==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-DEC-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN/RNA 05-JAN-05 1WWF . COMPND 2 MOLECULE: NUCLEOPROTEIN P10; . SOURCE 2 ORGANISM_SCIENTIFIC: MOLONEY MURINE LEUKEMIA VIRUS; . AUTHOR A.DEY,D.YORK,A.SMALLS-MANTEY,M.F.SUMMERS . 56 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6954.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 14 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 10.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 8.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 147 0, 0.0 2,-0.6 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 171.5 2.1 0.0 -1.2 2 2 A T + 0 0 136 1,-0.2 3,-0.1 3,-0.0 0, 0.0 -0.857 360.0 122.9 -99.2 116.9 5.6 1.2 -2.0 3 3 A V + 0 0 142 -2,-0.6 2,-0.4 1,-0.5 -1,-0.2 0.526 64.5 44.7-132.3 -63.1 5.9 4.9 -2.5 4 4 A V + 0 0 133 0, 0.0 -1,-0.5 0, 0.0 2,-0.3 -0.750 62.7 156.5 -94.7 138.9 8.4 6.4 -0.0 5 5 A S - 0 0 105 -2,-0.4 -3,-0.0 -3,-0.1 0, 0.0 -0.874 33.4-127.2-164.6 127.5 11.7 4.7 0.6 6 6 A G - 0 0 72 -2,-0.3 2,-0.4 1,-0.1 0, 0.0 -0.023 23.3-127.1 -66.5 176.1 15.1 6.0 1.8 7 7 A Q - 0 0 166 2,-0.0 2,-0.6 0, 0.0 -1,-0.1 -0.996 12.7-162.8-134.8 129.1 18.4 5.4 0.0 8 8 A K + 0 0 194 -2,-0.4 2,-0.6 2,-0.0 -2,-0.0 -0.916 13.5 175.3-114.7 105.1 21.6 3.9 1.4 9 9 A Q - 0 0 153 -2,-0.6 2,-0.9 2,-0.0 -2,-0.0 -0.919 9.9-168.5-114.5 106.8 24.6 4.6 -0.7 10 10 A D - 0 0 156 -2,-0.6 2,-0.1 2,-0.0 -2,-0.0 -0.830 14.1-151.4 -97.7 103.1 27.9 3.4 0.8 11 11 A R + 0 0 219 -2,-0.9 2,-0.3 2,-0.0 -2,-0.0 -0.460 31.4 141.7 -74.1 144.2 30.7 4.9 -1.2 12 12 A Q + 0 0 194 -2,-0.1 2,-0.1 1,-0.0 -2,-0.0 -0.888 22.6 61.2-178.7 148.6 34.0 3.0 -1.5 13 13 A G + 0 0 77 -2,-0.3 -1,-0.0 1,-0.1 -2,-0.0 -0.185 25.8 168.6 108.6 158.6 36.8 2.1 -3.9 14 14 A G + 0 0 69 -2,-0.1 -1,-0.1 1,-0.0 0, 0.0 0.146 33.4 115.9 155.6 75.4 39.4 4.1 -5.8 15 15 A E + 0 0 192 2,-0.0 2,-0.3 0, 0.0 -1,-0.0 -0.412 54.9 71.3-157.5 70.3 42.2 2.2 -7.5 16 16 A R S S- 0 0 176 2,-0.0 2,-0.5 0, 0.0 0, 0.0 -0.970 74.5 -93.5-171.2 170.8 42.1 2.5 -11.3 17 17 A R - 0 0 186 -2,-0.3 2,-1.2 1,-0.1 -2,-0.0 -0.869 20.0-143.3-104.1 131.1 42.6 4.8 -14.2 18 18 A R > - 0 0 180 -2,-0.5 3,-2.3 3,-0.1 2,-0.2 -0.264 25.1-167.3 -84.9 48.3 39.7 6.7 -15.7 19 19 A S T 3 S- 0 0 94 -2,-1.2 3,-0.3 1,-0.3 -2,-0.0 -0.136 74.0 -42.4 -41.7 96.3 41.2 6.2 -19.2 20 20 A Q T 3 S- 0 0 162 -2,-0.2 -1,-0.3 1,-0.2 2,-0.2 0.871 80.6-141.5 38.1 52.5 38.9 8.7 -21.0 21 21 A L < - 0 0 80 -3,-2.3 -1,-0.2 1,-0.1 2,-0.1 -0.214 16.7-130.8 -46.0 102.4 36.0 7.4 -18.9 22 22 A D > - 0 0 63 -3,-0.3 3,-2.2 -2,-0.2 -1,-0.1 -0.378 2.5-134.6 -62.1 133.9 33.3 7.5 -21.6 23 23 A R T 3 S+ 0 0 197 1,-0.3 -1,-0.2 -2,-0.1 -2,-0.1 0.584 111.4 43.1 -65.4 -9.0 30.2 9.2 -20.3 24 24 A D T 3 S+ 0 0 106 2,-0.1 9,-2.0 11,-0.0 -1,-0.3 -0.082 101.1 96.8-125.8 30.1 28.4 6.3 -22.0 25 25 A Q B < S-A 32 0A 54 -3,-2.2 2,-0.5 7,-0.2 11,-0.4 -0.551 75.5-104.7-112.3 178.3 30.8 3.6 -20.8 26 26 A C - 0 0 0 5,-1.3 4,-0.2 9,-0.2 9,-0.1 -0.923 13.7-161.6-110.2 129.5 30.8 1.1 -18.0 27 27 A A S S+ 0 0 59 -2,-0.5 -1,-0.1 3,-0.1 8,-0.1 -0.109 87.9 51.1 -97.6 33.6 33.1 1.6 -15.0 28 28 A Y S S+ 0 0 109 3,-0.1 -1,-0.1 14,-0.0 7,-0.0 0.578 127.1 8.7-129.3 -62.3 32.7 -2.0 -14.0 29 29 A C S S- 0 0 45 2,-0.1 -2,-0.1 13,-0.0 3,-0.1 0.613 98.5-116.7 -99.0 -19.5 33.5 -4.4 -16.9 30 30 A K + 0 0 98 1,-0.3 2,-0.3 -4,-0.2 -3,-0.1 0.685 61.5 154.6 88.5 22.4 34.7 -1.6 -19.1 31 31 A E - 0 0 104 -6,-0.1 -5,-1.3 3,-0.1 2,-0.5 -0.653 38.9-136.4 -86.6 139.3 31.9 -2.2 -21.6 32 32 A K B S+A 25 0A 146 -2,-0.3 -7,-0.2 -7,-0.2 3,-0.1 -0.851 83.1 38.2 -99.3 125.8 30.7 0.7 -23.8 33 33 A G S S+ 0 0 69 -9,-2.0 2,-0.3 -2,-0.5 -1,-0.2 -0.204 105.8 61.2 133.0 -41.4 27.0 1.1 -24.2 34 34 A H S S- 0 0 35 -3,-0.2 -1,-0.3 2,-0.0 2,-0.2 -0.820 77.6-120.6-116.6 156.5 25.7 0.3 -20.7 35 35 A W > - 0 0 120 -2,-0.3 3,-2.1 -9,-0.1 -9,-0.2 -0.557 26.3-114.2 -92.5 159.5 26.4 2.0 -17.4 36 36 A A G > S+ 0 0 15 -11,-0.4 3,-1.9 1,-0.3 6,-0.1 0.849 120.1 61.1 -59.3 -35.3 27.9 0.2 -14.4 37 37 A K G 3 S+ 0 0 167 1,-0.3 -1,-0.3 5,-0.0 -11,-0.0 0.591 115.8 34.3 -67.4 -9.5 24.6 0.7 -12.6 38 38 A D G < S+ 0 0 126 -3,-2.1 -1,-0.3 0, 0.0 -2,-0.2 0.009 84.8 150.6-131.7 23.8 23.3 -1.4 -15.5 39 39 A C X - 0 0 8 -3,-1.9 3,-1.2 1,-0.2 -3,-0.1 -0.447 41.1-149.5 -63.6 124.8 26.3 -3.7 -15.9 40 40 A P T 3 S+ 0 0 106 0, 0.0 -1,-0.2 0, 0.0 -4,-0.1 0.442 96.9 63.7 -75.0 0.5 25.0 -7.0 -17.2 41 41 A K T 3 S+ 0 0 157 -5,-0.1 -2,-0.1 2,-0.1 -5,-0.0 0.615 78.8 108.5 -95.7 -18.3 28.0 -8.5 -15.4 42 42 A K S < S- 0 0 83 -3,-1.2 2,-0.1 -6,-0.1 -5,-0.0 -0.204 78.5-101.8 -58.7 151.4 26.6 -7.4 -12.0 43 43 A P - 0 0 106 0, 0.0 -1,-0.1 0, 0.0 4,-0.1 -0.341 40.6 -96.4 -75.0 157.8 25.3 -10.2 -9.7 44 44 A R - 0 0 228 2,-0.1 3,-0.1 -2,-0.1 0, 0.0 -0.153 58.5 -63.5 -67.9 167.1 21.6 -10.8 -9.3 45 45 A G S S+ 0 0 60 1,-0.2 2,-0.1 3,-0.0 -1,-0.0 -0.920 88.4 11.7-153.7 175.9 19.6 -9.4 -6.5 46 46 A P S S+ 0 0 137 0, 0.0 -1,-0.2 0, 0.0 2,-0.1 0.385 88.9 115.5 -75.0 137.4 18.4 -8.7 -4.0 47 47 A R + 0 0 225 -2,-0.1 0, 0.0 -4,-0.1 0, 0.0 -0.459 31.2 162.0-170.8 88.0 21.5 -10.4 -2.6 48 48 A G - 0 0 45 -2,-0.1 2,-0.1 1,-0.1 -3,-0.0 -0.786 39.4-102.0-113.4 157.1 24.1 -8.4 -0.6 49 49 A P - 0 0 132 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.384 32.4-138.5 -75.0 153.5 26.8 -9.5 1.8 50 50 A R - 0 0 208 1,-0.1 0, 0.0 -2,-0.1 0, 0.0 -0.880 9.1-146.7-116.0 147.4 26.4 -9.2 5.5 51 51 A P - 0 0 124 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.904 26.8-171.7 -75.0 -44.5 28.9 -8.0 8.1 52 52 A Q - 0 0 171 1,-0.1 2,-0.2 0, 0.0 -2,-0.0 0.928 14.4-143.4 46.9 94.3 27.6 -10.2 10.9 53 53 A T + 0 0 130 3,-0.0 2,-0.1 1,-0.0 -1,-0.1 -0.605 29.0 164.4 -88.0 147.7 29.4 -9.1 14.0 54 54 A S - 0 0 108 1,-0.7 -1,-0.0 -2,-0.2 0, 0.0 -0.572 58.4 -39.2-166.3 93.7 30.5 -11.6 16.7 55 55 A L 0 0 161 1,-0.2 -1,-0.7 -2,-0.1 0, 0.0 0.393 360.0 360.0 62.9 152.7 33.1 -10.6 19.3 56 56 A L 0 0 219 -3,-0.1 -1,-0.2 0, 0.0 -3,-0.0 -0.425 360.0 360.0 61.3 360.0 36.1 -8.5 18.5