==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 15-FEB-05 1WYL . COMPND 2 MOLECULE: NEDD9 INTERACTING PROTEIN WITH CALPONIN HOMOLOGY . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.TOMIZAWA,T.KIGAWA,S.KOSHIBA,M.INOUE,S.YOKOYAMA,RIKEN . 116 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6555.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 79 68.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 6.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 16 13.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 50 43.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 122 0, 0.0 2,-0.7 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 43.2 11.6 -18.0 1.0 2 2 A S + 0 0 91 2,-0.0 2,-0.3 13,-0.0 109,-0.1 -0.865 360.0 106.6-114.0 98.3 8.9 -16.1 -0.7 3 3 A S + 0 0 79 -2,-0.7 2,-0.1 109,-0.1 109,-0.1 -0.964 17.7 122.1-166.9 150.5 7.1 -18.1 -3.3 4 4 A G S S- 0 0 56 -2,-0.3 -2,-0.0 109,-0.1 7,-0.0 -0.338 82.5 -21.3-167.9-105.2 3.8 -20.0 -3.9 5 5 A S - 0 0 72 -2,-0.1 111,-0.5 3,-0.1 5,-0.0 0.560 61.3-158.3-104.8 -14.8 1.2 -19.6 -6.6 6 6 A S S S+ 0 0 25 1,-0.2 110,-0.2 109,-0.1 3,-0.1 0.848 73.7 79.2 34.7 49.8 2.1 -16.1 -7.6 7 7 A G S S+ 0 0 64 1,-0.2 -1,-0.2 108,-0.1 2,-0.0 0.466 73.8 62.0-143.6 -52.8 -1.4 -15.7 -9.1 8 8 A T S >> S- 0 0 76 1,-0.1 3,-1.9 3,-0.0 4,-0.6 -0.248 97.6 -92.6 -79.6 171.3 -4.0 -15.0 -6.5 9 9 A Q H >> S+ 0 0 109 1,-0.3 4,-3.2 2,-0.2 3,-0.5 0.724 116.8 81.9 -56.0 -20.7 -4.2 -12.0 -4.2 10 10 A E H 3> S+ 0 0 92 1,-0.3 4,-1.9 2,-0.2 5,-0.4 0.872 85.8 55.8 -52.8 -39.8 -2.3 -14.1 -1.7 11 11 A E H <> S+ 0 0 40 -3,-1.9 4,-1.2 2,-0.2 -1,-0.3 0.887 114.7 38.4 -61.2 -40.3 0.9 -13.2 -3.6 12 12 A L H X S+ 0 0 46 -4,-1.2 3,-0.9 -5,-0.2 4,-0.6 0.990 117.2 38.1 -70.0 -63.8 6.3 -4.5 4.0 20 20 A T H >< S+ 0 0 1 -4,-3.0 3,-1.2 1,-0.2 6,-0.3 0.850 99.7 81.9 -56.6 -35.9 3.8 -2.9 6.3 21 21 A A H 3< S+ 0 0 58 -4,-3.0 -1,-0.2 -5,-0.4 -2,-0.2 0.868 85.5 56.9 -34.7 -57.2 4.9 -5.3 9.1 22 22 A G H << S+ 0 0 57 -3,-0.9 -1,-0.3 -4,-0.8 -2,-0.2 0.890 90.4 84.3 -44.1 -49.8 7.8 -2.9 9.8 23 23 A Y S X< S- 0 0 27 -3,-1.2 3,-0.9 -4,-0.6 2,-0.3 -0.391 89.5-121.0 -61.8 123.2 5.4 -0.1 10.4 24 24 A P T 3 S+ 0 0 107 