==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 30-APR-99 1WWC . COMPND 2 MOLECULE: PROTEIN (NT-3 GROWTH FACTOR RECEPTOR TRKC); . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.H.ULTSCH,C.WIESMANN,L.C.SIMMONS,J.HENRICH,M.YANG,D.REILLY, . 105 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 9001.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 56 53.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 38 36.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 3 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 15 14.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 300 A T 0 0 162 0, 0.0 2,-0.7 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 166.5 48.4 -6.5 55.1 2 301 A V - 0 0 121 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.783 360.0-166.7 -86.9 111.8 45.7 -8.6 56.8 3 302 A Y + 0 0 202 -2,-0.7 0, 0.0 0, 0.0 0, 0.0 -0.729 17.4 163.1-103.6 152.1 44.5 -11.4 54.5 4 303 A Y - 0 0 164 -2,-0.3 3,-0.1 3,-0.0 -2,-0.0 -0.944 41.6 -94.6-155.2 154.3 41.6 -13.7 54.6 5 304 A P - 0 0 106 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.507 55.8 -78.5 -74.8 160.7 39.9 -15.9 51.9 6 305 A P - 0 0 132 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.100 46.0-171.9 -55.1 147.0 36.9 -14.6 49.9 7 306 A R - 0 0 176 -3,-0.1 2,-0.8 0, 0.0 -3,-0.0 -0.987 23.0-137.3-148.8 128.4 33.4 -14.6 51.4 8 307 A V + 0 0 124 -2,-0.3 3,-0.1 1,-0.2 0, 0.0 -0.836 24.2 176.7 -85.1 107.3 30.0 -13.9 49.8 9 308 A V + 0 0 131 -2,-0.8 2,-0.3 1,-0.3 -1,-0.2 0.859 65.9 13.0 -79.2 -38.2 28.2 -11.7 52.3 10 309 A S + 0 0 84 2,-0.0 -1,-0.3 0, 0.0 2,-0.3 -1.000 51.9 163.8-150.1 140.4 25.1 -11.2 50.2 11 310 A L - 0 0 157 -2,-0.3 2,-0.3 -3,-0.1 -3,-0.0 -0.866 23.0-167.0-155.2 114.6 23.4 -12.6 47.1 12 311 A E - 0 0 141 -2,-0.3 3,-0.1 1,-0.1 -2,-0.0 -0.835 25.5-104.8-114.7 150.4 19.8 -11.8 46.5 13 312 A E - 0 0 167 -2,-0.3 -1,-0.1 1,-0.1 -2,-0.0 -0.228 63.2 -73.2 -61.5 152.2 17.0 -13.0 44.2 14 313 A P - 0 0 133 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 -0.167 51.0-171.8 -54.3 140.7 16.2 -10.6 41.3 15 314 A E - 0 0 147 -3,-0.1 2,-0.1 2,-0.0 -3,-0.0 -0.995 26.8-110.3-134.7 138.3 14.4 -7.4 42.0 16 315 A L - 0 0 178 -2,-0.4 2,-0.4 2,-0.0 0, 0.0 -0.369 32.6-172.7 -64.1 145.9 13.0 -4.9 39.5 