==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGASE 09-FEB-05 1WY8 . COMPND 2 MOLECULE: NP95-LIKE RING FINGER PROTEIN, ISOFORM A; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.ZHAO,K.SAITO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 89 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6417.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 57.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 5.6 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 19.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 120 0, 0.0 2,-1.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-114.3 -16.5 9.9 12.7 2 2 A S - 0 0 127 2,-0.0 2,-0.2 25,-0.0 0, 0.0 -0.618 360.0-173.3 -76.9 102.0 -14.1 7.1 12.0 3 3 A S + 0 0 106 -2,-1.0 0, 0.0 1,-0.0 0, 0.0 -0.579 28.0 120.4 -95.2 158.9 -15.3 4.2 14.1 4 4 A G - 0 0 49 -2,-0.2 -2,-0.0 23,-0.1 -1,-0.0 0.239 36.9-159.4 145.5 83.4 -13.6 0.8 14.6 5 5 A S S S+ 0 0 142 2,-0.0 2,-0.3 0, 0.0 0, 0.0 0.918 86.8 46.1 -43.3 -57.4 -12.6 -0.5 18.0 6 6 A S S S- 0 0 88 1,-0.0 2,-0.1 19,-0.0 0, 0.0 -0.687 84.2-138.1 -92.7 143.3 -10.1 -2.9 16.4 7 7 A G - 0 0 37 -2,-0.3 2,-0.3 20,-0.1 20,-0.2 -0.462 13.0-119.4 -95.5 169.9 -7.7 -1.8 13.6 8 8 A M E -A 26 0A 12 18,-2.0 18,-1.5 -2,-0.1 2,-0.3 -0.829 23.5-166.8-111.0 149.3 -6.6 -3.5 10.4 9 9 A W E - 0 0 96 -2,-0.3 64,-2.2 15,-0.2 65,-0.3 -0.941 3.0-171.7-133.6 155.2 -3.2 -4.6 9.3 10 10 A I E -A 23 0A 9 13,-1.7 13,-1.0 -2,-0.3 2,-0.7 -0.946 25.4-117.6-142.8 162.6 -1.5 -5.7 6.1 11 11 A Q E -Ab 22 75A 63 63,-0.7 65,-1.9 -2,-0.3 2,-1.1 -0.899 20.2-162.8-108.1 111.2 1.8 -7.1 4.8 12 12 A V E +Ab 21 76A 1 9,-1.3 9,-1.2 -2,-0.7 2,-0.4 -0.745 17.5 177.6 -95.1 92.2 3.6 -4.9 2.4 13 13 A R E -Ab 20 77A 117 -2,-1.1 65,-2.5 63,-0.5 2,-0.3 -0.769 32.3-113.2 -97.9 139.5 6.1 -7.2 0.7 14 14 A T E > - b 0 78A 24 5,-1.4 3,-0.9 -2,-0.4 65,-0.2 -0.524 24.3-121.4 -72.3 129.5 8.4 -6.0 -2.1 15 15 A I T 3 S+ 0 0 88 63,-2.2 -1,-0.1 -2,-0.3 64,-0.1 0.825 116.9 51.4 -35.0 -44.0 7.7 -7.6 -5.5 16 16 A D T 3 S- 0 0 123 62,-0.4 -1,-0.3 3,-0.0 63,-0.1 0.929 111.5-126.4 -63.1 -47.0 11.3 -8.8 -5.4 17 17 A G < + 0 0 24 -3,-0.9 -2,-0.1 61,-0.2 3,-0.1 0.892 69.3 116.3 96.7 68.0 10.9 -10.3 -2.0 18 18 A S S S+ 0 0 100 1,-0.4 2,-0.4 -4,-0.1 -3,-0.0 0.589 75.1 23.5-129.2 -40.5 13.6 -9.0 0.4 19 19 A K - 0 0 123 -7,-0.0 -5,-1.4 -5,-0.0 -1,-0.4 -0.996 59.9-169.0-136.5 140.3 11.9 -7.1 3.1 20 20 A T E -A 13 0A 62 -2,-0.4 2,-0.2 -7,-0.2 -7,-0.2 -0.992 4.7-170.9-132.2 136.3 8.3 -7.2 4.5 21 21 A C E -A 12 0A 11 -9,-1.2 -9,-1.3 -2,-0.4 2,-0.4 -0.693 19.5-134.8-118.6 172.1 6.5 -4.8 6.8 22 22 A T E -A 11 0A 75 -2,-0.2 2,-0.2 -11,-0.2 -11,-0.2 -0.774 18.1-158.7-132.8 89.2 3.2 -4.8 8.7 23 23 A I E -A 10 0A 2 -13,-1.0 -13,-1.7 -2,-0.4 2,-0.2 -0.485 16.9-174.2 -69.4 129.9 1.3 -1.6 8.5 24 24 A E E + 0 0 114 -2,-0.2 -15,-0.2 -15,-0.2 -1,-0.0 -0.539 51.4 60.1-115.5-177.5 -1.3 -1.2 11.3 25 25 A D E S+ 0 0 149 1,-0.2 2,-0.4 -2,-0.2 -1,-0.2 0.942 70.8 155.6 62.6 49.5 -4.0 1.3 12.2 26 26 A V E -A 8 0A 7 -18,-1.5 -18,-2.0 -3,-0.1 2,-0.3 -0.865 29.4-151.7-111.2 143.7 -6.0 0.7 9.1 27 27 A S > - 0 0 36 -2,-0.4 3,-1.5 -20,-0.2 38,-0.3 -0.802 23.9-124.9-112.9 154.8 -9.7 1.2 8.5 28 28 A R T 3 S+ 0 0 106 -2,-0.3 38,-1.7 1,-0.3 42,-0.2 0.821 117.6 40.1 -64.3 -31.3 -12.1 -0.5 6.2 29 29 A K T 3 S+ 0 0 161 36,-0.2 2,-0.4 37,-0.1 -1,-0.3 0.045 88.1 132.0-105.1 23.8 -13.1 2.9 4.8 30 30 A A < - 0 0 20 -3,-1.5 35,-2.0 1,-0.1 36,-0.1 -0.649 58.2-121.5 -81.3 127.4 -9.5 4.2 4.8 31 31 A T B > -E 64 0B 50 -2,-0.4 4,-0.8 33,-0.2 3,-0.4 -0.244 13.3-124.9 -64.7 154.2 -8.4 5.8 1.5 32 32 A I H >> S+ 0 0 6 31,-2.5 4,-2.0 1,-0.2 3,-0.7 0.867 107.1 67.7 -68.0 -37.2 -5.4 4.4 -0.3 33 33 A E H 3> S+ 0 0 129 30,-0.3 4,-1.2 1,-0.3 -1,-0.2 0.848 100.6 50.0 -50.9 -37.0 -3.7 7.8 -0.3 34 34 A E H 3> S+ 0 0 101 -3,-0.4 4,-0.8 2,-0.2 -1,-0.3 0.824 106.5 56.3 -72.2 -32.2 -3.4 7.4 3.4 35 35 A L H XX S+ 0 0 16 -4,-0.8 3,-1.6 -3,-0.7 4,-1.2 0.972 100.6 55.0 -63.7 -56.3 -1.9 4.0 3.0 36 36 A R H 3X S+ 0 0 10 -4,-2.0 4,-2.6 1,-0.3 5,-0.3 0.889 96.6 67.4 -43.3 -49.3 1.0 5.0 0.8 37 37 A E H 3X S+ 0 0 92 -4,-1.2 4,-1.0 1,-0.2 -1,-0.3 0.866 101.3 49.1 -39.7 -47.7 2.1 7.5 3.4 38 38 A R H XX S+ 0 0 103 -3,-1.6 4,-2.2 -4,-0.8 3,-2.0 0.982 111.5 45.1 -58.5 -61.9 3.0 4.6 5.7 39 39 A V H 3X S+ 0 0 4 -4,-1.2 4,-1.7 1,-0.3 6,-0.6 0.758 112.7 55.4 -54.5 -24.6 5.0 2.7 3.1 40 40 A W H 3< S+ 0 0 109 -4,-2.6 -1,-0.3 -5,-0.3 -2,-0.2 0.705 110.0 44.4 -81.6 -21.3 6.6 6.0 2.3 41 41 A A H << S+ 0 0 77 -3,-2.0 -2,-0.2 -4,-1.0 -1,-0.2 0.725 121.4 37.9 -92.6 -26.7 7.6 6.5 5.9 42 42 A L H < S+ 0 0 77 -4,-2.2 -3,-0.2 -5,-0.1 -2,-0.2 0.918 129.0 29.5 -88.4 -54.6 8.9 3.0 6.4 43 43 A F S < S- 