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 -0.502 94.0 13.8 -69.8 124.6 4.1 -0.2 14.0 25 25 A G T 3 S+ 0 0 82 -2,-0.3 2,-0.7 1,-0.2 15,-0.1 0.026 97.4 112.7 100.7 -27.3 0.4 -0.5 14.2 26 26 A V < + 0 0 12 -3,-0.9 2,-0.4 -6,-0.3 -1,-0.2 -0.721 36.2 167.0 -85.2 113.5 -0.0 -1.4 10.6 27 27 A H - 0 0 150 -2,-0.7 2,-0.9 7,-0.2 3,-0.2 -0.858 20.7-158.7-131.6 98.2 -1.2 -5.0 10.2 28 28 A V + 0 0 1 -2,-0.4 3,-0.1 1,-0.2 -7,-0.1 -0.654 33.0 146.7 -79.4 104.6 -2.5 -6.1 6.8 29 29 A S S S+ 0 0 59 -2,-0.9 2,-0.3 1,-0.4 -1,-0.2 0.594 70.8 10.9-110.5 -20.2 -4.7 -9.1 7.4 30 30 A D > - 0 0 94 -3,-0.2 2,-2.2 -17,-0.1 4,-1.1 -0.932 65.6-126.3-162.3 135.4 -7.2 -8.5 4.6 31 31 A L T 4 S+ 0 0 30 -2,-0.3 68,-0.2 1,-0.2 -3,-0.0 -0.292 96.5 72.7 -79.0 54.8 -7.5 -6.2 1.6 32 32 A S T 4 S- 0 0 84 -2,-2.2 -1,-0.2 66,-0.1 66,-0.1 0.589 119.4 -12.3-129.1 -59.3 -10.9 -5.0 2.7 33 33 A S T >> S+ 0 0 80 -3,-0.4 4,-1.2 2,-0.1 3,-0.7 0.534 115.2 82.8-123.3 -20.5 -10.7 -2.7 5.8 34 34 A S T 3< S+ 0 0 16 -4,-1.1 6,-0.4 1,-0.3 4,-0.3 0.770 103.8 38.3 -57.6 -25.7 -7.1 -3.3 6.8 35 35 A W T 34 S+ 0 0 0 -5,-0.3 6,-0.3 2,-0.1 -1,-0.3 0.531 98.8 79.6-100.9 -11.0 -6.2 -0.7 4.2 36 36 A A T <4 S+ 0 0 15 -3,-0.7 -2,-0.2 1,-0.2 31,-0.1 0.902 80.4 68.0 -62.6 -42.6 -9.2 1.5 4.9 37 37 A D S < S- 0 0 104 -4,-1.2 30,-0.2 1,-0.1 -1,-0.2 0.913 101.1-131.5 -42.1 -57.6 -7.5 3.1 7.9 38 38 A G S > S+ 0 0 0 -4,-0.3 4,-1.4 28,-0.1 3,-0.2 -0.209 87.2 85.6 131.4 -44.7 -4.9 4.8 5.8 39 39 A L H > S+ 0 0 55 1,-0.2 4,-2.9 2,-0.2 3,-0.5 0.920 79.3 70.1 -53.7 -47.8 -1.6 4.0 7.4 40 40 A A H > S+ 0 0 1 -6,-0.4 4,-2.7 1,-0.3 3,-0.3 0.879 102.2 41.8 -33.7 -68.1 -1.4 0.7 5.5 41 41 A L H > S+ 0 0 0 -6,-0.3 4,-2.0 1,-0.2 -1,-0.3 0.861 114.0 55.4 -51.5 -38.6 -0.8 2.5 2.2 42 42 A C H X S+ 0 0 0 -4,-1.4 4,-2.9 -3,-0.5 -1,-0.2 0.927 110.1 44.0 -61.5 -47.1 1.6 4.8 4.0 43 43 A A H X S+ 0 0 0 -4,-2.9 4,-3.3 -3,-0.3 5,-0.4 0.944 110.5 53.9 -63.7 -49.9 3.7 2.0 5.4 44 44 A L H X S+ 0 0 0 -4,-2.7 4,-2.1 -5,-0.3 -1,-0.2 0.883 116.4 40.2 -52.2 -41.9 3.8 0.1 2.1 45 45 A V H X S+ 0 0 0 -4,-2.0 4,-1.7 -5,-0.3 -2,-0.2 0.980 115.6 47.4 -72.0 -59.7 5.1 3.2 0.4 46 46 A Y H < S+ 0 0 18 -4,-2.9 6,-0.2 -5,-0.2 -2,-0.2 0.899 118.1 44.6 -48.3 -47.1 7.5 4.5 3.1 47 