17 316 A R - 0 0 187 -2,-0.1 2,-0.6 2,-0.0 50,-0.0 -0.988 10.6-156.4-148.5 119.2 14.7 -1.5 39.3 18 317 A L + 0 0 146 -2,-0.4 50,-0.5 2,-0.0 2,-0.3 -0.907 22.9 167.8 -97.0 123.5 13.4 1.4 37.3 19 318 A E E -A 67 0A 49 -2,-0.6 2,-0.4 48,-0.1 48,-0.2 -0.926 33.1-126.0-134.9 157.2 16.0 3.9 36.3 20 319 A H E -A 66 0A 78 46,-2.0 46,-2.6 -2,-0.3 2,-0.4 -0.894 28.0-155.0-101.1 132.3 16.2 6.9 33.8 21 320 A a E -A 65 0A 61 -2,-0.4 2,-0.7 44,-0.2 44,-0.2 -0.958 17.0-164.0-117.0 130.9 19.0 6.8 31.3 22 321 A I E -A 64 0A 25 42,-2.0 42,-2.3 -2,-0.4 2,-0.2 -0.970 28.8-151.8-105.4 104.7 20.7 9.7 29.5 23 322 A E E +A 63 0A 158 -2,-0.7 2,-0.3 40,-0.2 40,-0.2 -0.560 19.0 177.0 -85.7 142.6 22.5 7.8 26.8 24 323 A F E -A 62 0A 14 38,-2.2 38,-2.0 -2,-0.2 2,-0.4 -0.990 20.5-165.1-142.8 154.4 25.7 9.1 25.2 25 324 A V E -A 61 0A 87 -2,-0.3 2,-0.4 36,-0.2 36,-0.2 -0.986 15.7-179.5-140.2 127.5 28.4 8.1 22.6 26 325 A V E -A 60 0A 19 34,-2.8 34,-2.9 -2,-0.4 2,-0.4 -0.983 7.5-164.8-130.8 138.8 31.7 10.0 22.5 27 326 A R E +A 59 0A 181 -2,-0.4 2,-0.3 32,-0.2 32,-0.2 -0.965 22.0 142.6-121.3 147.9 34.7 9.4 20.2 28 327 A G - 0 0 17 30,-1.6 -2,-0.0 -2,-0.4 54,-0.0 -0.817 40.0-123.3 177.5 136.1 38.2 10.7 20.6 29 328 A N S S+ 0 0 106 -2,-0.3 54,-0.1 2,-0.1 -2,-0.0 -0.960 108.2 36.4-132.4 114.1 41.8 9.8 20.0 30 329 A P S S- 0 0 59 0, 0.0 55,-0.1 0, 0.0 -1,-0.0 0.541 124.4 -95.1 -62.3 158.7 43.4 9.9 22.5 31 330 A P - 0 0 75 0, 0.0 -2,-0.1 0, 0.0 27,-0.1 -0.291 48.1-122.0 -51.0 121.5 40.4 8.7 24.7 32 331 A P - 0 0 18 0, 0.0 2,-0.3 0, 0.0 51,-0.2 -0.256 9.8-124.0 -71.1 154.1 38.5 11.7 26.1 33 332 A T E -C 82 0B 71 49,-2.6 49,-1.8 -2,-0.0 2,-0.4 -0.731 28.6-143.5 -94.9 138.6 37.9 12.5 29.7 34 333 A L E +C 81 0B 27 -2,-0.3 2,-0.4 47,-0.2 47,-0.2 -0.939 21.7 172.9-113.0 130.0 34.1 13.0 30.4 35 334 A H E -C 80 0B 104 45,-2.5 45,-2.8 -2,-0.4 2,-0.3 -0.975 16.7-146.4-133.3 143.4 32.6 15.5 32.9 36 335 A W E -C 79 0B 16 -2,-0.4 7,-2.0 43,-0.2 2,-0.4 -0.842 7.4-165.1-112.2 147.8 28.9 16.3 33.5 37 336 A L E -CD 78 42B 38 41,-2.0 41,-2.1 -2,-0.3 2,-0.6 -0.972 11.0-151.3-128.8 143.4 27.2 19.6 34.5 38 337 A H E > S-CD 77 41B 41 3,-3.5 3,-1.4 -2,-0.4 39,-0.2 -0.945 87.8 -20.6-113.5 106.4 23.7 20.0 35.7 39 338 A N T 3 S- 0 0 83 37,-2.5 -1,-0.2 -2,-0.6 38,-0.1 