==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 09-JUN-09 2WKD . COMPND 2 MOLECULE: ORF34P2; . SOURCE 2 ORGANISM_SCIENTIFIC: LACTOCOCCUS PHAGE P2; . AUTHOR E.SCALTRITI,C.CAMBILLAU,M.ORTIZ-LOMBARDIA . 79 3 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5973.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 53.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 3.8 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 29 36.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A G 0 0 130 0, 0.0 2,-0.4 0, 0.0 61,-0.0 0.000 360.0 360.0 360.0 173.7 27.7 38.1 8.9 2 1 A T - 0 0 106 61,-0.1 2,-0.4 2,-0.0 61,-0.2 -0.973 360.0-173.5-121.3 130.6 26.9 39.9 5.7 3 2 A I - 0 0 103 -2,-0.4 2,-0.5 59,-0.1 59,-0.2 -0.985 7.7-159.5-122.2 127.2 26.1 38.2 2.4 4 3 A I E -A 61 0A 43 57,-2.5 57,-2.3 -2,-0.4 2,-0.5 -0.952 7.9-168.1-108.7 131.2 25.6 40.1 -0.8 5 4 A T E +A 60 0A 81 -2,-0.5 2,-0.4 55,-0.2 55,-0.3 -0.969 7.0 179.8-123.2 115.0 23.7 38.4 -3.6 6 5 A V E -A 59 0A 22 53,-3.3 53,-3.4 -2,-0.5 2,-0.5 -0.941 14.7-161.2-120.1 136.1 23.7 39.8 -7.2 7 6 A T E +A 58 0A 85 -2,-0.4 2,-0.3 51,-0.2 51,-0.2 -0.970 33.1 142.9-111.4 126.9 22.0 38.5 -10.3 8 7 A A E -A 57 0A 21 49,-2.2 49,-2.8 -2,-0.5 2,-0.4 -0.987 51.2-102.4-158.6 157.4 23.4 39.9 -13.5 9 8 A Q E -A 56 0A 98 -2,-0.3 2,-0.8 47,-0.2 47,-0.3 -0.766 33.8-129.7 -86.8 131.5 24.2 39.1 -17.1 10 9 A A + 0 0 0 45,-3.1 44,-3.6 -2,-0.4 2,-0.2 -0.735 52.3 143.6 -80.4 110.0 27.9 38.5 -17.8 11 10 A N >> - 0 0 36 -2,-0.8 4,-2.0 42,-0.2 3,-1.1 -0.779 66.6 -79.6-141.9-175.6 28.7 40.8 -20.8 12 11 A E T 34 S+ 0 0 158 1,-0.3 -2,-0.0 -2,-0.2 41,-0.0 0.776 122.2 56.2 -63.0 -26.3 31.1 43.1 -22.4 13 12 A K T 34 S+ 0 0 200 1,-0.1 -1,-0.3 3,-0.0 -3,-0.1 0.736 123.5 18.1 -76.4 -25.9 30.1 46.0 -20.1 14 13 A N T <4 S+ 0 0 36 -3,-1.1 15,-2.3 -5,-0.1 2,-0.4 0.436 112.0 70.1-129.4 -0.7 30.8 44.2 -16.8 15 14 A T E < +B 28 0A 9 -4,-2.0 2,-0.3 13,-0.2 13,-0.2 -0.975 47.7 178.4-129.3 135.7 33.1 41.2 -17.5 16 15 A R E -B 27 0A 176 11,-2.1 11,-2.7 -2,-0.4 2,-0.5 -0.958 24.6-132.4-129.5 151.1 36.8 40.9 -18.5 17 16 A T E +B 26 0A 77 -2,-0.3 2,-0.3 9,-0.2 9,-0.2 -0.932 33.4 177.3-103.7 125.5 39.1 37.9 -19.0 18 17 A V E -B 25 0A 30 7,-2.9 7,-2.4 -2,-0.5 2,-0.3 -0.863 32.8-110.0-124.8 154.6 42.4 38.2 -17.3 19 18 A S + 0 0 103 -2,-0.3 2,-0.3 5,-0.2 5,-0.2 -0.669 43.1 171.7 -79.4 139.7 45.5 36.1 -16.9 20 19 A T > - 0 0 45 -2,-0.3 3,-2.1 3,-0.3 0, 0.0 -0.898 52.7 -96.1-136.5 170.7 46.0 34.8 -13.3 21 20 A A T 3 S+ 0 0 109 1,-0.3 3,-0.1 -2,-0.3 -2,-0.0 0.629 129.2 52.4 -60.2 -15.1 48.3 32.3 -11.7 22 21 A K T 3 S- 0 0 175 1,-0.4 -1,-0.3 3,-0.0 2,-0.0 0.011 121.8-105.7-107.6 24.2 45.4 29.8 -12.2 23 22 A G S < S- 0 0 38 -3,-2.1 -1,-0.4 2,-0.1 -3,-0.3 -0.257 74.0 -3.9 82.6-172.5 45.1 30.6 -16.0 24 23 A D + 0 0 123 -5,-0.2 2,-0.4 -3,-0.1 -5,-0.2 -0.259 68.8 179.7 -51.6 128.6 42.4 32.7 -17.8 25 24 A K E -B 18 0A 47 -7,-2.4 -7,-2.9 2,-0.0 2,-0.4 -1.000 26.0-133.5-133.7 140.1 39.7 33.9 -15.5 26 25 A K E -B 17 0A 47 21,-0.4 21,-2.5 -2,-0.4 2,-0.4 -0.693 21.7-162.4 -76.9 136.7 36.6 35.9 -16.1 27 26 A I E -BC 16 46A 40 -11,-2.7 -11,-2.1 -2,-0.4 2,-0.3 -0.995 2.9-159.6-123.3 124.6 36.1 38.7 -13.5 28 27 A I E -BC 15 45A 0 17,-2.5 17,-1.9 -2,-0.4 2,-0.5 -0.775 5.2-152.8-101.6 147.1 32.7 40.3 -13.2 29 28 A S E + C 0 44A 44 -15,-2.3 15,-0.2 -2,-0.3 -2,-0.0 -0.985 21.6 177.9-121.5 117.0 32.0 43.7 -11.6 30 29 A V E - C 0 43A 1 13,-3.2 13,-3.4 -2,-0.5 2,-0.2 -0.918 33.1-103.7-125.0 147.8 28.5 44.1 -10.1 31 30 A P E - C 0 42A 53 0, 0.0 11,-0.3 0, 0.0 3,-0.1 -0.494 19.3-155.0 -71.8 133.7 26.7 47.0 -8.2 32 31 A L S S- 0 0 25 9,-2.9 2,-0.3 -2,-0.2 10,-0.1 0.530 73.6 -2.7 -84.5 -10.4 26.5 46.4 -4.4 33 32 A F S S- 0 0 105 8,-0.5 2,-0.2 2,-0.0 -1,-0.1 -0.965 72.2-106.8-166.1 174.1 23.4 48.7 -4.1 34 33 A E - 0 0 183 -2,-0.3 2,-0.3 -3,-0.1 -2,-0.0 -0.613 20.9-157.3-107.8 171.7 21.0 51.0 -5.9 35 34 A K 0 0 126 -2,-0.2 4,-0.0 5,-0.1 5,-0.0 -0.851 360.0 360.0-136.8 171.7 20.4 54.8 -6.1 36 35 A E 0 0 237 -2,-0.3 0, 0.0 2,-0.0 0, 0.0 -0.566 360.0 360.0 -74.2 360.0 17.5 57.2 -7.0 37 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 38 40 A V 0 0 153 0, 0.0 2,-0.3 0, 0.0 -2,-0.0 0.000 360.0 360.0 360.0 104.2 25.6 59.5 -5.4 39 41 A K - 0 0 181 1,-0.0 2,-0.4 -4,-0.0 0, 