==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-MAY-04 1WII . COMPND 2 MOLECULE: HYPOTHETICAL UPF0222 PROTEIN MGC4549; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR T.ABE,H.HIROTA,H.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7134.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 40 47.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 15.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 10.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 13 15.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 136 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-134.6 -47.4 -7.4 18.5 2 2 A S + 0 0 124 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.901 360.0 151.9-138.1 166.1 -45.4 -10.3 17.1 3 3 A S + 0 0 127 -2,-0.3 0, 0.0 2,-0.0 0, 0.0 -0.887 14.5 170.4 174.5 155.8 -42.3 -12.4 17.9 4 4 A G - 0 0 67 -2,-0.3 -1,-0.0 0, 0.0 0, 0.0 0.467 20.3-171.5-142.5 -56.6 -40.7 -15.8 17.5 5 5 A S + 0 0 117 1,-0.0 -2,-0.0 2,-0.0 0, 0.0 0.393 13.0 171.8 64.2 152.2 -37.1 -16.0 18.6 6 6 A S - 0 0 127 2,-0.0 2,-0.2 0, 0.0 -1,-0.0 0.298 19.1-160.0-157.4 -48.8 -34.9 -19.0 18.0 7 7 A G + 0 0 59 1,-0.2 -2,-0.0 0, 0.0 0, 0.0 -0.602 35.8 124.5 91.1-151.8 -31.3 -18.3 19.0 8 8 A R - 0 0 253 -2,-0.2 -1,-0.2 1,-0.1 -2,-0.0 0.656 29.3-174.2 61.5 131.4 -28.3 -20.3 17.7 9 9 A K - 0 0 196 2,-0.0 -1,-0.1 0, 0.0 0, 0.0 -0.640 10.9-151.3-162.0 96.2 -25.4 -18.5 16.0 10 10 A P - 0 0 111 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.343 31.4 -99.1 -69.8 148.4 -22.4 -20.3 14.4 11 11 A P - 0 0 117 0, 0.0 3,-0.1 0, 0.0 2,-0.0 -0.394 40.3-108.2 -69.8 141.8 -19.0 -18.6 14.2 12 12 A P - 0 0 120 0, 0.0 3,-0.1 0, 0.0 0, 0.0 -0.338 40.5 -92.8 -69.7 149.9 -18.0 -17.0 10.9 13 13 A K - 0 0 172 1,-0.1 2,-0.5 -2,-0.0 0, 0.0 -0.218 45.8 -99.6 -61.0 151.8 -15.3 -18.5 8.7 14 14 A K + 0 0 201 -3,-0.1 2,-0.2 1,-0.0 -1,-0.1 -0.630 55.8 151.8 -78.6 123.7 -11.7 -17.4 9.1 15 15 A K + 0 0 191 -2,-0.5 2,-0.2 -3,-0.1 -2,-0.0 -0.710 11.6 169.9-157.1 98.9 -10.7 -14.8 6.5 16 16 A M - 0 0 167 -2,-0.2 2,-0.6 2,-0.0 -2,-0.0 -0.551 34.5-110.3-105.3 172.3 -8.0 -12.2 7.2 17 17 A T - 0 0 121 -2,-0.2 2,-1.2 0, 0.0 -2,-0.0 -0.913 19.7-147.9-109.2 117.8 -6.2 -9.8 4.9 18 18 A G - 