0.938 129.9 -50.3 61.6 44.7 22.4 23.5 34.7 40 339 A G T 3 S+ 0 0 45 1,-0.2 -1,-0.3 36,-0.1 37,-0.1 0.256 120.2 109.6 78.2 -11.1 26.0 24.6 34.2 41 340 A Q E < S-D 38 0B 129 -3,-1.4 -3,-3.5 1,-0.1 -1,-0.2 -0.671 81.7 -93.9 -97.6 148.5 27.0 23.3 37.7 42 341 A P E -D 37 0B 96 0, 0.0 2,-0.3 0, 0.0 -5,-0.2 -0.415 45.0-120.6 -62.8 125.8 29.3 20.3 38.4 43 342 A L - 0 0 28 -7,-2.0 2,-0.7 -2,-0.2 -7,-0.2 -0.566 15.3-142.9 -73.9 128.1 27.2 17.2 38.9 44 343 A R - 0 0 221 -2,-0.3 2,-0.2 -6,-0.0 5,-0.1 -0.834 22.4-155.8 -88.4 112.4 27.6 15.4 42.2 45 344 A E + 0 0 105 -2,-0.7 5,-0.2 1,-0.1 2,-0.2 -0.537 27.4 137.9 -90.7 165.2 27.3 11.6 41.6 46 345 A S S S- 0 0 74 3,-2.7 -1,-0.1 -2,-0.2 0, 0.0 -0.517 71.1 -53.9-161.7-135.5 26.3 8.9 44.0 47 346 A K S S+ 0 0 163 -2,-0.2 3,-0.1 3,-0.1 20,-0.0 0.651 135.8 49.5 -99.5 -28.7 24.2 5.8 44.2 48 347 A I S S+ 0 0 55 1,-0.2 19,-3.0 18,-0.1 2,-0.5 0.833 120.1 37.8 -75.8 -38.9 21.1 7.8 42.9 49 348 A I E S+B 66 0A 13 17,-0.2 -3,-2.7 -5,-0.1 2,-0.3 -0.968 77.7 153.8-116.5 119.4 23.2 9.2 40.0 50 349 A H E -B 65 0A 42 15,-1.9 15,-3.6 -2,-0.5 2,-0.5 -0.999 36.0-134.1-148.8 140.3 25.8 6.8 38.4 51 350 A V E -B 64 0A 21 -2,-0.3 2,-0.4 13,-0.3 13,-0.2 -0.849 20.7-166.9 -94.6 130.0 27.5 6.5 35.0 52 351 A E E -B 63 0A 83 11,-3.0 11,-2.3 -2,-0.5 2,-0.4 -0.979 7.0-149.5-120.8 133.3 27.6 3.1 33.4 53 352 A Y E -B 62 0A 79 -2,-0.4 9,-0.3 9,-0.2 3,-0.1 -0.856 18.4-175.1-103.4 137.7 29.8 2.2 30.4 54 353 A Y E S- 0 0 149 7,-2.5 2,-0.3 1,-0.5 8,-0.2 0.646 86.3 -2.5 -97.4 -14.7 29.0 -0.4 27.9 55 354 A Q E -B 61 0A 89 6,-1.4 6,-2.4 -3,-0.1 -1,-0.5 -0.959 67.3-161.4-174.8 141.5 32.4 0.3 26.3 56 355 A E + 0 0 136 -2,-0.3 2,-0.4 4,-0.2 3,-0.3 -0.855 48.1 56.7-125.1 166.6 35.3 2.7 26.9 57 356 A G S S- 0 0 24 -2,-0.3 -2,-0.1 1,-0.2 -29,-0.0 -0.931 111.1 -7.0 115.1-151.1 38.3 3.9 24.9 58 357 A E S S+ 0 0 114 -2,-0.4 -30,-1.6 1,-0.2 2,-0.5 0.801 142.3 41.0 -52.4 -39.3 38.2 5.6 21.4 59 358 A I E S-A 27 0A 45 -3,-0.3 2,-0.5 -32,-0.2 -32,-0.2 -0.989 78.3-172.3-112.6 117.9 34.5 5.0 21.4 60 359 A S E +A 26 0A 4 -34,-2.9 -34,-2.8 -2,-0.5 2,-0.4 -0.974 11.1 173.8-109.4 124.6 32.9 5.6 24.9 61 360 A E E +AB 25 55A 76 -6,-2.4 -7,-2.5 -2,-0.5 -6,-1.4 -0.976 19.3 87.6-133.5 141.9 29.3 4.5 25.0 62 361 A G E -AB 24 53A 