47 A R H < S+ 0 0 122 -4,-3.3 -1,-0.2 -5,-0.2 -2,-0.2 0.986 102.9 61.4 -62.6 -61.5 8.9 0.9 3.4 48 48 A L H < S+ 0 0 28 -4,-2.1 -1,-0.2 -5,-0.4 -2,-0.2 0.804 120.9 28.7 -34.1 -39.9 9.2 0.2 -0.3 49 49 A Q >< - 0 0 50 -4,-1.7 3,-1.0 -3,-0.2 -1,-0.3 -0.845 64.2-178.9-132.2 96.8 11.6 3.2 -0.4 50 50 A P T 3 S+ 0 0 105 0, 0.0 -1,-0.1 0, 0.0 -3,-0.1 0.531 81.6 68.9 -69.8 -5.2 13.5 3.8 2.9 51 51 A G T 3 S+ 0 0 75 -4,-0.1 3,-0.1 -5,-0.1 -4,-0.1 0.789 80.5 89.0 -83.8 -29.7 15.1 6.8 1.1 52 52 A L S < S- 0 0 33 -3,-1.0 -3,-0.0 -6,-0.2 21,-0.0 -0.277 95.4 -78.7 -67.3 154.7 11.9 8.9 1.0 53 53 A L - 0 0 81 1,-0.1 -1,-0.1 2,-0.0 -2,-0.0 0.132 52.5-109.2 -44.7 168.5 11.0 11.2 3.9 54 54 A E - 0 0 160 -3,-0.1 2,-2.0 1,-0.0 3,-0.3 -0.749 30.1 -96.1-107.9 155.3 9.5 9.7 7.0 55 55 A P + 0 0 21 0, 0.0 4,-0.4 0, 0.0 11,-0.0 -0.453 56.9 154.1 -69.8 81.2 5.9 9.9 8.4 56 56 A S S S+ 0 0 104 -2,-2.0 4,-0.2 2,-0.1 -3,-0.0 0.851 81.8 20.5 -77.9 -36.3 6.4 12.8 10.8 57 57 A E S > S+ 0 0 149 -3,-0.3 3,-2.4 2,-0.1 9,-0.1 0.834 109.9 72.1 -98.3 -45.8 2.8 13.9 10.7 58 58 A L G > S+ 0 0 11 1,-0.3 3,-1.4 2,-0.2 -2,-0.1 0.747 83.3 79.8 -42.4 -25.4 1.1 10.8 9.4 59 59 A Q G 3 S+ 0 0 156 -4,-0.4 -1,-0.3 1,-0.3 -2,-0.1 0.914 110.4 17.9 -50.7 -48.6 1.8 9.5 12.9 60 60 A G G < S+ 0 0 75 -3,-2.4 -1,-0.3 -4,-0.2 2,-0.2 -0.323 101.7 121.1-122.3 50.8 -1.1 11.5 14.3 61 61 A L < - 0 0 61 -3,-1.4 2,-0.1 1,-0.1 -3,-0.0 -0.600 67.3 -84.6-107.8 170.4 -3.2 12.2 11.2 62 62 A G > - 0 0 38 -2,-0.2 4,-2.2 1,-0.1 5,-0.2 -0.442 43.3-104.4 -75.6 147.9 -6.8 11.3 10.2 63 63 A A H > S+ 0 0 55 1,-0.2 4,-1.1 2,-0.2 -1,-0.1 0.809 127.3 37.0 -36.3 -39.2 -7.6 8.0 8.6 64 64 A L H > S+ 0 0 80 2,-0.2 4,-2.4 1,-0.1 -1,-0.2 0.931 104.7 66.0 -81.6 -51.3 -7.9 10.0 5.4 65 65 A E H > S+ 0 0 112 1,-0.2 4,-1.1 2,-0.2 -2,-0.2 0.841 106.0 48.0 -37.5 -44.4 -5.1 12.5 6.0 66 66 A A H >X S+ 0 0 4 -4,-2.2 3,-1.4 -29,-0.2 4,-1.3 0.999 105.9 51.7 -62.4 -70.5 -2.7 9.5 5.8 67 67 A T H 3X S+ 0 0 0 -4,-1.1 4,-2.5 1,-0.3 5,-0.3 0.814 102.9 66.0 -35.4 -40.9 -4.0 7.8 2.6 68 68 A A H 3X S+ 0 0 48 -4,-2.4 4,-1.3 1,-0.2 -1,-0.3 0.940 103.5 42.5 -49.0 -57.0 -3.6 11.2 1.0 69 69 A W H XX>S+ 0 0 33 -3,-1.4 4,-2.0 -4,-1.1 3,-1.5 0.969 110.6 55.4 -55.4 -59.7 0.2 11.2 1.4 70 70 A A H 3X5S+ 0 0 0 -4,-1.3 4,-2.3 1,-0.3 5,-0.3 0.898 108.0 48.4 -38.5 -59.7 0.6 7.6 0.3 71 71 A L H 3X5S+ 0 0 17 -4,-2.5 4,-1.2 2,-0.2 -1,-0.3 0.805 116.0 48.5 -54.2 -29.9 -1.2 8.2 -3.0 72 72 A K H XX5S+ 0 0 125 -3,-1.5 4,-2.1 -4,-1.3 3,-1.0 0.990 113.3 39.5 -73.9 -70.3 1.0 11.2 -3.4 73 73 A V H 3X>S+ 0 0 11 -4,-2.0 4,-1.5 1,-0.3 5,-1.3 0.747 119.1 53.5 -52.1 -23.6 4.5 9.8 -2.7 74 74 A A H 3> - 0 0 69 -2,-0.4 4,-1.9 1,-0.2 3,-1.1 -0.589 26.8-124.2 -75.6 123.9 -9.8 8.0 -4.7 86 86 A A H 3> S+ 0 0 25 -2,-0.4 4,-2.0 1,-0.3 5,-0.3 0.778 115.5 54.0 -33.9 -35.2 -8.2 8.3 -1.3 87 87 A Q H 3>>S+ 0 0 107 2,-0.2 4,-2.8 1,-0.2 5,-0.5 0.945 104.4 50.8 -68.8 -49.9 -11.8 8.6 -0.1 88 88 A A H <>>S+ 0 0 2 -3,-1.1 4,-1.8 3,-0.2 5,-1.4 0.894 111.2 50.5 -54.8 -43.2 -13.0 5.4 -1.8 89 89 A V H <5S+ 0 0 5 -4,-1.9 -2,-0.2 2,-0.2 -1,-0.2 0.978 123.0 28.0 -59.9 -59.6 -10.1 3.5 -0.2 90 90 A V H <5S+ 0 0 27 -4,-2.0 -2,-0.2 -5,-0.2 -3,-0.2 0.986 119.5 54.1 -66.7 -61.1 -10.7 4.7 3.4 91 91 A A H <5S- 0 0 59 -4,-2.8 -3,-0.2 -5,-0.3 -1,-0.2 0.856 104.7-132.5 -40.9 -44.2 -14.4 5.3 3.1 92 92 A G T << + 0 0 53 -4,-1.8 -3,-0.2 -5,-0.5 -4,-0.1 0.918 66.5 122.7 87.5 50.9 -14.7 1.7 1.9 93 93 A S S + 0 0 85 -6,-0.6 4,-1.2 1,-0.1 -1,-0.2 -0.788 57.3 168.0-115.5 87.8 -14.9 0.6 -3.9 95 95 A P H > S+ 0 0 70 0, 0.0 4,-1.1 0, 0.0 -1,-0.1 0.706 78.1 57.5 -69.7 -20.6 -13.1 -2.6 -2.6 96 96 A L H > S+ 0 0 133 2,-0.2 4,-2.0 1,-0.1 5,-0.3 0.952 98.8 55.3 -75.4 -53.2 -12.2 -3.5 -6.2 97 97 A G H > S+ 0 0 19 1,-0.2 4,-2.9 2,-0.2 5,-0.2 0.905 104.7 54.8 -45.5 -52.0 -10.3 -0.3 -7.0 98 98 A L H X S+ 0 0 4 -4,-1.2 4,-2.8 1,-0.2 5,-0.3 0.933 105.5 52.3 -48.6 -54.9 -8.0 -0.8 -4.0 99 99 A I H X S+ 0 0 55 -4,-1.1 4,-2.5 1,-0.2 -1,-0.2 0.920 113.2 43.9 -48.2 -51.7 -7.0 -4.3 -5.1 100 100 A A H X S+ 0 0 45 -4,-2.0 4,-1.0 1,-0.2 -1,-0.2 0.870 111.1 56.2 -63.0 -37.8 -6.1 -3.0 -8.6 101 101 A Y H >X S+ 0 0 0 -4,-2.9 4,-0.8 -5,-0.3 3,-0.7 0.945 111.6 41.1 -59.9 -50.7 -4.3 -0.0 -7.1 102 102 A L H >X S+ 0 0 0 -4,-2.8 4,-1.5 1,-0.2 3,-1.0 0.913 101.6 70.4 -64.5 -43.9 -2.0 -2.2 -4.9 103 103 A S H 3X S+ 0 0 50 -4,-2.5 4,-2.9 -5,-0.3 -1,-0.2 0.825 95.4 57.2 -41.9 -37.4 -1.5 -4.7 -7.7 104 104 A H H