==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN/RNA 05-JAN-05 1WWG . COMPND 2 MOLECULE: NUCLEOPROTEIN P10; . SOURCE 2 ORGANISM_SCIENTIFIC: MOLONEY MURINE LEUKEMIA VIRUS; . AUTHOR A.DEY,D.YORK,A.SMALLS-MANTEY,M.F.SUMMERS . 56 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6547.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 11 19.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 8.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 155 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 173.2 2.1 0.0 -1.2 2 2 A T + 0 0 136 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.802 360.0 114.4-158.6 110.4 0.8 0.0 -4.8 3 3 A V - 0 0 111 -2,-0.3 4,-0.1 1,-0.1 0, 0.0 -0.943 34.4-166.3-171.8 153.4 2.2 -2.0 -7.7 4 4 A V S S- 0 0 130 2,-0.3 3,-0.1 -2,-0.3 -1,-0.1 0.708 82.8 -29.7-113.6 -43.1 1.3 -4.8 -10.1 5 5 A S S S- 0 0 88 1,-0.5 -2,-0.0 2,-0.1 0, 0.0 -0.355 83.7 -84.5 177.6 92.4 4.7 -5.7 -11.6 6 6 A G + 0 0 59 -2,-0.1 -1,-0.5 2,-0.0 -2,-0.3 -0.045 68.0 140.1 38.5-127.3 7.5 -3.3 -12.0 7 7 A Q - 0 0 168 1,-0.1 -2,-0.1 -3,-0.1 -3,-0.1 0.580 25.8-174.1 65.6 136.7 7.0 -1.4 -15.3 8 8 A K + 0 0 210 2,-0.0 2,-0.3 0, 0.0 -1,-0.1 -0.320 36.3 117.0-161.9 65.1 7.8 2.3 -15.6 9 9 A Q + 0 0 173 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.921 25.7 166.5-135.2 159.7 6.7 3.6 -18.9 10 10 A D + 0 0 152 -2,-0.3 2,-0.3 0, 0.0 -2,-0.0 -0.861 4.5 156.1-173.3 137.3 4.3 6.2 -20.3 11 11 A R - 0 0 215 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.941 25.8-160.0-167.0 144.9 3.6 7.9 -23.6 12 12 A Q - 0 0 164 -2,-0.3 -1,-0.1 0, 0.0 2,-0.1 0.913 39.0-141.1 -91.4 -60.8 0.8 9.6 -25.4 13 13 A G - 0 0 51 0, 0.0 3,-0.1 0, 0.0 2,-0.1 -0.047 21.5-171.2 108.2 149.7 1.9 9.7 -29.0 14 14 A G + 0 0 60 1,-0.4 0, 0.0 -2,-0.1 0, 0.0 0.045 58.1 49.2-135.2-115.0 1.7 12.1 -31.9 15 15 A E + 0 0 179 -2,-0.1 -1,-0.4 1,-0.0 2,-0.1 -0.060 64.2 138.9 -38.9 126.2 2.5 11.8 -35.6 16 16 A R - 0 0 165 -3,-0.1 -1,-0.0 3,-0.0 0, 0.0 -0.463 45.5-133.9-179.3 98.9 0.9 8.6 -36.8 17 17 A R - 0 0 195 1,-0.1 3,-0.1 -2,-0.1 2,-0.1 -0.219 17.8-129.3 -57.7 146.6 -0.9 8.3 -40.1 18 18 A R > - 0 0 146 1,-0.3 3,-2.3 3,-0.1 -1,-0.1 -0.128 38.6-139.4 -90.3 36.7 -4.3 6.5 -40.0 19 19 A S T 3 - 0 0 53 1,-0.3 -1,-0.3 -2,-0.1 2,-0.1 0.051 60.0 -36.3 38.2-148.1 -3.2 4.2 -42.8 20 20 A Q T 3 S- 0 0 163 -3,-0.1 -1,-0.3 2,-0.0 -3,-0.0 -0.198 74.8-174.0 -95.7 40.3 -5.9 3.5 -45.3 21 21 A L < - 0 0 71 -3,-2.3 2,-0.2 1,-0.1 6,-0.1 -0.119 15.2-150.7 -40.0 102.2 -8.6 3.5 -42.7 22 22 A D > - 0 0 75 1,-0.1 3,-2.1 4,-0.1 -1,-0.1 -0.492 22.3-119.3 -81.6 152.5 -11.5 2.5 -44.8 23 23 A R T 3 S+ 0 0 207 1,-0.3 -1,-0.1 -2,-0.2 -2,-0.1 0.568 120.9 40.3 -66.1 -7.7 -15.0 3.6 -44.0 24 24 A D T 3 S+ 0 0 84 2,-0.1 9,-2.0 11,-0.0 -1,-0.3 -0.060 103.4 93.8-129.4 28.7 -15.7 -0.1 -43.7 25 25 A Q B < S-A 32 0A 38 -3,-2.1 2,-0.5 7,-0.2 11,-0.4 -0.471 76.1-102.5-111.7-175.8 -12.5 -1.1 -41.9 26 26 A C - 0 0 2 5,-2.7 4,-0.2 9,-0.2 9,-0.1 -0.947 13.2-161.8-115.4 131.5 -11.4 -1.6 -38.3 27 27 