==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 28-MAY-04 1WIK . COMPND 2 MOLECULE: THIOREDOXIN-LIKE PROTEIN 2; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR K.MIYAMOTO,T.TOMIZAWA,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA, . 109 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7165.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 66 60.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 5.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 7.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 4.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 29.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 2 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 127 0, 0.0 2,-1.1 0, 0.0 60,-0.0 0.000 360.0 360.0 360.0 109.3 2.0 -2.7 -21.4 2 2 A S - 0 0 70 55,-0.2 2,-0.2 1,-0.1 59,-0.0 -0.484 360.0-130.9 -65.4 98.0 1.7 1.1 -21.5 3 3 A S S S+ 0 0 119 -2,-1.1 2,-0.1 3,-0.0 -1,-0.1 -0.342 74.1 55.8 -55.1 114.1 4.9 2.0 -23.3 4 4 A G S S+ 0 0 41 -2,-0.2 -2,-0.0 53,-0.0 0, 0.0 -0.108 86.7 36.0 128.6 134.2 6.5 4.7 -21.1 5 5 A S - 0 0 79 1,-0.2 2,-0.7 -2,-0.1 -3,-0.1 0.980 61.0-168.5 60.9 86.3 7.5 5.1 -17.5 6 6 A S + 0 0 122 1,-0.1 -1,-0.2 2,-0.0 -3,-0.0 -0.853 48.3 96.4-110.8 95.5 8.9 1.7 -16.5 7 7 A G > + 0 0 27 -2,-0.7 4,-0.5 2,-0.0 -1,-0.1 -0.141 30.1 125.8-176.8 65.7 9.3 1.6 -12.7 8 8 A L H > S+ 0 0 26 2,-0.2 4,-2.6 3,-0.1 5,-0.4 0.902 75.8 51.0 -92.5 -60.0 6.4 0.0 -10.8 9 9 A K H > S+ 0 0 122 1,-0.3 4,-1.5 2,-0.2 5,-0.1 0.892 110.5 53.3 -43.6 -49.0 8.1 -2.7 -8.8 10 10 A V H 4 S+ 0 0 82 2,-0.2 3,-0.3 1,-0.2 -1,-0.3 0.921 108.0 50.5 -53.2 -48.5 10.6 -0.0 -7.6 11 11 A L H >X S+ 0 0 16 -4,-0.5 3,-2.2 -3,-0.4 4,-0.6 0.953 113.0 43.9 -54.2 -55.4 7.7 2.2 -6.6 12 12 A T H 3< S+ 0 0 8 -4,-2.6 -1,-0.3 1,-0.3 6,-0.3 0.672 120.4 44.7 -64.0 -16.8 6.1 -0.7 -4.6 13 13 A N T 3< S+ 0 0 90 -4,-1.5 -1,-0.3 -5,-0.4 -2,-0.2 -0.025 88.5 95.8-115.2 25.9 9.6 -1.3 -3.4 14 14 A K T <4 S+ 0 0 127 -3,-2.2 2,-0.3 1,-0.2 -2,-0.2 0.957 91.5 20.0 -78.7 -57.2 10.4 2.3 -2.7 15 15 A A S < S- 0 0 23 -4,-0.6 -1,-0.2 1,-0.1 3,-0.2 -0.841 85.5-108.6-115.6 152.8 9.6 2.4 1.0 16 16 A S S S+ 0 0 92 -2,-0.3 2,-0.6 1,-0.2 61,-0.3 0.889 114.9 29.1 -40.6 -52.9 9.3 -0.5 3.5 17 17 A V E S-a 47 0A 1 29,-0.6 31,-2.7 59,-0.1 2,-0.4 -0.952 80.8-164.7-118.3 112.9 5.6 -0.0 3.5 18 18 A M E -aB 48 75A 0 57,-1.1 57,-1.0 -2,-0.6 2,-0.4 -0.773 7.0-175.6 -99.0 141.0 4.0 1.3 