==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 26-JAN-05 1WXM . COMPND 2 MOLECULE: A-RAF PROTO-ONCOGENE SERINE/THREONINE-PROTEIN . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.ZHAO,N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 86 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5997.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 57.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.7 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 19 22.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 15.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 93 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 158.5 5.5 -5.2 -14.2 2 2 A S + 0 0 137 1,-0.1 2,-0.1 2,-0.1 0, 0.0 -0.129 360.0 150.6 -41.7 117.4 8.7 -7.0 -15.1 3 3 A S - 0 0 80 2,-0.0 2,-2.2 0, 0.0 -1,-0.1 -0.579 29.2-167.4-159.1 86.8 11.0 -6.5 -12.1 4 4 A G + 0 0 97 -2,-0.1 2,-0.4 2,-0.0 -2,-0.1 -0.506 44.7 128.7 -78.6 74.4 13.5 -9.3 -11.4 5 5 A S + 0 0 91 -2,-2.2 2,-0.4 2,-0.0 -2,-0.0 -0.995 30.8 177.8-135.6 128.3 14.4 -8.0 -8.0 6 6 A S + 0 0 133 -2,-0.4 2,-0.2 2,-0.0 -2,-0.0 -0.976 32.8 95.9-134.6 119.2 14.5 -10.0 -4.7 7 7 A G S S- 0 0 67 -2,-0.4 2,-0.3 2,-0.2 65,-0.1 -0.634 82.3 -48.6-161.8-139.7 15.6 -8.5 -1.4 8 8 A G S S+ 0 0 49 -2,-0.2 16,-0.8 63,-0.1 2,-0.3 -0.567 96.1 83.2-119.1 65.9 14.1 -7.0 1.8 9 9 A T E -A 23 0A 68 -2,-0.3 63,-0.4 14,-0.2 2,-0.3 -0.939 57.2-139.1-154.6 172.4 11.7 -4.4 0.4 10 10 A V E -A 22 0A 10 12,-2.8 12,-3.0 -2,-0.3 2,-0.5 -0.989 17.5-125.3-142.0 147.8 8.2 -3.9 -0.9 11 11 A K E -Ab 21 74A 55 62,-0.9 64,-1.3 -2,-0.3 2,-0.5 -0.812 20.9-160.9 -96.9 131.1 6.7 -1.8 -3.7 12 12 A V E -Ab 20 75A 2 8,-2.5 8,-2.7 -2,-0.5 2,-0.7 -0.958 6.2-150.6-116.1 121.5 3.9 0.6 -2.8 13 13 A Y E -Ab 19 76A 74 62,-2.6 64,-3.4 -2,-0.5 6,-0.3 -0.819 15.1-159.0 -94.9 112.3 1.6 1.9 -5.5 14 14 A L - 0 0 15 4,-2.6 4,-0.4 -2,-0.7 3,-0.3 -0.433 28.7-117.0 -85.7 162.7 0.3 5.3 -4.8 15 15 A P S S+ 0 0 41 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 0.535 105.9 80.9 -75.0 -6.7 -2.9 6.8 -6.3 16 16 A N S S- 0 0 91 2,-0.1 3,-0.1 1,-0.1 -2,-0.1 -0.179 118.9-103.7 -91.4 39.8 -0.6 9.4 -7.8 17 17 A K S S+ 0 0 196 -3,-0.3 2,-0.3 -2,-0.2 -1,-0.1 0.773 93.4 115.0 43.1 28.4 0.3 7.0 -10.6 18 18 A Q - 0 0 