==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION/DNA 22-NOV-04 1WTB . COMPND 2 MOLECULE: HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN D0; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR Y.ENOKIZONO,Y.KONISHI,K.NAGATA,K.OUHASHI,S.UESUGI, . 79 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4968.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 65.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 22.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 11.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 11.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 17.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 181 A V 0 0 74 0, 0.0 56,-0.2 0, 0.0 55,-0.1 0.000 360.0 360.0 360.0 128.5 -11.8 5.9 0.5 2 182 A K + 0 0 104 1,-0.2 48,-2.3 75,-0.1 27,-0.2 0.471 360.0 45.6-150.1 -35.1 -10.1 5.1 -2.7 3 183 A K E -A 49 0A 59 46,-0.3 2,-0.3 74,-0.2 46,-0.3 -0.281 66.2-147.9-102.5-167.5 -6.4 4.4 -2.2 4 184 A I E -A 48 0A 0 44,-1.4 44,-1.8 72,-0.3 2,-0.8 -0.943 10.0-137.3-165.1 139.1 -4.7 2.3 0.4 5 185 A F E -AB 47 75A 43 70,-2.0 70,-2.3 -2,-0.3 2,-0.5 -0.798 17.0-168.2-109.3 96.8 -1.4 2.3 2.2 6 186 A V E -A 46 0A 0 40,-0.8 40,-3.1 -2,-0.8 68,-0.3 -0.668 22.5-135.0 -79.4 122.1 0.1 -1.1 2.5 7 187 A G - 0 0 7 -2,-0.5 -1,-0.1 38,-0.2 67,-0.1 0.159 52.0 -19.7 -67.3-170.3 3.0 -0.9 5.0 8 188 A G S S+ 0 0 31 37,-0.2 37,-0.3 1,-0.1 2,-0.2 0.336 73.9 131.0 -26.1 158.0 6.5 -2.4 4.8 9 189 A L - 0 0 34 35,-1.8 -1,-0.1 34,-0.3 37,-0.1 -0.822 53.9 -12.6-177.2-143.0 7.3 -5.1 2.3 10 190 A S > - 0 0 39 -2,-0.2 3,-2.2 1,-0.1 60,-0.1 -0.709 64.7-110.6 -89.7 134.5 9.8 -6.1 -0.5 11 191 A P T 3 S+ 0 0 100 0, 0.0 -1,-0.1 0, 0.0 34,-0.1 0.720 115.6 6.2 -28.6 -35.9 12.2 -3.5 -1.8 12 192 A D T 3 S- 0 0 115 32,-0.1 3,-0.2 23,-0.0 34,-0.1 -0.273 83.3-156.9-151.4 56.2 10.2 -3.7 -5.0 13 193 A T < - 0 0 2 -3,-2.2 2,-0.5 32,-0.3 55,-0.1 -0.080 42.2 -95.3 -39.4 123.2 7.1 -5.9 -4.5 14 194 A P >> - 0 0 41 0, 0.0 3,-2.2 0, 0.0 4,-1.4 -0.235 31.2-151.5 -48.8 99.1 6.2 -7.1 -8.0 15 195 A E H 3> S+ 0 0 89 -2,-0.5 4,-1.4 1,-0.3 5,-0.1 0.686 89.4 76.3 -47.5 -19.6 3.5 -4.6 -8.9 16 196 A E H 3> S+ 0 0 147 2,-0.2 4,-0.6 1,-0.2 -1,-0.3 0.877 100.1 36.3 -64.3 -39.0 2.1 -7.4 -11.0 17 197 A K H X>>S+ 0 0 74 -3,-2.2 4,-2.6 2,-0.2 3,-1.9 0.940 112.9 57.5 -77.6 -46.8 0.6 -9.3 -8.1 18 198 A I H 3X5S+ 0 0 0 -4,-1.4 4,-1.0 1,-0.3 5,-0.3 0.817 105.3 53.9 -49.0 -29.8 -0.3 -6.0 -6.4 19 199 A R H 3X5S+ 0 0 149 -4,-1.4 