0.4 19 19 A L E -aB 49 74A 0 29,-1.3 31,-1.0 -2,-0.4 2,-0.5 -0.890 5.6-165.7-139.8 105.0 0.5 2.7 0.3 20 20 A F E +aB 50 73A 0 53,-1.5 53,-1.0 -2,-0.4 2,-0.3 -0.803 28.7 132.9 -95.3 127.2 -1.0 3.8 -3.1 21 21 A M E -a 51 0A 4 29,-1.2 2,-0.7 -2,-0.5 31,-0.6 -0.969 59.7 -82.7-161.5 169.6 -4.2 5.8 -3.0 22 22 A K S S+ 0 0 114 -2,-0.3 29,-0.1 1,-0.2 11,-0.1 -0.751 115.4 13.4 -86.5 113.4 -5.9 8.9 -4.4 23 23 A G S > S- 0 0 18 -2,-0.7 4,-3.1 5,-0.1 3,-0.3 -0.099 95.8-143.9 114.8 -31.9 -4.7 12.0 -2.4 24 24 A N T >4 - 0 0 27 26,-0.2 3,-0.9 2,-0.2 -4,-0.1 0.220 54.6 -45.8 56.0 171.4 -1.8 10.3 -0.7 25 25 A K T 34 S+ 0 0 110 1,-0.3 -1,-0.2 -6,-0.2 3,-0.1 0.778 140.6 67.5 -39.0 -30.8 -0.9 11.2 2.9 26 26 A Q T 34 S+ 0 0 175 -3,-0.3 2,-0.4 1,-0.2 -1,-0.3 0.976 112.4 19.5 -55.3 -63.1 -1.3 14.7 1.5 27 27 A E << + 0 0 145 -4,-3.1 2,-0.3 -3,-0.9 -1,-0.2 -0.877 67.3 169.1-114.2 145.5 -5.1 14.4 1.0 28 28 A A - 0 0 37 -2,-0.4 -5,-0.1 1,-0.2 4,-0.1 -0.883 30.6-145.0-158.3 121.3 -7.4 11.9 2.6 29 29 A K - 0 0 172 -2,-0.3 -1,-0.2 2,-0.2 3,-0.1 0.956 54.8-101.9 -47.2 -65.1 -11.2 11.9 2.6 30 30 A C S S+ 0 0 93 1,-0.6 2,-0.3 0, 0.0 -1,-0.1 -0.056 91.8 41.0 167.2 -42.9 -11.4 10.4 6.1 31 31 A G S > S+ 0 0 37 3,-0.2 2,-3.6 4,-0.1 -1,-0.6 -0.785 109.7 13.2-124.8 168.2 -12.2 6.7 5.7 32 32 A F T 3> S+ 0 0 144 1,-0.3 4,-1.3 -2,-0.3 5,-0.1 -0.325 133.5 40.5 67.7 -65.2 -11.1 3.9 3.4 33 33 A S H 3> S+ 0 0 19 -2,-3.6 4,-1.3 2,-0.2 -1,-0.3 0.953 125.7 33.9 -75.8 -54.3 -8.2 6.0 2.1 34 34 A K H <> S+ 0 0 84 -3,-0.5 4,-3.6 2,-0.2 5,-0.3 0.827 112.2 68.2 -69.7 -32.8 -7.2 7.5 5.4 35 35 A Q H > S+ 0 0 67 2,-0.2 4,-2.5 1,-0.2 5,-0.2 0.966 100.1 43.0 -48.2 -73.8 -8.2 4.3 7.1 36 36 A I H X S+ 0 0 0 -4,-1.3 4,-4.3 1,-0.2 5,-0.3 0.876 116.9 51.8 -39.4 -50.0 -5.5 2.1 5.7 37 37 A L H X S+ 0 0 9 -4,-1.3 4,-2.9 2,-0.3 5,-0.4 0.977 105.7 50.5 -51.7 -68.6 -3.1 4.9 6.4 38 38 A E H X S+ 0 0 90 -4,-3.6 4,-4.1 1,-0.3 -1,-0.2 0.815 117.6 43.9 -38.7 -38.9 -4.1 5.4 10.0 39 39 A I H X S+ 0 0 6 -4,-2.5 4,-2.2 -5,-0.3 -1,-0.3 0.942 109.5 52.7 -73.5 -50.6 -3.5 1.7 10.2 40 40 A L H < S+ 0 0 0 -4,-4.3 4,-0.3 -5,-0.2 5,-0.3 0.759 121.8 36.1 -55.9 -24.6 -0.3 1.7 8.3 41 41 A N H >< S+ 0 0 89 -4,-2.9 3,-2.0 -5,-0.3 -2,-0.2 0.874 106.3 63.2 -93.1 -50.5 0.7 4.3 10.7 42 42 A S H 3< S+ 0 0 74 -4,-4.1 -2,-0.2 -5,-0.4 -3,-0.2 0.795 95.3 67.3 -44.0 -32.1 -0.9 3.0 13.9 43 43 A T T 3< S- 0 0 31 -4,-2.2 -1,-0.3 -5,-0.1 -2,-0.2 0.915 