==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 28-MAY-04 1WHV . COMPND 2 MOLECULE: POLY(A)-SPECIFIC RIBONUCLEASE; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR T.NAGATA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, . 100 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8052.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 58.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 15.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 9.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 24.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 423 A G 0 0 141 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 116.2 8.7 17.7 37.0 2 424 A S - 0 0 123 2,-0.1 2,-0.2 0, 0.0 0, 0.0 -0.989 360.0-144.8-141.3 148.6 7.2 21.0 35.9 3 425 A S + 0 0 120 -2,-0.3 0, 0.0 2,-0.0 0, 0.0 -0.621 54.9 49.7-108.1 168.7 4.2 23.1 36.8 4 426 A G S S- 0 0 77 -2,-0.2 2,-0.5 1,-0.1 -2,-0.1 0.138 72.1-105.9 85.9 155.1 1.8 25.2 34.8 5 427 A S + 0 0 133 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.918 49.6 149.9-125.1 105.7 -0.2 24.4 31.6 6 428 A S - 0 0 118 -2,-0.5 -2,-0.0 1,-0.2 0, 0.0 -0.709 41.2 -99.7-125.3 176.7 1.0 25.9 28.4 7 429 A G + 0 0 70 -2,-0.2 -1,-0.2 1,-0.1 3,-0.1 0.167 48.6 133.5 -80.2-157.8 1.1 25.1 24.7 8 430 A G + 0 0 63 1,-0.2 2,-0.3 0, 0.0 -1,-0.1 -0.674 51.5 63.1 155.4 -95.0 3.9 23.6 22.6 9 431 A P S S- 0 0 129 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 -0.491 79.3-121.3 -69.7 127.6 3.3 20.7 20.1 10 432 A D - 0 0 160 -2,-0.3 2,-0.4 1,-0.1 0, 0.0 -0.022 29.6-101.3 -60.5 170.7 0.9 21.5 17.3 11 433 A L - 0 0 161 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.800 28.1-134.2-101.4 140.4 -2.2 19.5 16.7 12 434 A Q - 0 0 125 -2,-0.4 3,-0.1 1,-0.1 0, 0.0 -0.698 23.1-114.2 -94.4 143.9 -2.5 16.8 14.0 13 435 A P - 0 0 100 0, 0.0 -1,-0.1 0, 0.0 3,-0.0 -0.194 55.9 -57.6 -69.8 164.2 -5.5 16.5 11.7 14 436 A K - 0 0 187 1,-0.2 2,-1.8 2,-0.1 3,-0.4 -0.051 54.4-117.8 -42.2 138.5 -8.0 13.6 11.7 15 437 A R + 0 0 92 1,-0.2 66,-0.5 -3,-0.1 65,-0.5 -0.543 68.0 131.2 -84.6 74.9 -6.2 10.3 11.1 16 438 A D + 0 0 68 -2,-1.8 64,-0.2 64,-0.1 -1,-0.2 0.876 65.7 55.6 -91.0 -47.0 -8.0 9.4 7.9 17 439 A H S S+ 0 0 66 -3,-0.4 39,-0.6 