0 0 44 -2,-0.6 3,-0.1 3,-0.0 2,-0.0 -0.691 25.6-177.3 -86.8 95.9 -2.5 -10.4 4.3 19 19 A T + 0 0 81 -2,-1.2 5,-0.1 1,-0.2 49,-0.0 -0.171 53.2 63.4 -82.3 179.9 -1.0 -6.9 3.8 20 20 A L + 0 0 100 3,-0.2 -1,-0.2 1,-0.1 4,-0.1 0.855 63.3 127.0 71.8 36.0 2.6 -6.0 2.9 21 21 A E S S- 0 0 87 2,-0.4 -1,-0.1 -3,-0.1 3,-0.1 -0.130 82.1-112.5-114.3 35.0 2.4 -7.8 -0.4 22 22 A T S S+ 0 0 68 1,-0.1 2,-0.4 14,-0.1 15,-0.3 0.734 90.8 106.0 41.0 24.2 3.6 -4.8 -2.5 23 23 A Q + 0 0 65 13,-0.2 -2,-0.4 11,-0.1 2,-0.3 -0.996 40.4 156.2-135.6 138.1 0.0 -4.9 -3.8 24 24 A F - 0 0 17 -2,-0.4 10,-1.2 11,-0.3 2,-0.1 -0.987 43.1 -88.8-155.5 158.9 -2.9 -2.6 -3.1 25 25 A T - 0 0 54 -2,-0.3 8,-0.1 8,-0.2 3,-0.0 -0.369 37.1-130.0 -70.7 149.2 -6.2 -1.4 -4.6 26 26 A C > - 0 0 0 6,-0.2 4,-1.3 1,-0.1 6,-0.1 -0.898 11.0-163.1-107.4 117.5 -6.3 1.6 -6.9 27 27 A P T 4 S+ 0 0 48 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.636 89.9 61.4 -69.8 -14.1 -8.8 4.3 -6.2 28 28 A F T 4 S- 0 0 76 -3,-0.0 -3,-0.0 1,-0.0 -2,-0.0 0.943 133.8 -6.5 -77.6 -52.0 -8.3 5.6 -9.7 29 29 A C T 4 S- 0 0 43 -3,-0.0 -4,-0.0 0, 0.0 -1,-0.0 0.677 84.8-144.0-113.8 -34.0 -9.4 2.5 -11.7 30 30 A N < + 0 0 94 -4,-1.3 3,-0.1 1,-0.1 -5,-0.1 0.995 38.5 154.0 63.0 79.1 -10.0 0.0 -8.9 31 31 A H - 0 0 119 1,-0.4 -1,-0.1 3,-0.0 -6,-0.0 -0.136 53.2-111.5-127.5 36.3 -8.9 -3.3 -10.4 32 32 A E S S+ 0 0 134 -6,-0.1 -1,-0.4 2,-0.1 -8,-0.2 0.066 87.1 7.1 59.0-177.1 -7.9 -5.2 -7.3 33 33 A K S S+ 0 0 110 1,-0.2 -8,-0.2 -10,-0.1 -1,-0.1 -0.005 88.7 124.6 -34.0 92.0 -4.2 -6.1 -6.5 34 34 A S + 0 0 19 -10,-1.2 17,-2.6 15,-0.1 2,-0.3 -0.139 43.8 84.6-153.0 44.8 -2.8 -4.1 -9.4 35 35 A C E -A 50 0A 3 15,-0.3 2,-0.4 16,-0.1 -11,-0.3 -0.996 55.2-147.5-151.2 145.6 -0.2 -1.7 -7.9 36 36 A D E -A 49 0A 78 13,-1.2 13,-1.0 -2,-0.3 2,-0.6 -0.958 10.0-148.3-119.5 131.6 3.5 -1.8 -6.8 37 37 A V E -A 48 0A 8 -2,-0.4 2,-0.8 -15,-0.3 11,-0.2 -0.866 7.2-156.2-101.7 120.8 5.0 0.1 -4.0 38 38 A K E -A 47 0A 144 9,-2.9 9,-2.4 -2,-0.6 2,-1.1 -0.841 3.6-162.5 -99.3 108.2 8.6 1.2 -4.3 39 39 A M E -A 46 0A 61 -2,-0.8 2,-0.9 7,-0.2 7,-0.2 -0.751 7.9-172.5 -92.9 95.8 10.2 1.8 -1.0 40 40 A D E >> +A 45 0A 72 -2,-1.1 5,-2.1 5,-1.0 4,-0.6 -0.784 10.8 173.7 -92.9 104.3 13.3 