==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 03-MAY-99 1WWB . COMPND 2 MOLECULE: PROTEIN (BRAIN DERIVED NEUROTROPHIC FACTOR . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.WIESMANN,M.H.ULTSCH,S.H.BASS,A.M.DE VOS . 103 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8127.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 56.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 39 37.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 4 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 16 15.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 283 X V 0 0 181 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-140.7 -4.0 52.0 7.0 2 284 X H + 0 0 180 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.687 360.0 156.3 -95.7 147.3 -1.0 53.9 8.6 3 285 X F - 0 0 167 -2,-0.3 0, 0.0 0, 0.0 0, 0.0 -0.939 42.6 -82.3-172.5 149.6 -1.1 55.3 12.2 4 286 X A - 0 0 76 -2,-0.3 2,-0.1 1,-0.1 0, 0.0 -0.006 58.1 -89.6 -51.5 156.4 1.1 56.4 15.2 5 287 X P - 0 0 124 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 -0.433 34.6-170.0 -77.1 140.3 2.4 53.7 17.6 6 288 X T - 0 0 105 -2,-0.1 2,-1.2 3,-0.0 3,-0.0 -0.989 17.8-145.3-128.7 122.5 0.6 52.6 20.8 7 289 X I + 0 0 150 -2,-0.4 3,-0.1 1,-0.1 0, 0.0 -0.773 25.7 175.2 -84.5 101.9 2.3 50.4 23.4 8 290 X T + 0 0 119 -2,-1.2 2,-0.2 1,-0.2 -1,-0.1 0.293 60.6 21.0 -94.4 7.0 -0.7 48.3 24.4 9 291 X F + 0 0 152 2,-0.0 2,-0.3 -3,-0.0 -1,-0.2 -0.830 52.5 159.9-172.9 133.6 1.0 45.9 26.8 10 292 X L + 0 0 150 -2,-0.2 2,-0.2 -3,-0.1 -3,-0.0 -0.822 23.6 174.4-158.2 112.3 4.3 45.8 28.7 11 293 X E - 0 0 147 -2,-0.3 3,-0.1 1,-0.1 -2,-0.0 -0.662 37.2 -72.9-122.8 178.0 4.5 43.5 31.6 12 294 X S - 0 0 97 -2,-0.2 -1,-0.1 1,-0.1 -2,-0.0 -0.402 67.3 -84.5 -67.5 146.5 6.9 42.1 34.3 13 295 X P - 0 0 127 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.128 37.4-157.8 -55.0 139.3 9.6 39.7 33.0 14 296 X T - 0 0 138 -3,-0.1 2,-0.3 2,-0.0 -3,-0.0 -0.744 16.2-146.3-111.0 163.5 8.9 35.9 32.5 15 297 X S - 0 0 75 -2,-0.3 2,-0.3 2,-0.0 0, 0.0 -0.890 16.3-162.7-136.2 166.8 11.7 33.4 32.4 16 298 X D - 0 0 101 -2,-0.3 2,-0.5 2,-0.0 51,-0.0 -0.989 10.4-152.0-145.8 141.2 12.9 30.1 31.0 17 299 X H - 0 0 98 -2,-0.3 