0.0 -0.617 360.0-127.5 -88.7 139.0 27.9 56.9 -7.0 40 42 A V - 0 0 23 -2,-0.3 2,-0.2 1,-0.0 -6,-0.1 -0.660 21.1-127.4 -83.9 131.8 27.2 53.1 -6.6 41 43 A A - 0 0 12 -2,-0.4 -9,-2.9 27,-0.0 -8,-0.5 -0.527 22.9-147.7 -75.3 146.1 30.0 50.9 -5.3 42 44 A Y E -C 31 0A 117 -11,-0.3 27,-0.6 -2,-0.2 2,-0.4 -0.934 5.1-154.5-120.2 137.8 30.9 47.8 -7.4 43 45 A G E -Cd 30 69A 0 -13,-3.4 -13,-3.2 -2,-0.4 2,-0.3 -0.875 9.4-144.3-110.2 148.1 32.2 44.4 -6.3 44 46 A S E +Cd 29 70A 29 25,-2.3 27,-2.5 -2,-0.4 2,-0.3 -0.852 17.5 176.9-111.7 146.6 34.3 42.0 -8.3 45 47 A A E -C 28 0A 4 -17,-1.9 -17,-2.5 -2,-0.3 2,-0.3 -0.996 30.0-117.7-146.1 143.2 34.2 38.2 -8.4 46 48 A F E -C 27 0A 117 -2,-0.3 -19,-0.2 -19,-0.2 -21,-0.0 -0.609 32.0-136.1 -77.0 137.7 36.0 35.4 -10.3 47 49 A X - 0 0 5 -21,-2.5 -21,-0.4 -2,-0.3 -1,-0.0 -0.725 20.3-107.4 -93.8 144.5 33.7 33.3 -12.5 48 50 A P > - 0 0 44 0, 0.0 3,-1.4 0, 0.0 -22,-0.1 -0.306 38.3-105.0 -61.4 156.9 33.9 29.5 -12.7 49 51 A D T 3 S+ 0 0 127 1,-0.3 -2,-0.0 -24,-0.0 -25,-0.0 0.775 115.2 61.1 -60.2 -30.6 35.4 28.1 -15.9 50 52 A F T 3 S+ 0 0 116 2,-0.1 -1,-0.3 0, 0.0 2,-0.1 0.715 79.1 105.3 -74.1 -20.1 32.0 26.9 -17.4 51 53 A I < - 0 0 1 -3,-1.4 2,-0.3 -25,-0.1 -25,-0.1 -0.377 55.3-162.8 -62.1 136.3 30.5 30.5 -17.3 52 54 A Q > - 0 0 132 -2,-0.1 3,-2.4 1,-0.0 -42,-0.2 -0.874 31.2 -86.3-121.4 152.6 30.2 32.0 -20.8 53 55 A X T 3 S+ 0 0 77 -2,-0.3 -42,-0.2 1,-0.3 3,-0.1 -0.361 118.2 31.0 -53.6 128.9 29.7 35.6 -22.1 54 56 A G T 3 S+ 0 0 33 -44,-3.6 -1,-0.3 1,-0.4 -43,-0.1 0.187 89.1 128.6 100.4 -15.0 26.0 36.2 -22.2 55 57 A D < - 0 0 25 -3,-2.4 -45,-3.1 -45,-0.2 2,-0.4 -0.404 57.3-131.4 -67.4 148.6 25.2 33.9 -19.2 56 58 A T E -AE 9 79A 35 23,-0.6 23,-3.0 -47,-0.3 2,-0.3 -0.885 34.6-175.8 -96.3 134.1 23.0 35.2 -16.4 57 59 A V E -AE 8 78A 1 -49,-2.8 -49,-2.2 -2,-0.4 2,-0.6 -0.933 28.1-137.7-131.1 154.7 24.6 34.4 -13.0 58 60 A T E -AE 7 77A 24 19,-2.7 19,-2.0 -2,-0.3 2,-0.6 -0.969 19.9-165.8-109.0 117.3 23.9 34.7 -9.3 59 61 A V E +AE 6 76A 1 -53,-3.4 -53,-3.3 -2,-0.6 2,-0.4 -0.929 14.6 173.2-104.6 120.9 27.0 35.9 -7.3 60 62 A S E +AE 5 75A 29 15,-2.6 15,-2.9 -2,-0.6 