A A S S+ 0 0 57 -2,-0.5 8,-0.1 3,-0.1 -1,-0.1 -0.105 88.5 50.0 -99.5 33.0 -9.4 1.0 -36.5 28 28 A Y S S+ 0 0 109 3,-0.1 -1,-0.1 14,-0.0 7,-0.0 0.572 126.2 11.4-129.7 -62.5 -8.3 -1.5 -33.9 29 29 A C S S- 0 0 50 2,-0.1 -2,-0.1 0, 0.0 7,-0.0 0.664 99.1-117.7 -94.9 -22.9 -7.0 -4.7 -35.4 30 30 A K + 0 0 121 1,-0.2 -3,-0.1 -4,-0.2 2,-0.1 0.694 62.7 151.0 90.5 24.0 -6.8 -3.2 -38.9 31 31 A E - 0 0 97 3,-0.1 -5,-2.7 -6,-0.1 2,-0.5 -0.355 41.6-131.1 -83.8 166.7 -9.3 -5.7 -40.3 32 32 A K B S+A 25 0A 161 -7,-0.3 -7,-0.2 -2,-0.1 3,-0.1 -0.982 82.8 35.0-125.6 120.8 -11.7 -5.0 -43.1 33 33 A G S S+ 0 0 66 -9,-2.0 2,-0.3 -2,-0.5 -8,-0.1 -0.156 105.5 63.0 134.2 -38.3 -15.4 -5.8 -42.9 34 34 A H S S- 0 0 21 2,-0.0 -1,-0.4 -8,-0.0 2,-0.2 -0.820 77.2-120.7-117.2 157.3 -16.1 -5.0 -39.3 35 35 A W > - 0 0 123 -2,-0.3 3,-1.7 -9,-0.1 -9,-0.2 -0.566 26.4-113.9 -93.5 159.5 -15.9 -1.8 -37.4 36 36 A A G > S+ 0 0 11 -11,-0.4 3,-2.2 1,-0.3 6,-0.2 0.894 121.4 56.5 -57.3 -42.2 -13.7 -1.2 -34.3 37 37 A K G 3 S+ 0 0 157 1,-0.3 -1,-0.3 3,-0.0 -11,-0.1 0.618 116.2 38.5 -64.9 -11.6 -16.9 -0.8 -32.2 38 38 A D G < S+ 0 0 123 -3,-1.7 -1,-0.3 3,-0.0 -2,-0.2 0.086 85.6 143.0-123.5 17.9 -17.7 -4.3 -33.6 39 39 A C X - 0 0 7 -3,-2.2 3,-1.1 1,-0.2 -3,-0.1 -0.438 49.0-144.8 -64.4 129.7 -14.1 -5.6 -33.4 40 40 A P T 3 S+ 0 0 104 0, 0.0 -1,-0.2 0, 0.0 -4,-0.1 0.435 99.7 63.4 -75.1 1.0 -14.2 -9.3 -32.4 41 41 A K T 3 S+ 0 0 152 -5,-0.1 -2,-0.1 2,-0.0 -5,-0.0 0.636 77.2 99.5 -95.9 -20.2 -11.0 -8.5 -30.5 42 42 A K < - 0 0 84 -3,-1.1 3,-0.1 -6,-0.2 -14,-0.0 -0.596 49.8-176.9 -73.2 114.0 -12.7 -6.1 -28.2 43 43 A P - 0 0 87 0, 0.0 2,-0.3 0, 0.0 -1,-0.2 0.962 62.5 -30.3 -75.1 -56.3 -13.4 -8.0 -25.0 44 44 A R S S- 0 0 198 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.946 76.7 -84.7-165.6 144.4 -15.3 -5.3 -23.1 45 45 A G S S+ 0 0 58 -2,-0.3 2,-0.2 -3,-0.1 3,-0.0 -0.780 76.9 31.1-132.9 176.2 -15.4 -1.5 -22.9 46 46 A P S S- 0 0 141 0, 0.0 2,-0.3 0, 0.0 -1,-0.0 0.580 71.1-160.7 -75.0 162.4 -14.9 1.1 -22.2 47 47 A R + 0 0 184 -2,-0.2 3,-0.1 1,-0.1 -2,-0.1 -0.797 55.6 47.8-109.0 151.3 -11.2 0.6 -21.7 48 48 A G - 0 0 53 -2,-0.3 2,-1.4 1,-0.1 -1,-0.1 0.934 69.3-140.0 84.7 81.0 -8.8 2.7 -19.8 49 49 A P + 0 0 129 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.585 39.6 155.8 -75.0 93.7 -10.3 3.7 -16.4 50 50 A R - 0 0 179 -2,-1.4 2,-2.6 -3,-0.1 -3,-0.0 -0.860 30.1-161.5-126.2 95.5 -9.1 7.3 -16.1 51 51 A P + 0 0 129 0, 0.0 2,-0.5 0, 0.0 0, 0.0 -0.436 44.2 134.1 -74.9 70.0 -11.3 9.4 -13.8 52 52 A Q + 0 0 120 -2,-2.6 2,-1.6 1,-0.0 -2,-0.0 -0.785 27.9 176.9-124.5 86.2 -10.1 12.7 -15.2 53 53 A T + 0 0 129 -2,-0.5 2,-0.2 1,-0.1 -1,-0.0 -0.524 51.1 97.4 -88.6 68.5 -13.0 15.0 -15.9 54 54 A S + 0 0 87 -2,-1.6 -1,-0.1 2,-0.1 0, 0.0 -0.620 59.4 59.6-158.5 90.0 -11.0 17.9 -17.1 55 55 A L 0 0 166 -2,-0.2 -2,-0.1 0, 0.0 0, 0.0 0.004 360.0 360.0-171.5 -64.0 -10.5 18.5 -20.8 56 56 A L 0 0 194 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 -0.067 360.0 360.0 46.4 360.0 -13.7 19.0 -22.7