154.1 1.3 10.4 -3.5 28 28 A A E -A 19 0A 2 -9,-1.8 -9,-2.2 20,-0.1 2,-0.4 -0.981 21.3-125.6-153.3 138.3 -0.6 7.9 -1.3 29 29 A T E -AC 18 47A 52 18,-1.1 18,-1.1 -2,-0.3 2,-0.5 -0.697 27.0-126.1 -87.4 132.4 -0.9 7.2 2.4 30 30 A V E + C 0 46A 1 -13,-2.3 -14,-1.3 -2,-0.4 -13,-0.4 -0.665 40.9 156.5 -80.9 120.4 -0.1 3.7 3.6 31 31 A R + 0 0 106 14,-3.2 2,-0.3 -2,-0.5 -1,-0.2 0.790 63.1 28.1-107.7 -50.3 -3.0 2.2 5.6 32 32 A Y - 0 0 69 13,-0.9 13,-0.5 -17,-0.1 2,-0.3 -0.807 60.8-170.5-115.5 157.1 -2.6 -1.6 5.3 33 33 A V + 0 0 44 -2,-0.3 11,-0.2 11,-0.2 9,-0.0 -0.948 41.5 48.6-150.9 125.9 0.5 -3.8 4.8 34 34 A G E S-D 43 0B 11 9,-2.0 9,-2.5 -2,-0.3 -2,-0.0 -0.854 84.9 -27.7 140.8-176.0 0.9 -7.5 4.1 35 35 A P E -D 42 0B 75 0, 0.0 7,-0.2 0, 0.0 2,-0.2 -0.303 56.3-137.5 -70.1 154.7 -0.4 -10.3 1.8 36 36 A T - 0 0 15 5,-1.5 5,-0.3 3,-0.2 0, 0.0 -0.581 10.2-139.6-108.1 172.5 -3.8 -10.2 0.3 37 37 A D S S+ 0 0 114 22,-0.3 -1,-0.1 -2,-0.2 23,-0.1 0.728 101.4 52.2-101.0 -31.0 -6.6 -12.8 -0.2 38 38 A F S S+ 0 0 94 21,-0.2 2,-0.2 24,-0.0 22,-0.1 0.813 119.9 30.1 -75.2 -31.2 -7.7 -11.8 -3.7 39 39 A A S S- 0 0 31 2,-0.2 2,-0.8 0, 0.0 -3,-0.2 -0.757 83.2-112.9-123.8 170.7 -4.1 -11.9 -5.0 40 40 A S S S+ 0 0 126 -2,-0.2 2,-0.3 -5,-0.1 -3,-0.1 -0.800 80.2 40.7-108.7 90.8 -0.9 -13.9 -4.2 41 41 A G S S- 0 0 30 -2,-0.8 -5,-1.5 -5,-0.3 2,-0.2 -0.907 90.4 -54.6 158.3 175.2 1.6 -11.5 -2.8 42 42 A I E +D 35 0B 82 -2,-0.3 2,-0.3 -7,-0.2 -2,-0.1 -0.538 52.3 173.7 -81.5 145.7 2.3 -8.5 -0.5 43 43 A W E -D 34 0B 53 -9,-2.5 -9,-2.0 -2,-0.2 2,-0.4 -0.867 26.9-132.0-142.3 175.1 0.4 -5.3 -0.9 44 44 A L E -E 75 0C 0 31,-1.3 2,-1.0 -2,-0.3 31,-0.9 -0.900 20.5-132.5-139.2 107.5 -0.2 -1.9 0.7 45 45 A G E -E 74 0C 0 -13,-0.5 -14,-3.2 -2,-0.4 -13,-0.9 -0.406 34.8-171.1 -60.9 97.8 -3.6 -0.5 1.3 46 46 A L E -C 30 0A 0 27,-2.2 2,-0.4 -2,-1.0 27,-0.3 -0.553 10.8-161.3 -91.6 157.7 -3.3 3.1 -0.0 47 47 A E E -C 29 0A 44 -18,-1.1 -18,-1.1 25,-0.2 25,-0.2 -0.930 3.4-163.3-144.6 116.4 -5.8 5.9 0.3 48 48 A L - 0 0 21 23,-0.5 -20,-0.1 -2,-0.4 5,-0.1 -0.482 28.5-121.6 -93.8 166.7 -6.0 9.0 -1.8 49 49 A R S S+ 0 0 255 -2,-0.2 2,-0.3 