3.9 -1.7 41 41 A R T >45S+ 0 0 149 -2,-0.9 3,-0.7 3,-0.2 -1,-0.2 0.963 74.6 62.9 -72.5 -54.8 15.4 4.2 1.5 42 42 A A T 345S+ 0 0 88 1,-0.3 -1,-0.2 2,-0.1 -2,-0.1 0.825 123.9 23.2 -38.2 -40.8 18.4 6.0 0.1 43 43 A R T 345S- 0 0 191 2,-0.1 -1,-0.3 19,-0.0 -2,-0.2 0.490 102.2-134.7-105.1 -8.7 16.0 8.8 -0.8 44 44 A N T <<5 + 0 0 66 -3,-0.7 17,-2.2 -4,-0.6 2,-0.4 0.917 62.8 127.1 53.6 47.5 13.5 7.9 1.9 45 45 A T E < -AB 40 60A 41 -5,-2.1 -5,-1.0 15,-0.3 2,-0.5 -0.936 50.5-148.6-140.0 114.2 10.6 8.3 -0.6 46 46 A G E -AB 39 59A 0 13,-2.5 13,-1.2 -2,-0.4 2,-0.5 -0.710 13.5-166.2 -85.9 122.7 8.0 5.8 -1.3 47 47 A V E -AB 38 58A 32 -9,-2.4 -9,-2.9 -2,-0.5 11,-0.2 -0.935 3.4-164.4-113.0 120.9 6.6 5.8 -4.9 48 48 A I E -AB 37 57A 0 9,-2.1 9,-2.7 -2,-0.5 2,-0.3 -0.634 8.3-179.9-100.3 159.7 3.5 3.9 -5.7 49 49 A S E -AB 36 56A 39 -13,-1.0 -13,-1.2 7,-0.3 7,-0.3 -0.979 19.3-125.6-153.7 161.7 2.1 2.9 -9.2 50 50 A C E -A 35 0A 11 5,-2.2 -15,-0.3 -2,-0.3 -25,-0.1 -0.681 2.6-151.1-109.6 164.6 -0.8 1.1 -10.8 51 51 A T S S+ 0 0 84 -17,-2.6 -16,-0.1 -2,-0.2 -1,-0.0 -0.132 91.8 35.8-125.9 36.1 -0.9 -1.8 -13.3 52 52 A V S S+ 0 0 64 -18,-0.2 -17,-0.1 3,-0.0 -2,-0.0 0.390 124.9 29.0-150.4 -44.2 -4.1 -0.9 -15.2 53 53 A C S S- 0 0 44 2,-0.0 -2,-0.1 0, 0.0 0, 0.0 0.500 100.8-121.0-103.4 -9.1 -4.5 2.8 -15.5 54 54 A L + 0 0 154 1,-0.2 2,-0.2 0, 0.0 -3,-0.1 0.984 55.8 155.7 66.4 60.0 -0.8 3.6 -15.6 55 55 A E - 0 0 76 2,-0.0 -5,-2.2 0, 0.0 2,-0.3 -0.727 21.2-174.4-114.8 165.2 -0.7 5.8 -12.5 56 56 A E E -B 49 0A 115 -7,-0.3 2,-0.3 -2,-0.2 -7,-0.3 -0.986 4.0-173.0-158.6 148.9 2.1 6.8 -10.1 57 57 A F E -B 48 0A 32 -9,-2.7 -9,-2.1 -2,-0.3 2,-0.4 -0.995 11.5-146.0-146.3 149.2 2.6 8.8 -6.9 58 58 A Q E +B 47 0A 113 -2,-0.3 -11,-0.2 -11,-0.2 25,-0.1 -0.906 21.5 163.6-118.7 146.0 5.5 9.9 -4.7 59 59 A T E -B 46 0A 16 -13,-1.2 -13,-2.5 -2,-0.4 2,-0.2 -0.968 39.6-102.8-161.0 142.6 5.6 10.3 -0.9 60 60 A P E +B 45 0A 100 0, 0.0 -15,-0.3 0, 0.0 2,-0.2 -0.483 49.1 162.3 -69.7 129.3 8.3 10.7 1.8 61 61 A I - 0 0 11 -17,-2.2 2,-0.2 -2,-0.2 3,-0.0 -0.719 20.4-150.7-135.2-174.7 8.9 7.5 3.9 62 62 A T - 0 0 58 -2,-0.2 -19,-0.0 1,-0.0 -21,-0.0 -0.825 40.7 -84.4-147.8-174.6 11.4 5.9 6.2 63 63 A Y S S+ 0 0 158 -2,-0.2 -1,-0.0 1,-0.2 -22,-0.0 0.877 126.9 48.0 -66.7 -38.6 12.7 2.6 7.4 64 64 A L S S+ 0 0 138 2,-0.1 -1,-0.2 -3,-0.0 -3,-0.0 0.883 93.9 95.9 -69.5 -39.4 9.9 2.2 10.0 65 65 A S - 0 0 45 1,-0.1 -4,-0.1 2,-0.1 -26,-0.0 0.075 68.6-137.1 -46.2 163.7 7.3 3.1 7.4 66 66 A E >> - 0 0 86 1,-0.0 4,-1.4 0, 0.0 3,-0.6 -0.894 19.4-118.1-129.2 158.8 5.5 0.2 5.6 67 67 A P T 34 S+ 0 0 18 0, 0.0 4,-0.4 0, 0.0 -46,-0.1 0.580 115.0 56.9 -69.7 -9.2 4.4 -0.6 2.0 68 68 A V T 3> S+ 0 0 38 2,-0.1 4,-1.1 3,-0.1 -3,-0.0 0.741 100.7 55.1 -92.3 -28.2 0.8 -0.6 3.3 69 69 A D H <> S+ 0 0 91 -3,-0.6 4,-2.0 1,-0.2 3,-0.4 0.944 98.1 60.8 -69.8 -49.8 0.9 2.9 4.7 70 70 A V H X S+ 0 0 2 -4,-1.4 4,-2.5 1,-0.2 -1,-0.2 0.861 100.5 58.2 -44.9 -42.1 1.9 4.6 1.5 71 71 A Y H > S+ 0 0 53 -4,-0.4 4,-1.3 2,-0.2 -1,-0.2 0.950 105.3 47.5 -54.9 -54.3 -1.2 3.3 -0.1 72 72 A S H >X S+ 0 0 75 -4,-1.1 4,-1.5 -3,-0.4 3,-0.9 0.934 110.8 51.8 -53.5 -51.3 -3.5 5.0 2.4 73 73 A D H 3X S+ 0 0 79 -4,-2.0 4,-2.9 1,-0.3 5,-0.2 0.912 103.0 59.0 -52.8 -46.9 -1.6 8.3 2.0 74 74 A W H 3X S+ 0 0 8 -4,-2.5 4,-1.1 -5,-0.2 -1,-0.3 0.842 104.1 54.5 -52.2 -35.7 -2.0 8.1 -1.7 75 75 A I H XX S+ 0 0 44 -4,-1.3 4,-2.9 -3,-0.9 3,-1.5 0.995 112.9 36.8 -62.5 -66.2 -5.8 8.1 -1.2 76 76 A D H 3X S+ 0 0 99 -4,-1.5 4,-1.5 1,-0.3 -2,-0.2 0.821 113.3 61.4 -56.8 -31.9 -6.1 11.2 0.9 77 77 A A H 3X S+ 0 0 20 -4,-2.9 4,-0.7 -5,-0.3 -1,-0.3 0.788 113.9 34.7 -65.9 -27.7 -3.4 12.7 -1.2 78 78 A C H << S+ 0 0 71 -3,-1.5 3,-0.4 -4,-1.1 -2,-0.2 0.895 119.0 46.3 -91.3 -52.1 -5.7 12.3 -4.2 79 79 A E H < S- 0 0 128 -4,-2.9 -3,-0.2 1,-0.2 -2,-0.2 0.706 146.0 -15.1 -64.2 -19.1 -9.1 12.9 -2.7 80 80 A S H < S+ 0 0 90 -4,-1.5 -1,-0.2 -5,-0.4 -2,-0.2 -0.203 115.5 74.1 173.9 83.4 -7.6 16.0 -1.0 81 81 A G < - 0 0 29 -4,-0.7 2,-0.8 -3,-0.4 -2,-0.1 0.142 49.9-164.0 162.3 66.3 -3.8 16.4 -0.8 82 82 A P - 0 0 129 0, 0.0 2,-0.1 0, 0.0 -4,-0.1 -0.534 19.0-149.8 -69.8 104.0 -1.9 17.5 -4.0 83 83 A S - 0 0 73 -2,-0.8 -2,-0.1 -6,-0.2 -25,-0.0 -0.450 16.9-173.9 -75.9 147.7 1.7 16.7 -3.2 84 84 A S 0 0 128 -2,-0.1 -1,-0.1 0, 0.0 0, 0.0 0.815 360.0 360.0-105.7 -55.7 4.4 18.9 -4.8 85 85 A G 0 0 117 -27,-0.0 -26,-0.0 -25,-0.0 -2,-0.0 0.430 360.0 360.0 111.4 360.0 7.8 17.3 -3.9