40,-0.1 2,-0.2 0.816 96.8 84.1 -55.9 -31.2 -5.0 8.5 5.7 18 440 A V E -A 55 0A 14 37,-0.2 62,-1.2 35,-0.0 2,-0.4 -0.479 65.6-162.5 -76.1 144.7 -4.1 6.0 8.4 19 441 A L E -AB 54 79A 0 35,-2.0 35,-1.6 60,-0.2 2,-0.8 -0.994 15.6-136.2-133.6 130.2 -5.7 2.5 8.4 20 442 A H E -AB 53 78A 1 58,-2.9 58,-1.5 -2,-0.4 2,-0.5 -0.745 27.7-178.4 -87.7 108.7 -5.9 0.0 11.2 21 443 A V E -AB 52 77A 0 31,-1.3 31,-1.5 -2,-0.8 2,-0.6 -0.931 11.1-165.1-112.7 126.5 -5.1 -3.4 9.9 22 444 A T E + B 0 76A 45 54,-2.3 54,-0.8 -2,-0.5 29,-0.2 -0.906 18.8 165.5-114.0 106.8 -5.2 -6.5 12.1 23 445 A F - 0 0 4 -2,-0.6 52,-0.1 52,-0.2 2,-0.1 -0.824 39.4 -94.5-119.1 158.3 -3.6 -9.6 10.6 24 446 A P > - 0 0 32 0, 0.0 3,-2.9 0, 0.0 26,-0.1 -0.360 34.2-114.3 -69.8 147.5 -2.4 -13.0 12.1 25 447 A K T 3 S+ 0 0 165 1,-0.3 25,-0.0 -2,-0.1 -2,-0.0 0.862 111.7 76.7 -47.9 -40.3 1.2 -13.4 13.3 26 448 A E T 3 S+ 0 0 148 2,-0.0 -1,-0.3 0, 0.0 -3,-0.0 0.769 85.7 83.6 -42.8 -28.2 1.5 -16.0 10.5 27 449 A W < - 0 0 38 -3,-2.9 2,-0.3 3,-0.0 3,-0.0 0.075 65.7-165.3 -66.6-175.3 1.7 -12.9 8.3 28 450 A K >> - 0 0 124 1,-0.0 4,-1.9 0, 0.0 3,-1.1 -0.981 42.3 -84.7-166.6 166.5 4.9 -10.9 7.6 29 451 A T H 3> S+ 0 0 62 -2,-0.3 4,-2.0 1,-0.3 5,-0.3 0.771 126.7 58.4 -50.0 -26.8 6.3 -7.6 6.3 30 452 A S H 3> S+ 0 0 66 2,-0.2 4,-2.0 1,-0.2 -1,-0.3 0.891 103.9 48.6 -71.7 -40.9 6.1 -9.3 2.9 31 453 A D H <> S+ 0 0 68 -3,-1.1 4,-2.3 3,-0.2 -2,-0.2 0.891 114.9 46.1 -66.2 -40.6 2.4 -10.0 3.1 32 454 A L H X S+ 0 0 0 -4,-1.9 4,-2.6 2,-0.2 5,-0.4 0.996 116.3 40.7 -65.4 -65.9 1.7 -6.4 4.1 33 455 A Y H X S+ 0 0 91 -4,-2.0 4,-1.2 1,-0.2 7,-0.2 0.925 118.6 48.3 -48.2 -53.3 3.8 -4.6 1.6 34 456 A Q H < S+ 0 0 132 -4,-2.0 4,-0.4 -5,-0.3 -1,-0.2 0.939 113.7 47.2 -54.1 -52.0 2.8 -7.0 -1.2 35 457 A L H >< S+ 0 0 67 -4,-2.3 3,-1.4 -5,-0.3 -2,-0.2 0.980 120.3 35.4 -54.0 -66.0 -0.9 -6.7 -0.3 36 458 A F H >X S+ 0 0 5 -4,-2.6 3,-2.7 1,-0.3 4,-1.1 0.591 92.1 100.7 -66.0 -8.7 -1.0 -2.9 -0.1 37 459 A S T 3< + 0 0 59 -4,-1.2 -1,-0.3 -5,-0.4 -2,-0.2 0.820 59.7 81.4 -45.7 -34.7 1.5 -3.0 -2.9 38 460 A A T <4 S+ 0 0 92 -3,-1.4 -1,-0.3 -4,-0.4 -2,-0.1 0.836 101.4 35.5 -40.5 -40.7 -1.5 -2.2 -5.2 39 461 A F T <4 S- 0 0 57 -3,-2.7 2,-0.3 1,-0.3 -1,-0.2 