51,-3.3 2,-0.0 2,-0.5 -0.967 11.5-170.7-123.1 115.9 15.7 27.8 32.2 18 300 X H E -A 67 0A 102 -2,-0.5 2,-0.3 49,-0.2 49,-0.2 -0.902 3.0-167.0-110.0 131.6 17.5 25.6 29.7 19 301 X W E -A 66 0A 107 47,-3.0 47,-2.8 -2,-0.5 2,-0.4 -0.892 1.5-161.9-117.2 147.7 19.8 22.9 30.7 20 302 X a E -A 65 0A 57 -2,-0.3 45,-0.2 45,-0.2 43,-0.0 -0.994 14.9-152.6-135.2 130.1 22.3 21.0 28.6 21 303 X I E -A 64 0A 14 43,-2.5 43,-1.6 -2,-0.4 2,-0.1 -0.894 35.6-141.5 -98.2 102.6 24.1 17.6 29.3 22 304 X P E +A 63 0A 100 0, 0.0 2,-0.3 0, 0.0 41,-0.2 -0.321 30.2 157.5 -70.8 144.6 27.3 18.2 27.2 23 305 X F E -A 62 0A 25 39,-1.8 39,-1.3 -2,-0.1 2,-0.3 -0.960 30.8-145.4-156.9 169.7 29.0 15.5 25.1 24 306 X T E -A 61 0A 77 -2,-0.3 2,-0.3 37,-0.2 37,-0.2 -0.979 20.2-174.9-142.4 133.5 31.4 14.7 22.3 25 307 X V E -A 60 0A 16 35,-2.3 35,-3.2 -2,-0.3 2,-0.4 -0.948 7.7-161.7-131.2 151.2 31.0 11.7 20.0 26 308 X K E +A 59 0A 145 -2,-0.3 2,-0.3 33,-0.2 33,-0.2 -0.999 29.8 123.8-134.9 135.8 33.2 10.3 17.2 27 309 X G - 0 0 14 31,-1.0 3,-0.1 -2,-0.4 -2,-0.0 -0.961 48.3-109.3-178.4 166.6 32.1 7.9 14.5 28 310 X N S S+ 0 0 88 -2,-0.3 2,-0.2 1,-0.2 57,-0.1 -0.765 106.7 30.7-162.3 109.8 31.9 7.4 10.7 29 311 X P S S- 0 0 60 0, 0.0 -1,-0.2 0, 0.0 55,-0.1 0.505 125.8 -84.1 -57.3 169.5 29.2 7.4 9.4 30 312 X K - 0 0 117 -2,-0.2 2,-0.3 1,-0.1 -2,-0.2 -0.178 55.2-110.2 -48.9 136.4 27.8 9.8 12.0 31 313 X P - 0 0 7 0, 0.0 2,-0.5 0, 0.0 52,-0.2 -0.578 18.7-121.4 -81.0 136.9 26.7 7.8 15.1 32 314 X A E -C 82 0B 68 50,-2.0 50,-2.9 -2,-0.3 2,-0.6 -0.650 31.2-144.6 -72.1 119.8 23.0 7.4 16.0 33 315 X L E +C 81 0B 36 -2,-0.5 2,-0.4 48,-0.2 48,-0.2 -0.798 22.0 176.1 -97.9 120.9 22.6 8.8 19.5 34 316 X Q E -C 80 0B 76 46,-2.2 46,-2.8 -2,-0.6 2,-0.3 -0.968 11.9-156.1-122.9 136.2 20.2 7.2 21.9 35 317 X W E -CD 79 42B 6 7,-0.5 7,-2.7 -2,-0.4 2,-0.3 -0.813 5.0-166.1-110.4 153.0 19.7 8.3 25.5 36 318 X F E -CD 78 41B 50 42,-2.0 42,-2.4 -2,-0.3 2,-0.4 -0.952 7.5-153.6-132.0 150.5 18.4 6.3 28.5 37 319 X Y E > S-CD 77 40B 62 3,-3.4 3,-2.3 -2,-0.3 40,-0.2 -0.996 79.2 -17.2-129.1 123.1 17.3 7.7 31.9 38 320 X N T 3 S- 0 0 94 38,-2.8 -1,-0.1 -2,-0.4 39,-0.1 0.912 130.4 -50.3 44.0 53.4 17.5 5.5 34.9 39 321 X G T 3 S+ 0 0 