18,-0.1 23,-0.1 -0.120 91.0 27.1 -98.4 35.6 -7.9 12.2 -1.0 50 50 A S S S- 0 0 59 21,-0.2 2,-1.5 18,-0.1 -2,-0.2 -0.975 100.4 -70.3-175.9 174.4 -9.9 12.0 -4.2 51 51 A A S S+ 0 0 55 -2,-0.3 20,-0.3 1,-0.2 19,-0.1 -0.636 80.4 114.9 -85.4 86.1 -11.5 9.7 -6.8 52 52 A K + 0 0 146 -2,-1.5 19,-0.2 19,-0.3 2,-0.2 -0.081 59.7 66.1-143.6 36.0 -8.4 8.5 -8.7 53 53 A G S S- 0 0 16 17,-1.7 20,-0.2 16,-0.1 19,-0.1 -0.562 74.4-118.3-136.8-158.9 -8.2 4.8 -7.9 54 54 A K S S+ 0 0 180 18,-1.0 2,-0.3 -2,-0.2 19,-0.1 -0.024 78.1 86.4-142.0 30.7 -10.0 1.5 -8.5 55 55 A N - 0 0 30 17,-0.9 15,-1.4 13,-0.1 16,-1.3 -0.944 60.4-147.1-134.0 155.0 -11.0 0.4 -5.0 56 56 A D - 0 0 110 2,-0.6 2,-0.2 -2,-0.3 11,-0.2 -0.100 68.7 -82.6-110.4 33.0 -13.8 1.0 -2.6 57 57 A G S S+ 0 0 3 9,-0.2 8,-1.8 -11,-0.1 7,-1.0 -0.225 112.4 41.1 97.7 -44.5 -11.8 0.8 0.5 58 58 A A E -F 63 0D 15 -2,-0.2 -2,-0.6 5,-0.2 2,-0.4 -0.950 63.6-152.2-136.7 156.3 -11.8 -3.0 0.8 59 59 A V E > -F 62 0D 38 3,-1.6 3,-0.6 -2,-0.3 2,-0.4 -0.950 62.3 -38.2-134.4 114.4 -11.5 -5.9 -1.6 60 60 A G T 3 S- 0 0 75 -2,-0.4 -2,-0.0 1,-0.2 0, 0.0 -0.601 119.2 -22.3 79.2-130.8 -13.1 -9.3 -1.0 61 61 A D T 3 S+ 0 0 166 -2,-0.4 2,-0.4 2,-0.0 -1,-0.2 -0.050 120.5 83.5-106.9 30.0 -13.1 -10.5 2.6 62 62 A K E < -F 59 0D 70 -3,-0.6 -3,-1.6 0, 0.0 2,-0.5 -0.993 65.7-145.3-138.0 129.6 -10.1 -8.3 3.7 63 63 A R E +F 58 0D 203 -2,-0.4 -5,-0.2 -5,-0.2 3,-0.1 -0.803 25.1 162.7 -96.7 130.0 -10.2 -4.6 4.7 64 64 A Y - 0 0 8 -7,-1.0 2,-0.3 -2,-0.5 -6,-0.2 0.667 65.8 -29.7-113.0 -31.3 -7.2 -2.4 3.8 65 65 A F - 0 0 13 -8,-1.8 -1,-0.4 -34,-0.1 2,-0.4 -0.967 55.2-108.7-171.2 179.8 -8.7 1.1 4.3 66 66 A T + 0 0 99 -2,-0.3 2,-0.3 -3,-0.1 -9,-0.2 -0.970 50.5 122.1-133.8 119.0 -11.8 3.2 4.2 67 67 A C - 0 0 27 -2,-0.4 3,-0.1 -11,-0.2 -9,-0.1 -0.962 59.2 -64.8-161.5 173.4 -12.5 5.8 1.5 68 68 A K S > S- 0 0 127 -2,-0.3 3,-0.9 1,-0.2 4,-0.4 -0.069 76.2 -64.4 -61.4 167.5 -15.0 7.0 -1.1 69 69 A P T 3 S+ 0 0 87 0, 0.0 -13,-0.2 0, 0.0 -1,-0.2 -0.352 122.2 1.4 -58.9 124.5 -15.7 4.8 -4.2 70 70 A N T 3 S+ 0 0 83 -15,-1.4 -17,-1.7 -3,-0.1 -18,-0.2 0.948 99.8 116.5 61.8 51.3 -12.5 4.5 -6.4 71 71 