4,-0.6 -5,-0.3 -1,-0.3 0.780 116.8 37.0 -75.8 -28.6 -2.2 -5.6 -9.7 20 200 A E H S+ 0 0 144 -3,-1.9 4,-5.0 -4,-0.6 5,-0.7 0.937 112.5 52.6 -86.1 -63.6 -4.0 -8.9 -9.1 21 201 A Y H <5S+ 0 0 58 -4,-2.6 -3,-0.2 1,-0.2 -2,-0.2 0.826 130.0 24.8 -39.8 -39.2 -4.4 -8.9 -5.3 22 202 A F H X<5S+ 0 0 27 -4,-0.6 3,-1.0 -6,-0.3 -3,-0.2 0.959 110.6 46.3 -61.4 -45.6 -7.1 -5.9 -9.4 24 204 A G T 3<5S+ 0 0 74 -4,-5.0 -1,-0.3 1,-0.3 -3,-0.2 0.786 104.3 64.4 -64.3 -23.3 -9.0 -9.0 -8.3 25 205 A F T 34 - 0 0 97 -23,-0.1 2,-3.2 0, 0.0 3,-0.7 -0.441 37.5-103.6 158.6 125.1 12.0 2.4 -1.5 36 216 A D T 3 S+ 0 0 90 6,-0.2 7,-0.0 1,-0.2 6,-0.0 -0.312 90.3 101.4 -62.7 71.8 14.5 4.1 0.9 37 217 A N T 3 S+ 0 0 113 -2,-3.2 -1,-0.2 3,-0.0 0, 0.0 0.463 77.9 43.6-130.6 -13.4 16.1 6.1 -1.9 38 218 A K S < S+ 0 0 151 -3,-0.7 -2,-0.1 3,-0.0 0, 0.0 0.615 137.7 7.0-106.2 -22.1 14.5 9.6 -1.4 39 219 A T S S- 0 0 65 -4,-0.2 -3,-0.1 2,-0.1 4,-0.0 0.471 92.4-124.3-136.0 -16.1 14.8 9.8 2.3 40 220 A N + 0 0 131 -5,-0.2 2,-0.1 1,-0.1 -4,-0.1 0.933 65.8 123.6 68.4 48.5 16.8 6.7 3.3 41 221 A K S S- 0 0 113 -6,-0.0 -5,-0.2 1,-0.0 -1,-0.1 -0.309 77.1 -88.4-119.4-156.4 14.3 5.3 5.8 42 222 A R S S+ 0 0 160 -2,-0.1 -6,-0.2 1,-0.1 -2,-0.0 0.845 84.0 114.5 -85.5 -38.7 12.5 2.0 6.3 43 223 A R + 0 0 55 -8,-0.1 -34,-0.3 -35,-0.1 -1,-0.1 0.436 23.5 129.2 4.4-106.4 9.5 3.0 4.2 44 224 A G + 0 0 5 -36,-0.1 -35,-1.8 1,-0.1 2,-0.1 0.876 42.0 113.7 32.2 76.1 9.7 0.5 1.3 45 225 A F - 0 0 35 -37,-0.3 2,-0.3 -34,-0.1 -32,-0.3 -0.145 61.6 -88.7-135.4-129.0 6.1 -0.7 1.5 46 226 A C E -A 6 0A 0 -40,-3.1 -40,-0.8 -13,-0.2 2,-0.3 -0.992 19.3-162.3-156.8 162.4 3.2 -0.4 -0.9 47 227 A F E -AC 5 32A 35 -15,-1.9 -15,-1.1 -2,-0.3 2,-0.4 -0.950 12.7-173.4-149.9 124.6 0.3 1.8 -1.9 48 228 A I E -AC 4 31A 0 -44,-1.8 -44,-1.4 -2,-0.3 2,-0.3 -0.888 4.6-160.5-122.9 153.1 -2.6 0.8 -4.0 49 229 A T E -AC 3 30A 5 -19,-1.8 -20,-3.7 -2,-0.4 -19,-0.5 -0.942 5.8-153.8-130.0 152.9 -5.4 2.7 -5.5 50 230 A F E - C 0 28A 0 -48,-2.3 -22,-0.3 -22,-0.4 6,-0.0 -0.981 20.1-139.9-130.1 120.6 -8.8 1.8 -6.7 51 231 A K S S+ 0 0 119 -24,-1.5 -1,-0.1 -2,-0.5 -23,-0.1 0.872 101.0 41.5 -40.8 -37.5 -10.6 3.9 -9.4 52 232 A E S S- 0 0 72 -25,-0.8 -2,-0.4 -50,-0.1 -23,-0.1 0.087 87.9-126.3 -90.9-157.6 -13.5 3.0 -7.1 53 233 A E S > S+ 0 0 92 -4,-0.1 4,-1.6 3,-0.1 -2,-0.1 0.301 86.2 80.8-137.5 1.2 -13.7 2.9 -3.3 54 234 A E H > S+ 0 0 92 2,-0.2 4,-2.5 3,-0.2 5,-0.3 0.976 90.5 45.6 -80.0 -60.5 -15.0 -0.6 -2.6 55 235 A P H > S+ 