102.2-135.2 -55.9 -47.1 1.4 0.1 13.4 44 44 A G < + 0 0 62 -3,-2.0 -2,-0.1 -4,-0.3 -3,-0.1 0.251 64.5 118.3 106.1 -8.5 4.4 2.3 14.1 45 45 A V S S- 0 0 14 -5,-0.3 2,-0.4 1,-0.1 -1,-0.3 0.019 72.2 -87.4 -75.6-171.5 6.4 1.0 11.2 46 46 A E + 0 0 157 -3,-0.1 -29,-0.6 55,-0.1 2,-0.3 -0.881 55.1 149.9-107.3 134.5 7.7 3.0 8.3 47 47 A Y E -a 17 0A 35 -2,-0.4 2,-0.3 -31,-0.2 -29,-0.2 -0.913 22.9-154.1-150.9 174.7 5.6 3.6 5.2 48 48 A E E -a 18 0A 83 -31,-2.7 -29,-1.3 -2,-0.3 2,-0.3 -0.906 11.0-129.9-147.9 173.1 5.0 6.0 2.4 49 49 A T E -a 19 0A 18 -2,-0.3 2,-0.3 -31,-0.2 -29,-0.2 -0.839 15.3-164.8-127.4 164.5 2.3 7.1 -0.1 50 50 A F E -a 20 0A 23 -31,-1.0 -29,-1.2 -2,-0.3 2,-0.5 -0.954 25.6-106.6-146.3 162.7 2.1 7.7 -3.8 51 51 A D E +a 21 0A 42 -2,-0.3 4,-0.2 1,-0.1 -29,-0.1 -0.814 26.9 174.0 -96.3 129.2 -0.1 9.4 -6.4 52 52 A I S S+ 0 0 8 -31,-0.6 7,-0.5 -2,-0.5 -1,-0.1 0.587 81.3 49.6-104.4 -18.8 -2.1 7.1 -8.7 53 53 A L S S+ 0 0 97 -32,-0.2 3,-0.4 1,-0.1 6,-0.1 0.958 106.3 50.2 -82.5 -63.7 -4.0 9.9 -10.4 54 54 A E S S+ 0 0 172 1,-0.3 2,-0.9 2,-0.1 3,-0.2 0.856 118.0 44.9 -41.4 -44.8 -1.2 12.2 -11.4 55 55 A D > + 0 0 57 -4,-0.2 4,-2.1 1,-0.2 3,-0.4 -0.723 69.7 169.9-106.1 80.1 0.5 9.2 -12.9 56 56 A E H >>S+ 0 0 129 -2,-0.9 4,-1.7 -3,-0.4 5,-0.5 0.937 75.9 61.3 -53.1 -52.9 -2.4 7.5 -14.7 57 57 A E H >5S+ 0 0 85 1,-0.3 4,-2.6 2,-0.2 -1,-0.2 0.866 107.6 45.5 -40.7 -47.5 0.0 5.1 -16.4 58 58 A V H >5S+ 0 0 8 -3,-0.4 4,-3.2 2,-0.2 5,-0.3 0.919 103.9 64.9 -64.0 -45.4 0.9 3.8 -13.0 59 59 A R H X5S+ 0 0 90 -4,-2.1 4,-2.1 -7,-0.5 3,-0.4 0.918 119.4 22.0 -40.2 -66.0 -2.7 3.7 -12.0 60 60 A Q H X5S+ 0 0 79 -4,-1.7 4,-3.1 1,-0.2 -1,-0.3 0.804 118.7 66.0 -74.1 -31.0 -3.5 1.0 -14.5 61 61 A G H <X>S+ 0 0 0 -4,-3.2 4,-4.3 -3,-0.4 3,-1.5 0.934 116.3 47.4 -86.0 -59.0 -0.3 -1.1 -11.0 63 63 A K H 3X5S+ 0 0 68 -4,-2.1 4,-2.4 -5,-0.3 5,-0.4 0.861 114.4 50.7 -49.9 -39.1 -3.8 -2.6 -11.0 64 64 A T H 3<5S+ 0 0 93 -4,-3.1 -1,-0.3 2,-0.2 -2,-0.2 0.737 117.4 40.5 -71.0 -23.6 -2.7 -4.4 -14.2 65 65 A F H <45S+ 0 0 118 -3,-1.5 -2,-0.2 -5,-0.2 -1,-0.2 0.895 126.1 31.6 -88.9 -50.1 0.4 -5.6 -12.3 66 66 A S H <5S- 0 0 19 -4,-4.3 -3,-0.2 2,-0.1 -2,-0.2 0.791 97.4-137.8 -77.6 -30.2 -1.2 -6.4 -8.9 67 67 A N S <> - 0 0 2 -2,-0.3 4,-3.6 -10,-0.2 3,-0.9 -0.390 63.5 -78.1-101.7-179.1 -6.4 -4.0 0.1 84 84 A L H 3>>S+ 0 0 27 1,-0.3 4,-3.3 -12,-0.3 5,-0.6 0.919 132.5 54.5 -41.8 -59.8 -7.7 -2.2 3.1 85 85 A D H 3>5S+ 