A Y < + 0 0 44 -16,-1.3 -23,-0.5 -3,-0.9 -19,-0.3 0.752 63.5 44.7-112.4 -50.2 -10.4 6.6 -4.0 72 72 A G - 0 0 0 -17,-0.5 -18,-1.0 -4,-0.4 -17,-0.9 -0.428 66.7-154.7 -94.4 171.7 -7.7 4.3 -2.7 73 73 A V - 0 0 23 -27,-0.3 -27,-2.2 -20,-0.2 2,-0.5 -0.945 13.1-127.0-143.1 163.0 -5.5 1.8 -4.6 74 74 A L E +E 45 0C 20 -2,-0.3 2,-0.3 -29,-0.2 -29,-0.2 -0.956 37.9 153.2-118.5 119.8 -3.5 -1.4 -3.9 75 75 A V E -E 44 0C 22 -31,-0.9 -31,-1.3 -2,-0.5 5,-0.1 -0.907 38.2-110.1-139.2 166.1 0.2 -1.6 -4.9 76 76 A R >> - 0 0 106 -2,-0.3 3,-1.2 -33,-0.2 4,-0.9 -0.686 29.5-114.6 -99.0 152.4 3.3 -3.5 -3.9 77 77 A P G >4 S+ 0 0 32 0, 0.0 3,-2.5 0, 0.0 -1,-0.1 0.935 121.7 48.6 -45.9 -56.9 6.4 -1.9 -2.2 78 78 A S G 34 S+ 0 0 116 1,-0.3 0, 0.0 3,-0.0 0, 0.0 0.764 111.3 53.2 -56.5 -23.5 8.6 -2.6 -5.2 79 79 A R G <4 S+ 0 0 131 -3,-1.2 -57,-1.0 -58,-0.0 -1,-0.3 0.584 113.3 50.7 -87.1 -11.8 5.7 -1.0 -7.1 80 80 A V E << -B 21 0A 9 -3,-2.5 2,-0.3 -4,-0.9 -59,-0.2 -0.745 66.8-160.3-121.7 170.3 5.9 2.1 -4.8 81 81 A T E +B 20 0A 72 -61,-1.0 -61,-2.5 -2,-0.2 2,-0.3 -0.932 7.7 179.2-145.1 167.2 8.6 4.5 -3.6 82 82 A Y - 0 0 91 -2,-0.3 -63,-0.1 -63,-0.3 -2,-0.0 -0.911 29.0-108.8-171.2 142.4 9.3 7.0 -0.8 83 83 A R + 0 0 230 -2,-0.3 -65,-0.1 1,-0.1 3,-0.1 -0.008 33.0 163.4 -65.6 177.0 12.0 9.3 0.4 84 84 A G + 0 0 74 1,-0.1 -1,-0.1 2,-0.0 0, 0.0 0.300 40.2 96.7-163.0 -42.9 14.1 8.7 3.5 85 85 A I - 0 0 152 1,-0.1 -1,-0.1 0, 0.0 -2,-0.0 -0.028 54.1-151.6 -57.3 166.3 17.3 10.7 3.6 86 86 A S + 0 0 123 -3,-0.1 -1,-0.1 0, 0.0 -3,-0.0 0.813 24.5 170.9-105.8 -66.0 17.4 14.0 5.5 87 87 A G - 0 0 43 2,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.052 53.5 -13.0 75.7 177.0 19.9 16.4 3.9 88 88 A P - 0 0 122 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.240 54.7-151.4 -52.1 126.7 20.4 20.1 4.8 89 89 A S S S+ 0 0 125 0, 0.0 2,-0.1 0, 0.0 -2,-0.0 0.825 74.8 84.2 -70.0 -31.9 17.6 21.4 6.9 90 90 A S 0 0 105 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.406 360.0 360.0 -72.7 148.0 18.1 24.9 5.5 91 91 A G 0 0 151 -2,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.371 360.0 360.0 141.4 360.0 16.4 25.8 2.2