69 37,-0.3 2,-0.4 1,-0.2 -1,-0.3 0.205 118.8 106.4 76.9 -15.6 17.8 2.4 32.7 40 322 X A E < S-D 37 0B 57 -3,-2.3 -3,-3.4 1,-0.1 -1,-0.2 -0.792 80.5 -98.1-102.2 142.0 14.8 3.2 30.6 41 323 X I E -D 36 0B 101 -2,-0.4 2,-0.7 -5,-0.3 -5,-0.3 -0.179 33.7-136.7 -50.7 140.6 14.9 4.5 27.0 42 324 X L E -D 35 0B 26 -7,-2.7 2,-0.6 -3,-0.0 -7,-0.5 -0.919 12.8-150.2-107.3 109.1 14.5 8.3 26.9 43 325 X N - 0 0 122 -2,-0.7 5,-0.1 -9,-0.1 -9,-0.0 -0.733 21.4-124.4 -82.4 118.0 12.1 9.2 24.1 44 326 X E + 0 0 80 -2,-0.6 2,-0.2 1,-0.1 5,-0.2 -0.255 41.5 159.9 -62.7 148.8 13.1 12.6 22.8 45 327 X S - 0 0 55 3,-3.1 3,-0.2 0, 0.0 -1,-0.1 -0.813 56.7 -69.7-152.2-171.0 10.4 15.3 22.7 46 328 X K S S+ 0 0 162 -2,-0.2 3,-0.1 1,-0.2 -2,-0.1 0.624 130.9 40.5 -67.5 -14.0 9.6 19.0 22.5 47 329 X Y S S+ 0 0 136 1,-0.3 20,-2.5 19,-0.1 2,-0.4 0.586 123.5 31.3-107.4 -17.7 11.0 19.4 26.1 48 330 X I E S+B 66 0A 23 18,-0.2 -3,-3.1 -3,-0.2 2,-0.3 -0.931 73.7 140.5-146.0 117.8 14.1 17.1 25.9 49 331 X C E -B 65 0A 30 16,-2.0 16,-4.2 -2,-0.4 2,-0.3 -0.995 47.7-103.5-155.9 160.8 16.2 16.5 22.9 50 332 X T E -B 64 0A 29 -2,-0.3 2,-0.4 14,-0.3 14,-0.2 -0.672 33.9-175.0 -85.3 135.5 19.7 16.0 21.5 51 333 X K E -B 63 0A 78 12,-2.6 12,-2.1 -2,-0.3 2,-0.7 -0.999 18.0-149.4-131.8 129.6 21.2 18.9 19.6 52 334 X I E +B 62 0A 50 -2,-0.4 10,-0.3 10,-0.2 3,-0.1 -0.907 23.6 170.9 -96.9 114.3 24.6 18.7 17.8 53 335 X H E + 0 0 110 8,-1.8 2,-0.5 -2,-0.7 9,-0.2 0.845 61.0 36.2 -93.0 -42.1 25.9 22.3 18.0 54 336 X V E -B 61 0A 86 7,-2.4 7,-3.0 0, 0.0 2,-0.4 -0.970 66.8-169.2-122.3 127.8 29.5 22.0 16.8 55 337 X T E +B 60 0A 87 -2,-0.5 5,-0.2 5,-0.2 3,-0.0 -0.907 15.7 165.7-116.8 138.4 30.6 19.8 14.0 56 338 X N - 0 0 93 3,-2.0 -1,-0.1 -2,-0.4 4,-0.1 0.363 61.4 -82.4-111.6-108.2 34.1 18.9 12.9 57 339 X H S S+ 0 0 152 -2,-0.0 -27,-0.1 -29,-0.0 3,-0.0 0.578 118.0 0.7-125.3 -53.4 34.2 15.8 10.5 58 340 X T S S+ 0 0 56 -32,-0.1 -31,-1.0 -30,-0.1 2,-0.6 0.494 118.5 88.0-112.9 -17.4 34.1 12.9 12.8 59 341 X E E -A 26 0A 61 -33,-0.2 -3,-2.0 -35,-0.1 2,-0.5 -0.806 56.1-173.8 -94.0 114.9 33.9 15.0 16.0 60 342 X Y E -AB 25 55A 29 -35,-3.2 -35,-2.3 -2,-0.6 2,-0.6 -0.934 4.3-168.5-114.5 117.6 30.4 15.9 17.1 61 343 X H E +AB 24 