89 -4,-0.4 -4,-2.6 2,-0.0 2,-0.3 -0.761 53.5-151.3-122.3 168.7 3.5 6.8 -8.5 19 19 A R E -A 13 0A 151 -6,-0.3 2,-0.4 -2,-0.3 -6,-0.2 -0.982 4.1-164.7-141.9 151.4 5.2 4.1 -6.5 20 20 A T E -A 12 0A 47 -8,-2.7 -8,-2.5 -2,-0.3 2,-0.4 -0.999 16.4-135.4-141.0 135.1 7.5 3.9 -3.5 21 21 A V E -A 11 0A 91 -2,-0.4 2,-0.3 -10,-0.2 -10,-0.2 -0.759 26.2-174.2 -91.9 131.8 9.7 1.1 -2.2 22 22 A V E -A 10 0A 39 -12,-3.0 -12,-2.8 -2,-0.4 2,-0.3 -0.813 27.3-102.0-122.3 162.9 9.6 0.5 1.5 23 23 A T E -A 9 0A 74 -2,-0.3 2,-0.8 -14,-0.2 -14,-0.2 -0.642 30.6-123.4 -86.9 141.4 11.6 -1.7 3.9 24 24 A V - 0 0 41 -16,-0.8 2,-0.3 -2,-0.3 44,-0.1 -0.764 36.9-179.5 -88.0 110.1 10.0 -5.0 5.1 25 25 A R - 0 0 143 -2,-0.8 2,-0.7 4,-0.1 42,-0.1 -0.797 30.1-137.4-110.8 153.1 10.0 -4.9 8.9 26 26 A D S S+ 0 0 145 -2,-0.3 3,-0.1 1,-0.1 -2,-0.0 -0.622 94.5 29.7-108.2 69.8 8.8 -7.5 11.4 27 27 A G S S+ 0 0 64 -2,-0.7 41,-0.1 1,-0.5 -1,-0.1 -0.048 91.6 88.4-179.9 -60.0 7.0 -5.3 13.9 28 28 A M - 0 0 51 1,-0.1 39,-1.8 38,-0.1 -1,-0.5 -0.024 69.2-123.2 -56.2 165.0 5.6 -2.1 12.4 29 29 A S B -E 66 0B 25 37,-0.3 4,-0.4 38,-0.1 37,-0.3 -0.323 24.9-100.3-101.9-173.8 2.1 -2.0 11.0 30 30 A V S > S+ 0 0 1 35,-1.7 4,-4.4 33,-0.8 5,-0.3 0.828 120.5 53.1 -76.9 -34.2 0.7 -1.1 7.6 31 31 A Y H > S+ 0 0 93 32,-1.5 4,-2.1 34,-0.4 -1,-0.1 0.971 109.4 44.7 -64.2 -57.0 -0.3 2.3 8.8 32 32 A D H 4 S+ 0 0 98 31,-0.2 4,-0.5 2,-0.2 -1,-0.2 0.682 121.2 46.6 -61.1 -16.8 3.1 3.3 10.2 33 33 A S H > S+ 0 0 9 -4,-0.4 4,-1.0 2,-0.1 3,-0.4 0.933 118.5 34.1 -88.0 -62.2 4.4 1.9 6.9 34 34 A L H X S+ 0 0 1 -4,-4.4 4,-1.6 1,-0.2 5,-0.2 0.596 99.7 93.5 -69.4 -10.3 2.0 3.4 4.4 35 35 A D H >X S+ 0 0 36 -4,-2.1 4,-2.7 -5,-0.3 3,-1.5 0.948 94.0 30.4 -44.2 -70.9 2.0 6.4 6.7 36 36 A K H 3> S+ 0 0 129 -4,-0.5 4,-4.1 -3,-0.4 5,-0.4 0.933 110.1 68.3 -55.4 -49.7 4.9 8.2 4.9 37 37 A A H 3< S+ 0 0 5 -4,-1.0 -1,-0.3 1,-0.2 -2,-0.2 0.777 113.2 34.2 -40.1 -30.1 3.8 6.6 1.6 38 38 A L H XX>S+ 0 0 0 -4,-1.6 3,-3.5 -3,-1.5 4,-3.4 0.914 115.6 51.4 -90.4 -59.4 0.9 8.9 2.1 39 39 A K H 3<5S+ 0 0 81 -4,-2.7 -2,-0.2 1,-0.3 -3,-0.2 0.890 96.9 70.8 -43.7 -48.3 2.4 11.9 3.8 40 40 A V T 3<5S+ 0 0 92 -4,-4.1 -1,-0.3 1,-0.3 -2,-0.1 0.788 119.5 20.5 -39.8 -31.9 5.0 11.9 1.0 41 41 A R T <45S- 0 0 76 -3,-3.5 -2,-0.3 -5,-0.4 -1,-0.3 0.675 117.3-107.5-108.7 -30.6 1.9 13.1 -1.0 42 42 A G T <5 + 0 0 48 -4,-3.4 -3,-0.3 -6,-0.3 -2,-0.1 0.411 68.3 145.8 113.2 5.0 -0.2 14.4 1.9 43 43 A L < - 0 0 31 -5,-1.7 2,-0.3 -7,-0.1 -1,-0.1 0.102 33.9-144.7 -60.6-177.7 -2.7 11.5 1.8 44 44 A N - 0 0 79 -6,-0.1 2,-0.5 -5,-0.0 3,-0.4 -0.980 24.1-115.7-152.0 157.3 -4.4 10.2 4.9 45 45 A Q S S+ 0 0 24 -2,-0.3 18,-0.1 1,-0.2 -10,-0.0 -0.189 105.7 67.9 -88.3 41.6 -5.6 6.9 6.4 46 46 A D S S+ 0 0 148 -2,-0.5 -1,-0.2 3,-0.0 -3,-0.0 0.628 110.6 22.8-123.7 -43.9 -9.1 8.2 6.3 47 47 A C S S+ 0 0 68 -3,-0.4 33,-1.7 2,-0.0 2,-0.3 -0.213 112.9 83.4-119.7 38.4 -10.0 8.5 2.7 48 48 A C E -C 79 0A 3 31,-0.3 2,-0.3 -5,-0.1 31,-0.3 -0.974 54.7-164.6-141.0 152.2 -7.5 6.0 1.4 49 49 A V E -C 78 0A 13 29,-2.8 29,-3.1 -2,-0.3 2,-0.5 -0.952 11.7-141.0-137.3 155.5 -7.4 2.3 1.1 50 50 A V E -CD 77 61A 0 11,-0.5 11,-2.0 -2,-0.3 2,-0.4 -0.980 14.5-159.8-122.6 126.5 -4.7 -0.3 0.5 51 51 A Y E -CD 76 60A 42 25,-2.6 25,-2.6 -2,-0.5 2,-0.3 -0.836 8.6-141.7-107.2 142.9 -5.2 -3.3 -1.7 52 52 A R E -CD 75 59A 71 7,-1.9 7,-2.9 -2,-0.4 2,-0.9 -0.722 17.9-119.7-102.1 152.2 -3.1 -6.5 -1.6 53 53 A L E + D 0 58A 73 21,-0.9 2,-0.5 -2,-0.3 5,-0.2 -0.805 43.0 161.5 -94.3 103.0 -2.0 -8.6 -4.5 54 54 A I S S- 0 0 66 3,-1.6 -2,-0.0 -2,-0.9 19,-0.0 -0.943 77.1 -29.5-127.7 108.7 -3.5 -12.1 -4.1 55 55 A K S S- 0 0 203 -2,-0.5 3,-0.1 1,-0.2 -1,-0.1 0.756 127.7 -50.5 57.2 24.2 -3.7 -14.3 -7.2 56 56 A G S S+ 0 0 61 1,-0.2 2,-0.4 0, 0.0 -1,-0.2 0.909 112.6 123.4 79.7 46.7 -4.0 -11.0 -9.0 57 57 A R - 0 0 193 -5,-0.1 -3,-1.6 2,-0.0 2,-1.2 -0.976 65.8-123.6-143.7 125.6 -6.8 -9.5 -7.0 58 58 A K E -D 53 0A 134 -2,-0.4 2,-0.8 -5,-0.2 -5,-0.2 -0.541 33.5-171.5 -69.8 97.1 -6.8 -6.2 -5.1 59 59 A T E -D 52 0A 62 -7,-2.9 -7,-1.9 -2,-1.2 -1,-0.1 -0.833 24.0-123.2 -97.9 105.0 -7.6 -7.5 -1.6 60 60 A V E -D 51 0A 93 -2,-0.8 2,-0.3 -9,-0.3 -9,-0.3 0.038 30.4-151.1 -40.3 151.9 -8.3 -4.5 0.7 61 61 A T E -D 50 0A 18 -11,-2.0 -11,-0.5 4,-0.0 2,-0.2 -0.888 9.0-115.2-130.9 161.0 -6.1 -4.4 3.8 62 62 A A - 0 0 41 -2,-0.3 -32,-0.1 1,-0.1 -13,-0.0 -0.529 9.1-142.3 -92.8 161.9 -6.4 -3.1 7.3 63 63 A W S S+ 0 0 50 -2,-0.2 -32,-1.5 -33,-0.1 -33,-0.8 0.848 103.9 51.6 -88.7 -41.9 -4.3 -0.3 8.8 64 64 A D S S+ 0 0 