0 0 4 0, 0.0 4,-3.4 0, 0.0 -1,-0.1 0.890 118.2 50.9 -48.9 -33.8 -12.0 -2.9 -2.9 56 236 A V H > S+ 0 0 0 2,-0.2 4,-2.2 1,-0.2 5,-0.3 0.942 104.2 55.0 -64.7 -51.2 -10.5 -0.1 -0.8 57 237 A K H X S+ 0 0 102 -4,-1.6 4,-0.6 1,-0.2 -1,-0.2 0.943 116.7 37.1 -46.1 -57.4 -13.4 -0.3 1.6 58 238 A K H >X S+ 0 0 96 -4,-2.5 3,-2.5 1,-0.2 4,-1.4 0.943 107.7 67.2 -60.2 -52.8 -12.7 -4.0 2.1 59 239 A I H >< S+ 0 0 0 -4,-3.4 3,-1.5 -5,-0.3 -2,-0.2 0.874 96.7 51.9 -34.2 -65.0 -9.0 -3.6 1.9 60 240 A M H >< S+ 0 0 54 -4,-2.2 3,-0.9 1,-0.3 -1,-0.3 0.806 105.8 58.6 -48.7 -26.7 -8.7 -1.6 5.2 61 241 A E H << S+ 0 0 134 -3,-2.5 -1,-0.3 -4,-0.6 -2,-0.3 0.908 116.0 32.4 -68.1 -40.1 -10.7 -4.5 6.5 62 242 A K T << S+ 0 0 85 -3,-1.5 -1,-0.3 -4,-1.4 -2,-0.3 0.052 80.8 156.6-101.4 21.6 -7.9 -6.8 5.4 63 243 A K < + 0 0 77 -3,-0.9 11,-4.4 -5,-0.3 2,-1.9 0.670 66.2 64.9 -14.7 -50.2 -5.4 -4.0 6.1 64 244 A Y E S-D 73 0B 135 9,-0.3 -1,-0.3 -3,-0.2 9,-0.2 -0.522 82.2-179.5 -84.3 74.1 -2.8 -6.7 6.5 65 245 A H E -D 72 0B 0 -2,-1.9 7,-1.2 7,-1.4 2,-0.6 -0.392 27.1-138.1 -74.8 152.2 -3.0 -7.9 2.8 66 246 A N E -D 71 0B 101 5,-0.2 2,-0.8 -2,-0.1 5,-0.3 -0.659 19.1-168.3-113.3 74.3 -0.8 -10.8 1.6 67 247 A V E > -D 70 0B 1 3,-1.2 3,-1.7 -2,-0.6 2,-1.2 -0.495 57.7 -74.3 -66.0 103.0 0.4 -9.7 -1.9 68 248 A G T 3 S- 0 0 59 -2,-0.8 -1,-0.1 1,-0.3 3,-0.0 -0.149 121.1 -9.2 45.2 -83.9 1.9 -12.8 -3.4 69 249 A L T 3 S+ 0 0 110 -2,-1.2 -1,-0.3 -55,-0.1 2,-0.3 0.739 129.8 68.5-106.9 -41.2 5.0 -12.8 -1.2 70 250 A S E < -D 67 0B 11 -3,-1.7 -3,-1.2 -4,-0.1 2,-0.3 -0.609 56.4-179.6 -87.9 145.5 4.7 -9.4 0.5 71 251 A K E +D 66 0B 135 -5,-0.3 2,-0.3 -2,-0.3 -5,-0.2 -0.993 9.5 163.4-141.0 141.6 2.1 -8.5 3.0 72 252 A C E -D 65 0B 9 -7,-1.2 -7,-1.4 -2,-0.3 2,-1.2 -0.989 47.3 -78.8-158.0 167.6 1.5 -5.2 4.9 73 253 A E E -D 64 0B 79 -2,-0.3 2,-1.7 -9,-0.2 -9,-0.3 -0.563 43.0-160.9 -73.1 95.1 -0.7 -2.9 7.0 74 254 A I + 0 0 0 -11,-4.4 2,-0.5 -2,-1.2 -68,-0.3 -0.569 17.7 171.4 -83.0 79.0 -3.0 -1.5 4.3 75 255 A K B -B 5 0A 95 -70,-2.3 -70,-2.0 -2,-1.7 3,-0.0 -0.775 57.3 -85.4 -88.3 123.7 -4.3 1.6 6.1 76 256 A V - 0 0 50 -2,-0.5 -72,-0.3 -72,-0.3 -1,-0.1 -0.014 62.7-136.9 -37.4 99.1 -6.3 3.7 3.6 77 257 A A - 0 0 6 -29,-0.2 2,-0.2 -75,-0.0 -74,-0.2 0.410 25.7-172.6 -45.0-171.6 -3.3 5.5 2.3 78 258 A M 0 0 146 -74,-0.1 -3,-0.0 -3,-0.0 -1,-0.0 -0.776 360.0 360.0 171.8 144.1 -3.0 9.2 1.5 79 259 A S 0 0 161 -2,-0.2 0, 0.0 0, 0.0 0, 0.0 -0.471 360.0 360.0-113.8 360.0 -0.5 11.6 -0.0