1 -38,-2.0 -38,-2.2 -2,-0.4 2,-0.4 -0.999 57.0 -68.4 168.6-162.9 26.9 4.4 28.0 63 362 A a E -AB 23 52A 9 -11,-2.3 -11,-3.0 -2,-0.3 2,-0.7 -0.975 14.3-145.3-130.9 139.7 24.4 5.9 30.3 64 363 A L E -AB 22 51A 0 -42,-2.3 -42,-2.0 -2,-0.4 2,-0.4 -0.923 43.9-151.9 -92.5 116.3 24.3 8.5 33.0 65 364 A L E -AB 21 50A 20 -15,-3.6 -15,-1.9 -2,-0.7 2,-0.5 -0.778 18.4-159.2-102.3 142.8 21.7 6.7 35.2 66 365 A F E -AB 20 49A 0 -46,-2.6 -46,-2.0 -2,-0.4 2,-0.7 -0.955 0.9-166.1-122.0 116.2 19.1 8.1 37.7 67 366 A N E S-A 19 0A 20 -19,-3.0 -48,-0.1 -2,-0.5 -20,-0.1 -0.916 80.3 -18.4-101.9 111.3 17.7 5.9 40.4 68 367 A K S S- 0 0 163 -2,-0.7 -1,-0.2 -50,-0.5 -49,-0.1 0.976 83.9-167.6 58.8 61.8 14.6 7.7 41.9 69 368 A P - 0 0 12 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.370 5.1-148.9 -72.4 162.6 15.3 11.2 40.7 70 369 A T > - 0 0 67 27,-0.1 3,-1.1 -2,-0.1 27,-0.3 -0.469 39.2 -85.9-115.8-168.2 13.3 14.1 42.1 71 370 A H G > S+ 0 0 48 1,-0.2 3,-1.7 2,-0.2 25,-0.1 0.749 124.1 71.3 -73.1 -21.1 12.2 17.5 40.4 72 371 A Y G 3 S+ 0 0 181 1,-0.3 -1,-0.2 24,-0.0 27,-0.0 0.651 88.3 62.7 -65.6 -18.8 15.6 18.8 41.5 73 372 A N G < S+ 0 0 20 -3,-1.1 -1,-0.3 2,-0.0 -2,-0.2 0.556 82.8 109.4 -82.6 -8.1 17.1 16.5 38.8 74 373 A N < + 0 0 17 -3,-1.7 2,-0.2 -4,-0.1 21,-0.2 -0.249 54.3 52.8 -66.1 150.3 15.2 18.5 36.2 75 374 A G E S- E 0 94B 12 19,-2.2 19,-3.1 2,-0.0 2,-0.2 -0.707 87.6 -17.1 127.3-167.6 17.2 20.8 33.9 76 375 A N E - E 0 93B 70 -2,-0.2 -37,-2.5 17,-0.2 2,-0.4 -0.517 45.1-164.2 -80.8 137.8 20.1 20.9 31.5 77 376 A Y E -CE 38 92B 2 15,-2.7 15,-2.5 -39,-0.2 2,-0.4 -0.997 8.0-166.6-124.0 127.3 22.8 18.2 31.4 78 377 A T E -CE 37 91B 13 -41,-2.1 -41,-2.0 -2,-0.4 2,-0.6 -0.927 9.4-154.9-117.6 135.3 26.0 19.0 29.6 79 378 A L E -CE 36 90B 24 11,-2.5 11,-1.4 -2,-0.4 2,-0.4 -0.955 10.3-169.0-114.4 116.3 28.6 16.5 28.7 80 379 A I E -CE 35 89B 50 -45,-2.8 -45,-2.5 -2,-0.6 2,-0.4 -0.877 4.5-175.4-103.3 128.9 32.1 17.9 28.3 81 380 A A E -CE 34 88B 11 7,-3.1 7,-1.3 -2,-0.4 2,-0.4 -0.996 6.4-176.7-128.7 127.0 34.7 15.6 26.7 82 381 A K E +CE 33 87B 122 -49,-1.8 -49,-2.6 -2,-0.4 5,-0.2 -0.965 14.3 161.8-133.1 144.3 38.4 16.7 26.4 83 382 A N E > - E 0 86B 26 3,-2.9 3,-2.3 -2,-0.4 -2,-0.0 -0.911 57.9 -88.1-143.8 162.7 41.7 15.4 25.0 84 383 A