0.922 113.1-129.6 -81.6 -49.6 -1.0 1.4 -4.1 40 462 A G < + 0 0 30 -4,-1.1 -1,-0.3 -7,-0.2 -2,-0.1 -0.957 62.0 21.4 136.1-154.7 2.8 1.4 -3.9 41 463 A N S S+ 0 0 177 -2,-0.3 2,-0.3 -4,-0.0 -8,-0.0 -0.256 71.7 164.4 -52.3 126.2 5.5 2.5 -1.4 42 464 A I - 0 0 18 14,-0.1 2,-0.6 15,-0.0 14,-0.1 -0.849 40.3-112.2-139.1 174.5 4.0 2.7 2.0 43 465 A Q - 0 0 119 12,-0.6 2,-0.6 -2,-0.3 12,-0.3 -0.890 26.8-164.3-117.3 101.5 5.0 2.8 5.7 44 466 A I - 0 0 10 -2,-0.6 2,-0.6 10,-0.1 10,-0.2 -0.751 5.5-161.3 -88.4 118.6 4.1 -0.3 7.7 45 467 A S E -C 53 0A 63 8,-1.8 8,-2.1 -2,-0.6 2,-0.8 -0.882 9.1-145.0-104.3 122.6 4.2 0.2 11.5 46 468 A W E +C 52 0A 121 -2,-0.6 6,-0.2 6,-0.2 3,-0.1 -0.759 31.0 159.0 -89.2 108.5 4.4 -2.9 13.7 47 469 A I E - 0 0 81 4,-2.0 2,-0.2 -2,-0.8 5,-0.2 0.924 61.9 -10.4 -90.6 -66.2 2.5 -2.3 16.9 48 470 A D E > S-C 51 0A 95 3,-1.8 3,-0.5 1,-0.0 -1,-0.3 -0.621 82.6 -81.6-125.5-175.0 1.7 -5.7 18.3 49 471 A D T 3 S+ 0 0 94 1,-0.3 3,-0.0 -2,-0.2 -26,-0.0 0.826 134.5 14.2 -59.0 -32.1 1.9 -9.4 17.3 50 472 A T T 3 S+ 0 0 52 -26,-0.1 2,-0.5 -28,-0.1 -1,-0.3 0.083 113.7 92.0-130.3 20.7 -1.4 -8.9 15.4 51 473 A S E < + C 0 48A 22 -3,-0.5 -4,-2.0 -29,-0.2 -3,-1.8 -0.975 45.4 155.9-123.9 123.7 -1.6 -5.1 15.4 52 474 A A E -AC 21 46A 0 -31,-1.5 -31,-1.3 -2,-0.5 2,-0.3 -0.937 26.9-138.2-141.2 163.0 -0.2 -3.0 12.6 53 475 A F E -AC 20 45A 37 -8,-2.1 -8,-1.8 -2,-0.3 2,-0.4 -0.915 9.7-154.3-125.1 151.3 -0.8 0.4 11.0 54 476 A V E -A 19 0A 1 -35,-1.6 -35,-2.0 -2,-0.3 2,-0.4 -0.969 2.1-158.3-127.6 141.8 -0.9 1.6 7.4 55 477 A S E -A 18 0A 45 -2,-0.4 -12,-0.6 -12,-0.3 2,-0.2 -0.973 11.8-175.8-122.9 129.4 -0.2 5.1 5.9 56 478 A L - 0 0 23 -39,-0.6 -39,-0.1 -2,-0.4 -14,-0.1 -0.671 27.2-136.1-116.1 172.0 -1.5 6.3 2.6 57 479 A S S S+ 0 0 126 -2,-0.2 -1,-0.1 1,-0.2 -40,-0.1 0.875 87.7 32.6 -93.2 -48.8 -1.0 9.5 0.5 58 480 A Q > - 0 0 89 1,-0.1 4,-0.6 -41,-0.1 3,-0.2 -0.835 69.3-135.4-113.2 150.2 -4.5 10.2 -0.6 59 481 A P H >> S+ 0 0 77 0, 0.0 3,-0.8 0, 0.0 4,-0.8 0.814 99.0 71.5 -69.7 -31.8 -7.8 9.6 1.2 60 482 A E H >> S+ 0 0 136 1,-0.3 3,-1.2 2,-0.2 4,-0.8 0.923 90.2 59.0 -50.1 -51.0 -9.5 8.2 -1.9 61 483 A Q H 3> S+ 0 0 50 1,-0.3 4,-2.4 -3,-0.2 5,-0.3 0.865 91.2 72.4 -47.1 -41.3 -7.4 