==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN/RNA 05-JAN-05 1WWE . COMPND 2 MOLECULE: NUCLEOPROTEIN P10; . SOURCE 2 ORGANISM_SCIENTIFIC: MOLONEY MURINE LEUKEMIA VIRUS; . AUTHOR A.DEY,D.YORK,A.SMALLS-MANTEY,M.F.SUMMERS . 56 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6585.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 14 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 10.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 8.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 158 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 166.2 2.1 0.0 -1.2 2 2 A T + 0 0 131 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.846 360.0 168.7-103.9 136.3 4.8 2.4 -2.4 3 3 A V + 0 0 133 -2,-0.4 2,-0.4 2,-0.0 0, 0.0 -0.906 3.5 160.7-150.4 116.4 4.0 5.4 -4.6 4 4 A V - 0 0 131 -2,-0.3 2,-0.6 0, 0.0 -2,-0.0 -0.999 35.0-126.6-139.5 140.0 6.4 8.2 -5.4 5 5 A S - 0 0 118 -2,-0.4 3,-0.1 1,-0.1 -2,-0.0 -0.774 26.9-168.1 -89.9 119.6 6.4 10.8 -8.1 6 6 A G - 0 0 72 -2,-0.6 2,-0.3 1,-0.2 -1,-0.1 0.621 42.4 -45.7 -74.1-128.8 9.6 10.9 -10.1 7 7 A Q - 0 0 176 0, 0.0 2,-0.3 0, 0.0 -1,-0.2 -0.706 48.8-156.4-109.3 161.7 10.4 13.7 -12.5 8 8 A K + 0 0 160 -2,-0.3 3,-0.1 1,-0.1 -3,-0.0 -0.953 19.2 170.7-136.9 154.7 8.4 15.4 -15.2 9 9 A Q S S+ 0 0 201 -2,-0.3 2,-0.6 1,-0.1 -1,-0.1 0.622 78.8 25.6-125.5 -59.2 9.1 17.3 -18.4 10 10 A D S S- 0 0 144 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.864 83.4-137.3-118.1 94.9 6.0 17.9 -20.4 11 11 A R - 0 0 194 -2,-0.6 2,-0.2 1,-0.1 -3,-0.0 0.080 21.4-121.7 -43.1 160.1 2.9 17.9 -18.1 12 12 A Q + 0 0 146 2,-0.0 -1,-0.1 1,-0.0 0, 0.0 -0.613 49.0 135.6-106.7 167.9 -0.1 16.0 -19.3 13 13 A G - 0 0 65 -2,-0.2 2,-0.3 0, 0.0 -2,-0.0 0.294 28.8-165.1 153.0 59.4 -3.7 17.2 -19.9 14 14 A G + 0 0 81 2,-0.0 2,-0.2 1,-0.0 -2,-0.0 -0.480 27.2 144.6 -67.4 125.7 -5.2 15.9 -23.2 15 15 A E + 0 0 166 -2,-0.3 3,-0.1 1,-0.1 2,-0.0 -0.619 15.4 112.6-167.7 99.9 -8.3 17.8 -24.1 16 16 A R S S- 0 0 224 1,-0.3 -1,-0.1 -2,-0.2 -2,-0.0 -0.389 83.2 -36.3-174.0 85.1 -9.3 18.7 -27.6 17 17 A R - 0 0 196 1,-0.1 -1,-0.3 -2,-0.0 3,-0.1 0.655 46.5-164.2 63.9 130.8 -12.4 17.1 -29.1 18 18 A R > - 0 0 158 -3,-0.1 2,-2.7 1,-0.1 3,-2.2 -0.179 40.1-113.3-138.9 40.6 -13.3 13.5 -28.4 19 19 A S T 3 S- 0 0 76 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 -0.380 85.3 -38.0 64.1 -77.5 -15.8 12.6 -31.1 20 20 A Q T 3 S- 0 0 149 -2,-2.7 -1,-0.3 -3,-0.1 -3,-0.0 0.080 70.7-174.0-168.6 31.5 -18.6 12.3 -28.6 21 21 A L < - 0 0 64 -3,-2.2 2,-0.1 1,-0.1 6,-0.1 -0.135 21.8-147.2 -41.0 105.1 -17.1 10.6 -25.5 22 22 A D > - 0 0 68 1,-0.1 3,-2.2 4,-0.1 -1,-0.1 -0.450 21.2-116.6 -79.8 154.3 -20.3 10.1 -23.5 23 23 A R T 3 S+ 0 0 210 1,-0.3 -1,-0.1 -2,-0.1 -2,-0.1 0.585 122.0 42.4 -65.1 -9.1 -20.3 10.3 -19.8 24 24 A D T 3 S+ 0 0 73 2,-0.1 9,-1.8 11,-0.0 -1,-0.3 -0.083 102.1 95.0-126.6 30.3 -21.3 6.6 -20.0 25 25 A Q B < S-A 32 0A 31 -3,-2.2 2,-0.4 7,-0.2 11,-0.3 -0.539 72.5-111.3-113.4-179.8 -18.9 5.6 -22.7 26 26 A C - 0 0 0 