0 0 37 -4,-1.7 -3,-0.2 -5,-0.2 -2,-0.1 0.467 101.6-131.1 -84.5 -2.1 10.5 2.2 3.1 44 44 A D + 0 0 133 -6,-0.3 2,-0.4 1,-0.2 -4,-0.2 0.895 60.9 138.0 52.4 43.9 11.3 5.9 2.7 45 45 A V - 0 0 31 -6,-0.6 -1,-0.2 1,-0.0 -2,-0.1 -0.980 59.3-106.9-125.6 126.2 9.9 5.8 -0.8 46 46 A R > - 0 0 140 -2,-0.4 4,-2.0 1,-0.1 -1,-0.0 0.056 30.1-114.7 -42.8 154.6 7.6 8.5 -2.3 47 47 A P T 4 S+ 0 0 44 0, 0.0 -1,-0.1 0, 0.0 -11,-0.1 0.649 118.1 45.6 -69.7 -15.1 3.9 7.6 -2.7 48 48 A E T 4 S+ 0 0 144 3,-0.1 -2,-0.1 1,-0.1 -12,-0.0 0.725 110.1 51.8 -98.1 -28.8 4.4 7.8 -6.5 49 49 A C T 4 S+ 0 0 25 31,-0.1 32,-0.9 32,-0.0 2,-0.4 0.878 99.6 71.3 -75.1 -39.8 7.7 5.9 -6.7 50 50 A Q E < S-C 80 0A 0 -4,-2.0 2,-0.4 30,-0.2 30,-0.3 -0.671 72.7-156.4 -83.2 127.7 6.3 2.9 -4.7 51 51 A R E -C 79 0A 41 28,-2.1 28,-2.6 -2,-0.4 2,-0.5 -0.839 1.4-152.9-106.9 141.8 3.8 0.8 -6.6 52 52 A L E -C 78 0A 8 -2,-0.4 7,-1.3 7,-0.4 2,-0.4 -0.956 12.5-176.6-117.6 125.8 1.2 -1.5 -4.9 53 53 A F E -CD 77 58A 47 24,-2.6 24,-1.1 -2,-0.5 2,-0.4 -0.964 2.1-176.7-123.8 137.7 -0.2 -4.6 -6.6 54 54 A Y E > S- D 0 57A 58 3,-1.4 3,-1.7 -2,-0.4 22,-0.1 -0.995 70.1 -16.3-136.8 130.3 -2.9 -6.9 -5.3 55 55 A R T 3 S- 0 0 220 -2,-0.4 -1,-0.1 20,-0.4 3,-0.1 0.859 127.1 -55.5 46.2 40.6 -4.3 -10.1 -6.9 56 56 A G T 3 S+ 0 0 84 1,-0.2 2,-0.5 3,-0.0 -1,-0.3 0.824 114.5 122.6 64.1 31.4 -2.7 -9.0 -10.1 57 57 A K E < -D 54 0A 116 -3,-1.7 -3,-1.4 3,-0.0 2,-0.6 -0.909 69.3-124.6-130.6 105.1 -4.5 -5.7 -10.0 58 58 A Q E -D 53 0A 100 -2,-0.5 -5,-0.2 -5,-0.2 -3,-0.0 -0.230 36.0-127.4 -48.4 96.3 -2.6 -2.5 -10.0 59 59 A L - 0 0 4 -7,-1.3 -7,-0.4 -2,-0.6 2,-0.1 -0.241 26.7-148.1 -51.8 128.0 -4.0 -1.0 -6.8 60 60 A E - 0 0 109 1,-0.0 2,-0.2 -3,-0.0 -1,-0.1 -0.459 5.1-125.1 -96.1 170.7 -5.3 2.5 -7.6 61 61 A N S S+ 0 0 92 -2,-0.1 3,-0.1 1,-0.1 -1,-0.0 -0.728 79.6 47.9-114.0 164.4 -5.4 5.6 -5.3 62 62 A G S S+ 0 0 59 1,-0.4 -1,-0.1 -2,-0.2 2,-0.1 -0.030 92.8 90.9 98.6 -31.2 -8.2 7.9 -4.3 63 63 A Y S S- 0 0 25 -32,-0.1 -31,-2.5 -3,-0.1 -1,-0.4 -0.402 75.6-113.7 -92.8 172.1 -10.6 5.1 -3.4 64 64 A T B >> -E 31 0B 34 -33,-0.3 3,-2.2 -2,-0.1 4,-1.0 -0.836 28.0-108.5-109.8 146.5 -11.1 3.3 -0.0 65 65 A L H 3>>S+ 0 0 12 -35,-2.0 4,-2.3 -2,-0.3 5,-1.1 0.835 119.6 63.3 -34.4 -46.9 -10.3 -0.3 0.8 66 66 A F H 345S+ 0 0 134 -38,-1.7 -1,-0.3 1,-0.2 -37,-0.1 0.901 97.3 56.1 -47.5 -48.0 -14.0 -0.9 0.9 67 67 A D H <45S+ 0 0 102 -3,-2.2 -1,-0.2 1,-0.3 -2,-0.2 0.927 117.8 32.7 -51.4 -51.0 -14.2 0.0 -2.8 68 68 A Y H <5S- 0 0 57 -4,-1.0 -1,-0.3 -3,-0.3 -2,-0.2 0.616 108.2-130.5 -82.0 -13.5 -11.7 -2.7 -3.7 69 69 A D T <5 - 0 0 118 -4,-2.3 -3,-0.2 -5,-0.4 2,-0.1 0.962 33.2-167.7 62.3 54.1 -13.0 -4.8 -0.8 70 70 A V < - 0 0 23 -5,-1.1 -1,-0.1 -42,-0.2 2,-0.1 -0.465 9.3-134.1 -74.9 144.5 -9.6 -5.6 0.7 71 71 A G > - 0 0 33 -2,-0.1 3,-0.8 1,-0.1 2,-0.4 -0.421 28.5 -85.0 -94.3 172.2 -9.3 -8.3 3.3 72 72 A L T 3 S+ 0 0 104 1,-0.3 -62,-0.2 -2,-0.1 -1,-0.1 -0.620 111.0 8.0 -80.0 130.4 -7.5 -8.3 6.6 73 73 A N T 3 S+ 0 0 71 -64,-2.2 2,-0.5 -2,-0.4 -1,-0.3 0.892 87.3 170.2 68.6 40.7 -3.8 -9.3 6.4 74 74 A D < - 0 0 11 -3,-0.8 -63,-0.7 -65,-0.3 2,-0.3 -0.744 31.8-128.8 -89.3 126.3 -3.8 -9.2 2.6 75 75 A I E -b 11 0A 88 -2,-0.5 2,-0.5 -65,-0.1 -20,-0.4 -0.578 25.5-171.8 -76.2 129.3 -0.3 -9.4 1.0 76 76 A I E -b 12 0A 8 -65,-1.9 -63,-0.5 -2,-0.3 -22,-0.2 -0.960 22.2-127.0-128.2 115.4 0.3 -6.7 -1.6 77 77 A Q E -bC 13 53A 60 -24,-1.1 -24,-2.6 -2,-0.5 2,-0.6 -0.321 22.3-147.7 -59.3 134.0 3.4 -6.7 -3.8 78 78 A L E -bC 14 52A 2 -65,-2.5 -63,-2.2 -26,-0.2 2,-0.6 -0.928 15.0-175.7-111.7 118.4 5.4 -3.5 -3.6 79 79 A L E - C 0 51A 53 -28,-2.6 -28,-2.1 -2,-0.6 2,-0.2 -0.916 7.3-168.4-117.1 107.2 7.3 -2.3 -6.7 80 80 A V E - C 0 50A 66 -2,-0.6 -30,-0.2 -30,-0.3 -31,-0.1 -0.582 14.8-130.0 -92.2 155.5 9.4 0.8 -6.3 81 81 A R - 0 0 124 -32,-0.9 -32,-0.0 -2,-0.2 -33,-0.0 -0.819 19.6-119.7-107.8 145.7 11.0 2.8 -9.1 82 82 A P - 0 0 94 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.003 50.7 -71.8 -69.8-179.5 14.6 3.9 -9.4 83 83 A D - 0 0 141 1,-0.1 -2,-0.1 3,-0.0 4,-0.0 0.893 54.8-166.7 -39.5 -55.4 15.9 7.5 -9.6 84 84 A S - 0 0 97 2,-0.1 3,-0.2 0, 0.0 -1,-0.1 0.873 62.2 -38.8 65.2 37.8 14.5 7.7 -13.2 85 85 A G S S- 0 0 30 1,-0.1 0, 0.0 3,-0.0 0, 0.0 0.078 73.6 -81.8 93.3 153.4 16.5 10.9 -13.8 86 86 A P S S+ 0 0 130 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.452 71.9 153.3 -69.7 1.1 17.3 13.9 -11.6 87 87 A S + 0 0 99 -3,-0.2 2,-0.3 2,-0.1 -2,-0.0 -0.045 14.3 152.5 -36.9 115.2 13.8 15.3 -12.5 88 88 A S 0 0 114 1,-0.1 -1,-0.0 0, 0.0 -3,-0.0 -0.937 360.0 360.0-156.6 129.3 12.9 17.5 -9.6 89 89 A G 0 0 129 -2,-0.3 -1,-0.1 0, 0.0 -2,-0.1 0.748 360.0 360.0 -47.3 360.0 10.6 20.5 -9.2