54A 52 -7,-3.0 -7,-2.4 -2,-0.5 -8,-1.8 -0.906 29.4 128.5-106.1 118.5 29.8 18.2 20.0 62 344 X G E -AB 23 52A 5 -39,-1.3 -39,-1.8 -2,-0.6 2,-0.3 -0.643 41.7-121.7-143.9-158.3 26.3 18.5 21.4 63 345 X a E -AB 22 51A 11 -12,-2.1 -12,-2.6 -41,-0.2 2,-0.7 -0.982 21.5-124.7-151.7 154.5 24.0 18.4 24.3 64 346 X L E -AB 21 50A 1 -43,-1.6 -43,-2.5 -2,-0.3 2,-0.5 -0.958 47.6-146.7 -95.6 118.4 20.9 16.5 25.5 65 347 X Q E -AB 20 49A 38 -16,-4.2 -16,-2.0 -2,-0.7 2,-0.5 -0.810 19.6-170.7 -98.6 133.3 18.8 19.7 26.0 66 348 X L E -AB 19 48A 1 -47,-2.8 -47,-3.0 -2,-0.5 2,-0.5 -0.975 11.7-149.0-119.8 126.1 16.2 19.9 28.7 67 349 X D E S-A 18 0A 48 -20,-2.5 -49,-0.2 -2,-0.5 -2,-0.0 -0.842 76.5 -21.2 -98.6 128.3 13.8 22.9 28.9 68 350 X N S S- 0 0 67 -51,-3.3 -1,-0.2 -2,-0.5 -50,-0.1 0.895 85.0-175.1 39.0 62.2 12.7 23.9 32.4 69 351 X P - 0 0 5 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.445 6.9-153.6 -79.4 159.2 13.4 20.6 34.0 70 352 X T > - 0 0 56 -2,-0.1 3,-2.2 27,-0.1 27,-0.3 -0.530 41.8 -79.7-119.4-171.6 12.5 19.9 37.6 71 353 X H G > S+ 0 0 35 1,-0.3 3,-1.1 27,-0.3 28,-0.1 0.677 124.1 74.0 -66.1 -14.4 13.8 17.7 40.4 72 354 X M G 3 S+ 0 0 119 1,-0.2 -1,-0.3 24,-0.0 27,-0.0 0.636 91.9 52.6 -72.5 -14.5 11.8 15.0 38.6 73 355 X N G < S+ 0 0 38 -3,-2.2 -1,-0.2 24,-0.1 -2,-0.2 0.365 80.7 118.7 -99.0 2.8 14.5 14.9 35.9 74 356 X N < + 0 0 31 -3,-1.1 2,-0.3 -4,-0.2 21,-0.2 -0.498 48.7 80.3 -67.4 137.5 17.3 14.4 38.4 75 357 X G E S- E 0 94B 12 19,-2.7 19,-3.5 -2,-0.2 2,-0.6 -0.990 79.4 -40.2 159.7-168.6 19.0 11.1 37.6 76 358 X D E - E 0 93B 67 -2,-0.3 -38,-2.8 17,-0.2 2,-0.5 -0.857 44.4-163.9-101.3 120.4 21.4 9.0 35.6 77 359 X Y E -CE 37 92B 4 15,-2.7 15,-2.8 -2,-0.6 2,-0.5 -0.880 1.4-164.0-106.7 126.3 21.6 9.6 31.9 78 360 X T E -CE 36 91B 12 -42,-2.4 -42,-2.0 -2,-0.5 2,-0.4 -0.923 2.7-158.9-113.5 126.4 23.2 7.0 29.6 79 361 X L E -CE 35 90B 17 11,-2.8 11,-1.5 -2,-0.5 2,-0.5 -0.897 3.9-168.6-103.4 133.7 24.2 7.9 26.1 80 362 X I E -CE 34 89B 19 -46,-2.8 -46,-2.2 -2,-0.4 2,-0.7 -0.973 5.4-162.3-121.1 111.6 24.7 5.0 23.6 81 363 X A E -CE 33 88B 12 7,-2.0 7,-2.3 -2,-0.5 2,-0.3 -0.872 15.7-162.6 -96.7 115.7 26.3 6.2 20.3 82 364 X K E +CE 32 87B 106 -50,-2.9 -50,-2.0 -2,-0.7 2,-0.3 -0.706 14.5 169.5-106.0 155.8 25.7 3.6 17.6 83 365 X N - 0 0 37 3,-1.6 -53,-0.1 -2,-0.3 -56,-0.0 -0.883 49.3-104.2-148.5 172.1 27.4 2.9 14.2 84 366 X E S S+ 0 0 149 -2,-0.3 3,-0.1 1,-0.2 -1,-0.1 0.886 124.7 41.5 -70.3 -36.0 27.6 0.3 11.4 85 367 X Y S S- 0 0 197 1,-0.2 2,-0.3 -57,-0.1 -1,-0.2 0.894 128.3 -46.1 -77.7 -47.1 30.9 -0.7 12.9 86 368 X G - 0 0 41 2,-0.0 -3,-1.6 -5,-0.0 2,-0.3 -0.925 49.6-107.3-167.7-167.9 30.2 -0.6 16.6 87 369 X K E -E 82 0B 138 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.995 14.8-156.9-144.8 148.8 28.7 1.2 19.6 88 370 X D E -E 81 0B 94 -7,-2.3 -7,-2.0 -2,-0.3 2,-0.3 -0.887 5.9-161.0-124.9 156.1 29.8 3.1 22.7 89 371 X E E +E 80 0B 108 -2,-0.3 2,-0.3 -9,-0.2 -9,-0.2 -0.958 14.7 163.2-134.9 149.5 28.1 3.8 26.1 90 372 X K E -E 79 0B 139 -11,-1.5 -11,-2.8 -2,-0.3 2,-0.3 -0.933 16.7-157.9-161.6 144.7 28.8 6.4 28.8 91 373 X Q E -E 78 0B 126 -2,-0.3 2,-0.3 -13,-0.3 -13,-0.3 -0.958 6.2-169.1-132.6 153.6 26.5 7.5 31.6 92 374 X I E -E 77 0B 84 -15,-2.8 -15,-2.7 -2,-0.3 2,-0.5 -0.978 23.1-120.8-141.7 152.5 26.4 10.6 33.7 93 375 X S E -E 76 0B 86 -2,-0.3 2,-0.5 -17,-0.2 -17,-0.2 -0.846 31.4-168.0 -96.5 124.4 24.7 11.8 36.9 94 376 X A E -E 75 0B 12 -19,-3.5 -19,-2.7 -2,-0.5 2,-0.5 -0.941 13.4-176.5-121.7 129.1 22.5 14.9 36.4 95 377 X H + 0 0 121 -2,-0.5 3,-0.1 -21,-0.2 -24,-0.1 -0.979 10.9 164.2-121.0 122.8 20.9 17.1 39.0 96 378 X F + 0 0 13 -2,-0.5 2,-0.3 1,-0.3 -25,-0.2 0.762 67.0 5.7-106.7 -35.8 18.6 20.0 37.8 97 379 X M S S- 0 0 84 -27,-0.3 -1,-0.3 -26,-0.0 -23,-0.2 -0.973 74.3-112.3-155.1 134.8 16.7 21.1 40.8 98 380 X G - 0 0 42 -2,-0.3 -27,-0.3 1,-0.1 3,-0.1 -0.233 49.1 -90.3 -63.2 156.1 16.8 20.2 44.5 99 381 X W - 0 0 177 1,-0.1 -1,-0.1 -28,-0.1 -27,-0.0 -0.343 55.2 -88.5 -64.3 148.8 13.8 18.3 45.9 100 382 X P - 0 0 71 0, 0.0 -1,-0.1 0, 0.0 -3,-0.0 -0.298 53.0-101.0 -57.9 144.7 11.0 20.6 47.2 101 383 X G - 0 0 77 1,-0.1 0, 0.0 -3,-0.1 0, 0.0 -0.254 28.8-147.5 -67.7 154.7 11.5 21.5 50.9 102 384 X I 0 0 166 1,-0.2 -1,-0.1 -2,-0.0 0, 0.0 0.844 360.0 360.0 -88.5 -99.5 9.5 19.8 53.8 103 385 X D 0 0 209 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 -0.854 360.0 360.0 167.4 360.0 8.5 21.6 57.1