159 -34,-0.1 -1,-0.1 -35,-0.1 -2,-0.0 0.828 92.5 102.9 -63.0 -32.5 -4.0 -2.0 12.2 65 65 A T S S- 0 0 52 -36,-0.1 -35,-1.7 1,-0.1 -34,-0.4 0.102 79.3-106.3 -45.0 165.4 -2.8 -5.1 10.5 66 66 A A B -E 29 0B 39 -37,-0.3 -37,-0.3 -36,-0.1 -1,-0.1 -0.580 7.8-145.8 -97.6 162.1 0.9 -5.8 10.5 67 67 A I S > S+ 0 0 9 -39,-1.8 3,-0.5 -2,-0.2 -38,-0.1 0.386 84.9 87.1-104.5 -1.7 3.3 -5.5 7.6 68 68 A A T 3 S+ 0 0 43 -40,-0.4 2,-2.7 1,-0.3 3,-0.3 0.964 81.9 57.4 -60.6 -55.1 5.3 -8.5 8.8 69 69 A P T 3 S+ 0 0 88 0, 0.0 -1,-0.3 0, 0.0 -43,-0.1 -0.289 87.6 85.7 -75.0 55.3 3.1 -10.9 6.8 70 70 A L < + 0 0 10 -2,-2.7 2,-0.5 -3,-0.5 3,-0.3 -0.084 50.9 152.2-145.2 34.1 3.9 -9.0 3.6 71 71 A D S S+ 0 0 138 -3,-0.3 -61,-0.1 1,-0.2 -63,-0.1 -0.609 73.5 0.4 -74.7 118.1 7.2 -10.7 2.5 72 72 A G S S+ 0 0 61 -2,-0.5 2,-0.3 -63,-0.4 -1,-0.2 0.988 106.2 98.5 66.1 83.4 7.4 -10.4 -1.2 73 73 A E - 0 0 38 -3,-0.3 -62,-0.9 2,-0.0 2,-0.3 -0.925 59.3-116.7-170.3-170.1 4.3 -8.6 -2.4 74 74 A E E -b 11 0A 46 -2,-0.3 -21,-0.9 -64,-0.1 2,-0.3 -0.965 14.8-156.7-153.9 133.7 2.8 -5.3 -3.5 75 75 A L E -bC 12 52A 1 -64,-1.3 -62,-2.6 -2,-0.3 2,-0.6 -0.834 10.8-142.4-112.1 149.8 0.1 -3.1 -2.0 76 76 A I E -bC 13 51A 32 -25,-2.6 -25,-2.6 -2,-0.3 2,-0.7 -0.950 10.7-159.2-116.1 114.3 -2.0 -0.5 -3.9 77 77 A V E + C 0 50A 0 -64,-3.4 2,-0.2 -2,-0.6 -27,-0.2 -0.837 23.1 165.1 -96.1 116.9 -2.8 2.7 -2.0 78 78 A E E - C 0 49A 90 -29,-3.1 -29,-2.8 -2,-0.7 2,-0.5 -0.748 38.3-102.5-124.7 172.1 -5.8 4.5 -3.4 79 79 A V E - C 0 48A 53 -31,-0.3 2,-0.5 -2,-0.2 -31,-0.3 -0.854 37.8-112.6-101.0 129.4 -8.2 7.2 -2.3 80 80 A L + 0 0 86 -33,-1.7 2,-0.3 -2,-0.5 -1,-0.0 -0.447 66.0 126.1 -61.9 112.5 -11.6 6.3 -1.1 81 81 A S + 0 0 124 -2,-0.5 -2,-0.0 2,-0.0 -3,-0.0 -0.971 14.8 95.3-166.0 156.3 -14.0 7.6 -3.7 82 82 A G S S- 0 0 55 -2,-0.3 2,-1.3 3,-0.0 3,-0.1 -0.474 75.2 -64.4 133.4 156.3 -16.8 6.5 -6.0 83 83 A P - 0 0 114 0, 0.0 3,-0.4 0, 0.0 -2,-0.0 -0.594 42.2-166.0 -75.0 96.1 -20.6 6.4 -6.2 84 84 A S S S- 0 0 126 -2,-1.3 2,-0.3 1,-0.3 -3,-0.0 0.924 76.8 -13.7 -44.9 -57.4 -21.5 4.0 -3.3 85 85 A S 0 0 125 1,-0.2 -1,-0.3 -3,-0.1 -3,-0.0 -0.812 360.0 360.0-156.1 108.6 -25.0 3.7 -4.6 86 86 A G 0 0 107 -3,-0.4 -1,-0.2 -2,-0.3 0, 0.0 -0.129 360.0 360.0 114.8 360.0 -26.6 5.9 -7.2