5.0 -1.7 62 484 A V H -B 19 0A 46 -2,-0.3 4,-2.6 -60,-0.2 -60,-0.2 -0.411 39.3-117.2 -71.9 145.9 -10.3 3.6 9.7 80 502 A Y H > S+ 0 0 57 -62,-1.2 4,-2.6 -65,-0.5 5,-0.3 0.913 117.5 48.6 -46.5 -51.8 -8.0 4.8 12.5 81 503 A A H > S+ 0 0 65 -66,-0.5 4,-3.0 1,-0.2 -1,-0.2 0.913 109.6 52.5 -56.5 -45.9 -11.0 6.5 14.2 82 504 A E H > S+ 0 0 75 2,-0.2 4,-0.9 1,-0.2 -1,-0.2 0.920 112.9 44.7 -57.1 -46.9 -13.1 3.4 13.8 83 505 A Y H >X S+ 0 0 48 -4,-2.6 3,-1.2 1,-0.2 4,-0.9 0.988 117.1 41.9 -61.6 -62.8 -10.4 1.3 15.5 84 506 A V H 3X S+ 0 0 27 -4,-2.6 4,-2.3 1,-0.3 3,-0.2 0.887 99.9 75.9 -52.4 -42.6 -9.6 3.7 18.4 85 507 A G H 3< S+ 0 0 29 -4,-3.0 -1,-0.3 -5,-0.3 -2,-0.2 0.848 94.6 50.3 -36.2 -49.6 -13.4 4.3 18.8 86 508 A K H << S+ 0 0 156 -3,-1.2 -1,-0.2 -4,-0.9 -2,-0.2 0.958 113.8 43.5 -56.9 -55.1 -13.7 0.9 20.5 87 509 A K H < S+ 0 0 140 -4,-0.9 2,-0.4 -3,-0.2 -2,-0.2 0.974 131.4 11.1 -54.9 -61.9 -10.8 1.6 22.9 88 510 A Q < - 0 0 148 -4,-2.3 2,-0.4 0, 0.0 -1,-0.2 -0.941 63.5-171.7-124.0 144.8 -11.8 5.2 23.8 89 511 A K - 0 0 183 -2,-0.4 -4,-0.0 -3,-0.1 -3,-0.0 -0.910 4.2-172.1-139.4 109.5 -15.0 7.1 23.0 90 512 A G - 0 0 80 -2,-0.4 2,-0.4 1,-0.1 -1,-0.1 0.647 52.6 -59.2 -68.3-129.1 -15.4 10.8 23.7 91 513 A K S S+ 0 0 209 2,-0.1 2,-0.3 0, 0.0 -1,-0.1 -0.745 90.2 102.9-127.3 84.2 -18.7 12.6 23.3 92 514 A Q S S- 0 0 154 -2,-0.4 -2,-0.0 0, 0.0 0, 0.0 -0.856 74.2 -95.7-165.2 125.4 -20.1 12.3 19.8 93 515 A V - 0 0 120 -2,-0.3 2,-0.3 1,-0.1 -2,-0.1 0.009 43.0-139.1 -39.4 142.0 -22.8 10.1 18.2 94 516 A K - 0 0 166 2,-0.0 2,-0.3 -9,-0.0 -1,-0.1 -0.803 18.7-172.8-110.9 152.8 -21.4 6.9 16.6 95 517 A S - 0 0 95 -2,-0.3 3,-0.1 0, 0.0 0, 0.0 -0.998 17.6-151.8-145.2 145.9 -22.4 5.3 13.3 96 518 A G + 0 0 30 -2,-0.3 4,-0.2 4,-0.2 -2,-0.0 -0.728 20.0 167.0-122.0 83.4 -21.5 2.0 11.6 97 519 A P + 0 0 119 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 0.550 68.8 60.3 -69.8 -6.8 -21.8 2.4 7.8 98 520 A S S S- 0 0 49 1,-0.1 -28,-0.0 -3,-0.1 0, 0.0 -0.688 115.0 -46.7-117.4 171.5 -19.9 -0.9 7.5 99 521 A S 0 0 96 -2,-0.2 -1,-0.1 1,-0.0 0, 0.0 -0.090 360.0 360.0 -39.2 108.3 -20.6 -4.5 8.6 100 522 A G 0 0 106 -4,-0.2 -4,-0.2 -3,-0.1 -1,-0.0 -0.945 360.0 360.0 125.3 360.0 -21.7 -3.9 12.2