0 0 119 1,-0.2 4,-1.2 2,-0.2 -1,-0.3 0.859 118.2 37.9 -43.1 -42.5 -10.2 -5.1 3.7 86 86 A I H <>5S+ 0 0 49 -3,-0.9 4,-2.0 2,-0.2 -2,-0.2 0.983 117.8 46.9 -73.4 -63.1 -7.1 -7.3 3.6 87 87 A V H X5S+ 0 0 0 -4,-3.6 4,-2.3 1,-0.3 3,-0.2 0.926 114.2 48.1 -41.9 -62.9 -4.6 -5.0 5.4 88 88 A K H X5S+ 0 0 81 -4,-3.3 4,-4.3 1,-0.2 5,-0.3 0.884 106.4 61.0 -46.0 -45.5 -7.2 -4.3 8.2 89 89 A E H XS+ 0 0 47 -4,-2.0 4,-3.8 -3,-0.2 5,-1.5 0.969 117.4 47.8 -52.1 -62.4 -4.1 -8.8 9.3 91 91 A K H <5S+ 0 0 84 -4,-2.3 -2,-0.2 1,-0.2 -1,-0.2 0.923 113.1 48.8 -43.2 -58.9 -3.9 -5.8 11.6 92 92 A D H <5S+ 0 0 111 -4,-4.3 -1,-0.2 1,-0.3 -2,-0.2 0.933 113.5 46.1 -46.8 -56.4 -7.2 -6.8 13.2 93 93 A N H <5S- 0 0 112 -4,-3.4 -1,-0.3 -5,-0.3 -2,-0.2 0.887 118.3-118.5 -54.6 -41.6 -6.0 -10.4 13.6 94 94 A G T <5S+ 0 0 52 -4,-3.8 -3,-0.2 -5,-0.2 -2,-0.1 0.772 83.6 107.3 102.8 39.7 -2.7 -9.0 14.9 95 95 A E < + 0 0 124 -5,-1.5 -4,-0.2 -6,-0.1 -5,-0.1 -0.287 52.3 82.1-141.3 49.9 -0.3 -10.2 12.3 96 96 A L S > S+ 0 0 2 -6,-0.2 4,-3.6 -5,-0.2 3,-0.5 0.650 78.8 62.8-119.7 -40.2 0.7 -7.2 10.3 97 97 A L H > S+ 0 0 74 1,-0.3 4,-2.8 2,-0.2 5,-0.2 0.906 110.5 42.9 -53.8 -45.3 3.3 -5.5 12.4 98 98 A P H >>S+ 0 0 42 0, 0.0 4,-0.8 0, 0.0 5,-0.8 0.651 115.6 51.1 -75.0 -16.5 5.5 -8.6 11.9 99 99 A I H 45S+ 0 0 72 -3,-0.5 -2,-0.2 2,-0.1 -3,-0.1 0.807 115.0 40.7 -87.4 -35.3 4.5 -8.6 8.3 100 100 A L H <5S+ 0 0 6 -4,-3.6 -23,-0.2 1,-0.1 -3,-0.2 0.955 111.6 54.9 -76.2 -54.9 5.4 -5.0 7.8 101 101 A K H <5S- 0 0 143 -4,-2.8 -2,-0.1 -5,-0.3 -1,-0.1 0.928 103.2-131.8 -40.9 -68.3 8.6 -5.0 9.8 102 102 A G T <5 - 0 0 42 -4,-0.8 -3,-0.1 -5,-0.2 -2,-0.1 0.754 11.5-135.8 107.3 80.6 10.0 -7.9 7.8 103 103 A E < + 0 0 145 -5,-0.8 2,-0.3 0, 0.0 0, 0.0 -0.352 38.2 151.9 -64.6 141.4 11.5 -10.7 9.9 104 104 A S + 0 0 107 1,-0.4 0, 0.0 -2,-0.0 0, 0.0 -0.926 38.1 12.0-170.5 145.9 14.8 -12.0 8.7 105 105 A G S S- 0 0 66 -2,-0.3 -1,-0.4 2,-0.0 2,-0.0 0.265 90.8 -60.4 65.1 162.5 18.0 -13.7 10.1 106 106 A P - 0 0 123 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.303 35.9-159.6 -75.0 161.2 18.3 -15.1 13.6 107 107 A S S S+ 0 0 131 -2,-0.0 -2,-0.0 0, 0.0 0, 0.0 0.822 85.2 1.7-104.4 -58.8 17.9 -13.1 16.7 108 108 A S 0 0 125 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.883 360.0 360.0 -95.7 -58.5 19.7 -15.0 19.4 109 109 A G 0 0 105 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.312 360.0 360.0 126.9 360.0 21.1 -18.0 17.7