5,-2.0 4,-0.2 9,-0.2 9,-0.1 -0.965 9.7-161.5-119.4 132.0 -15.5 4.1 -22.9 27 27 A A S S+ 0 0 60 -2,-0.4 8,-0.1 3,-0.1 -1,-0.0 -0.175 88.2 53.4-101.4 37.4 -12.4 6.0 -24.1 28 28 A Y S S+ 0 0 110 3,-0.1 -1,-0.1 14,-0.0 7,-0.0 0.566 127.5 6.3-132.1 -52.8 -10.5 2.8 -24.7 29 29 A C S S- 0 0 57 2,-0.1 -2,-0.1 0, 0.0 7,-0.0 0.587 98.1-114.4-109.7 -22.1 -12.6 0.5 -26.9 30 30 A K + 0 0 108 1,-0.2 2,-0.1 -4,-0.2 -3,-0.1 0.696 61.8 156.0 91.6 24.5 -15.3 2.9 -27.7 31 31 A E - 0 0 98 -6,-0.1 -5,-2.0 3,-0.0 2,-0.6 -0.451 39.8-132.2 -82.3 156.7 -17.9 0.9 -25.8 32 32 A K B S+A 25 0A 133 -7,-0.2 -7,-0.2 -2,-0.1 3,-0.1 -0.947 84.3 30.6-115.6 113.7 -21.1 2.3 -24.4 33 33 A G S S+ 0 0 57 -9,-1.8 2,-0.2 -2,-0.6 -8,-0.1 -0.319 105.5 62.4 141.5 -53.0 -21.9 1.3 -20.8 34 34 A H S S- 0 0 44 1,-0.0 -1,-0.5 2,-0.0 2,-0.2 -0.572 77.4-118.5-100.5 165.7 -18.6 0.7 -19.1 35 35 A W > - 0 0 114 -2,-0.2 3,-1.7 -9,-0.1 -9,-0.2 -0.625 25.0-112.5-101.1 162.1 -15.8 3.1 -18.4 36 36 A A G > S+ 0 0 21 -11,-0.3 3,-1.7 1,-0.3 5,-0.1 0.874 122.2 56.1 -59.1 -38.8 -12.2 2.9 -19.7 37 37 A K G 3 S+ 0 0 156 1,-0.3 -1,-0.3 5,-0.0 -11,-0.0 0.574 116.3 38.4 -69.5 -8.4 -11.1 2.3 -16.2 38 38 A D G < S+ 0 0 107 -3,-1.7 -1,-0.3 3,-0.0 -2,-0.2 0.093 85.7 138.7-126.1 17.3 -13.5 -0.6 -16.3 39 39 A C X - 0 0 0 -3,-1.7 3,-1.5 1,-0.1 -3,-0.1 -0.494 51.0-145.1 -68.8 130.5 -12.8 -1.6 -19.9 40 40 A P T 3 S+ 0 0 101 0, 0.0 -1,-0.1 0, 0.0 4,-0.1 0.444 99.9 63.8 -75.0 0.4 -12.7 -5.4 -20.2 41 41 A K T 3 S+ 0 0 150 -5,-0.1 -2,-0.1 2,-0.1 -5,-0.0 0.204 78.1 122.9-105.8 11.3 -10.0 -4.8 -22.8 42 42 A K S < S- 0 0 76 -3,-1.5 2,-2.7 1,-0.1 -5,-0.0 -0.379 80.6-104.1 -73.4 153.4 -7.7 -3.3 -20.2 43 43 A P S S+ 0 0 75 0, 0.0 2,-0.4 0, 0.0 7,-0.2 -0.293 86.6 111.6 -74.9 55.8 -4.2 -4.8 -19.6 44 44 A R - 0 0 125 -2,-2.7 3,-0.1 5,-0.1 -2,-0.1 -0.990 55.3 -39.2-134.0 140.9 -5.4 -6.4 -16.4 45 45 A G + 0 0 47 -2,-0.4 2,-0.2 1,-0.2 -1,-0.0 0.125 53.9 129.9 60.9 176.9 -5.9 -10.0 -15.5 46 46 A P S S- 0 0 128 0, 0.0 2,-0.3 0, 0.0 -1,-0.2 -0.802 108.9 -31.8 -75.0 -35.6 -6.6 -12.7 -15.6 47 47 A R S S+ 0 0 240 1,-0.2 -3,-0.0 -2,-0.2 0, 0.0 -0.932 109.5 57.4-146.4 117.4 -3.2 -13.5 -14.2 48 48 A G - 0 0 52 -2,-0.3 2,-1.6 1,-0.0 -1,-0.2 0.529 59.3-146.1 125.5 81.6 0.0 -11.6 -14.8 49 49 A P + 0 0 128 0, 0.0 -5,-0.1 0, 0.0 -1,-0.0 -0.568 60.2 110.7 -74.9 89.3 0.2 -7.9 -13.9 50 50 A R - 0 0 209 -2,-1.6 -6,-0.0 -7,-0.2 0, 0.0 -0.603 44.5-168.3-166.2 96.7 2.4 -6.6 -16.6 51 51 A P + 0 0 72 0, 0.0 -9,-0.0 0, 0.0 -7,-0.0 0.022 60.2 53.4 -75.0-173.0 1.2 -4.3 -19.4 52 52 A Q S S- 0 0 181 1,-0.1 2,-0.0 2,-0.0 0, 0.0 0.937 82.9-132.6 45.2 88.9 3.1 -3.4 -22.6 53 53 A T - 0 0 118 1,-0.1 3,-0.1 3,-0.0 -1,-0.1 -0.309 20.6-167.7 -68.2 152.6 4.0 -6.8 -24.0 54 54 A S + 0 0 130 1,-0.2 2,-0.3 -2,-0.0 -1,-0.1 0.807 69.7 51.6-105.4 -54.4 7.5 -7.5 -25.2 55 55 A L 0 0 151 1,-0.1 -1,-0.2 0, 0.0 -2,-0.0 -0.648 360.0 360.0 -89.0 144.6 7.3 -10.7 -27.1 56 56 A L 0 0 212 -2,-0.3 -1,-0.1 -3,-0.1 -3,-0.0 0.358 360.0 360.0 -84.4 360.0 4.8 -11.1 -29.9