2,-0.3 -0.986 20.2 79.0-134.3 126.0 26.6 35.4 -3.5 61 63 A G E S-A 4 0A 7 -57,-2.3 -57,-2.5 -2,-0.4 12,-0.1 -0.946 72.6 -46.0 168.7-179.0 29.0 35.9 -0.6 62 64 A R E - E 0 72A 143 10,-0.7 10,-2.6 -2,-0.3 2,-0.4 -0.272 50.3-145.7 -60.3 149.7 30.8 38.1 1.8 63 65 A V E - E 0 71A 41 8,-0.3 2,-0.4 -61,-0.2 8,-0.2 -0.997 5.4-153.6-124.4 141.2 32.4 41.2 0.4 64 66 A Q E - E 0 70A 100 6,-2.9 6,-2.5 -2,-0.4 2,-0.4 -0.916 9.1-145.4-110.9 133.3 35.6 42.9 1.5 65 67 A A E E 0 69A 65 -2,-0.4 4,-0.2 4,-0.2 -22,-0.0 -0.822 360.0 360.0-104.1 137.8 36.4 46.6 1.1 66 68 A K 0 0 155 2,-3.0 -2,-0.0 -2,-0.4 0, 0.0 -0.995 360.0 360.0-126.1 360.0 39.9 48.2 0.4 67 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 68 75 A N 0 0 131 0, 0.0 -2,-3.0 0, 0.0 2,-0.5 0.000 360.0 360.0 360.0 137.5 37.8 48.4 -3.9 69 76 A Y E +dE 43 65A 92 -27,-0.6 -25,-2.3 -4,-0.2 2,-0.4 -0.972 360.0 179.7-125.6 120.0 35.2 45.7 -3.2 70 77 A N E -dE 44 64A 54 -6,-2.5 -6,-2.9 -2,-0.5 -25,-0.2 -0.965 27.7-122.5-122.7 137.9 35.9 42.0 -3.6 71 78 A F E - E 0 63A 17 -27,-2.5 2,-0.5 -2,-0.4 -8,-0.3 -0.478 25.6-142.0 -68.1 143.9 33.7 38.9 -3.0 72 79 A V E S- E 0 62A 36 -10,-2.6 -10,-0.7 1,-0.2 -1,-0.0 -0.965 74.7 -19.6-115.4 126.7 35.2 36.4 -0.6 73 80 A F E S- 0 0 186 -2,-0.5 -1,-0.2 -12,-0.1 -11,-0.1 0.881 91.1-166.1 41.7 50.1 34.7 32.7 -1.3 74 81 A P E - 0 0 43 0, 0.0 2,-0.5 0, 0.0 -13,-0.2 -0.254 19.9-135.3 -65.4 150.0 31.7 33.6 -3.5 75 82 A T E - E 0 60A 84 -15,-2.9 -15,-2.6 2,-0.0 2,-0.5 -0.899 22.9-165.8 -92.0 131.5 29.1 31.0 -4.8 76 83 A V E - E 0 59A 23 -2,-0.5 2,-0.4 -17,-0.2 -17,-0.2 -0.992 7.2-177.4-121.8 124.6 28.5 31.6 -8.4 77 84 A E E - E 0 58A 120 -19,-2.0 -19,-2.7 -2,-0.5 2,-0.4 -0.966 26.0-126.5-122.3 136.5 25.5 29.9 -10.0 78 85 A K E - E 0 57A 73 -2,-0.4 2,-0.4 -21,-0.2 -21,-0.2 -0.676 26.7-145.4 -74.3 134.0 24.3 29.9 -13.7 79 86 A V E - E 0 56A 52 -23,-3.0 -23,-0.6 -2,-0.4 2,-0.4 -0.863 9.6-145.3-103.9 136.1 20.7 31.0 -14.0 80 87 A F 0 0 162 -2,-0.4 -25,-0.0 1,-0.1 -23,-0.0 -0.843 360.0 360.0-108.5 139.7 18.4 29.5 -16.6 81 88 A I 0 0 191 -2,-0.4 -1,-0.1 -25,-0.0 0, 0.0 0.304 360.0 360.0-118.3 360.0 15.6 31.2 -18.6