P T 3 S+ 0 0 124 0, 0.0 3,-0.1 0, 0.0 -2,-0.0 0.653 126.6 53.1 -51.2 -18.9 45.0 17.1 24.1 85 384 A L T 3 S- 0 0 147 1,-0.2 2,-0.3 -55,-0.1 -3,-0.0 0.586 123.8 -49.0 -93.3 -8.9 43.7 17.9 20.6 86 385 A G E < -E 83 0B 34 -3,-2.3 -3,-2.9 2,-0.0 2,-0.3 -0.999 46.1-101.7 170.0-172.7 40.5 19.5 21.9 87 386 A T E -E 82 0B 91 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.890 23.7-169.9-139.1 157.5 37.3 19.8 23.9 88 387 A A E -E 81 0B 57 -7,-1.3 -7,-3.1 -2,-0.3 2,-0.3 -0.963 2.3-175.1-150.9 147.0 33.7 19.2 23.1 89 388 A N E -E 80 0B 107 -2,-0.3 2,-0.4 -9,-0.2 -9,-0.2 -0.990 2.4-177.8-148.0 139.3 30.4 19.9 25.0 90 389 A Q E -E 79 0B 144 -11,-1.4 -11,-2.5 -2,-0.3 2,-0.4 -0.994 12.4-151.2-136.9 143.1 26.8 19.1 24.2 91 390 A T E +E 78 0B 61 -2,-0.4 2,-0.3 -13,-0.2 -13,-0.2 -0.875 13.1 178.0-123.4 135.4 23.7 20.0 26.2 92 391 A I E -E 77 0B 79 -15,-2.5 -15,-2.7 -2,-0.4 2,-0.5 -0.893 28.7-120.1-125.6 159.6 20.4 18.2 26.6 93 392 A N E -E 76 0B 116 -2,-0.3 2,-0.5 -17,-0.2 -17,-0.2 -0.922 25.1-161.6-101.7 127.8 17.3 19.0 28.6 94 393 A G E -E 75 0B 7 -19,-3.1 -19,-2.2 -2,-0.5 2,-0.5 -0.958 8.1-174.8-111.0 126.6 16.2 16.3 31.1 95 394 A H + 0 0 136 -2,-0.5 3,-0.1 -21,-0.2 -21,-0.1 -0.981 17.4 155.0-119.8 117.6 12.7 16.3 32.5 96 395 A F + 0 0 21 -2,-0.5 2,-0.3 1,-0.4 -1,-0.1 0.814 63.2 1.2-105.2 -52.3 12.1 13.7 35.2 97 396 A L S S- 0 0 96 -27,-0.3 -1,-0.4 -26,-0.1 -23,-0.1 -0.930 83.8 -79.8-139.2 160.2 9.3 14.9 37.4 98 397 A K - 0 0 147 -2,-0.3 -27,-0.1 -3,-0.1 -24,-0.0 -0.354 41.7-124.3 -63.4 137.6 6.8 17.8 37.7 99 398 A E - 0 0 110 -28,-0.1 -1,-0.1 1,-0.1 2,-0.0 -0.728 36.6-114.2 -80.7 124.1 8.2 21.1 39.3 100 399 A P - 0 0 56 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 -0.351 29.1-101.6 -65.2 148.6 5.9 21.9 42.3 101 400 A F - 0 0 187 1,-0.1 2,-0.1 2,-0.1 0, 0.0 -0.241 51.5 -89.9 -62.9 146.2 3.8 25.0 42.2 102 401 A P - 0 0 95 0, 0.0 -1,-0.1 0, 0.0 -3,-0.0 -0.389 28.5-158.3 -63.1 140.7 5.2 27.9 44.4 103 402 A V S S+ 0 0 136 -3,-0.1 2,-0.3 -2,-0.1 -2,-0.1 0.707 72.7 62.9 -89.0 -23.4 4.1 28.0 48.0 104 403 A D 0 0 139 1,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.817 360.0 360.0-109.3 149.5 5.0 31.7 48.6 105 404 A E 0 0 247 -2,-0.3 -1,-0.1 -3,-0.0 -2,-0.0 0.644 360.0 360.0 -43.9 360.0 3.5 34.9 46.9