==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION/DNA 22-MAR-05 1X0F . COMPND 2 MOLECULE: HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN D0; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR Y.ENOKIZONO,Y.KONISHI,K.NAGATA,K.OUHASHI,S.UESUGI, . 79 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5133.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 64.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 21.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 12.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 8.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 17.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 181 A V 0 0 159 0, 0.0 2,-0.3 0, 0.0 50,-0.1 0.000 360.0 360.0 360.0 156.5 -8.8 10.7 0.1 2 182 A K + 0 0 72 48,-0.1 48,-2.0 2,-0.0 2,-0.3 -0.870 360.0 153.4-150.0 112.6 -8.0 7.0 -0.4 3 183 A K E -A 49 0A 26 74,-0.3 2,-0.4 -2,-0.3 46,-0.3 -0.947 26.1-150.6-135.5 155.9 -4.8 5.3 0.5 4 184 A I E -A 48 0A 0 44,-3.0 44,-2.6 72,-0.4 2,-0.9 -0.986 10.9-146.7-131.2 121.2 -3.7 1.9 1.4 5 185 A F E -AB 47 75A 50 70,-2.4 70,-3.1 -2,-0.4 2,-0.4 -0.790 13.1-156.5 -93.8 109.2 -0.9 1.2 3.8 6 186 A V E -AB 46 74A 0 40,-2.4 40,-1.2 -2,-0.9 2,-0.5 -0.701 9.9-157.3 -86.1 126.4 0.9 -2.1 2.8 7 187 A G E + B 0 73A 15 66,-1.5 66,-3.7 -2,-0.4 58,-0.2 -0.933 58.6 13.9-114.8 126.4 2.8 -3.7 5.6 8 188 A G S S+ 0 0 47 35,-0.5 63,-0.3 -2,-0.5 2,-0.3 0.947 70.6 177.0 80.6 83.1 5.7 -6.1 5.3 9 189 A L - 0 0 24 35,-2.9 -1,-0.1 1,-0.2 63,-0.1 -0.815 34.1 -85.9-117.2 157.8 7.2 -6.1 1.8 10 190 A S - 0 0 49 -2,-0.3 3,-0.4 1,-0.2 -1,-0.2 0.284 62.4 -76.8 -45.4-177.4 10.1 -8.0 0.2 11 191 A P S S- 0 0 111 0, 0.0 -1,-0.2 0, 0.0 34,-0.0 0.367 121.1 -5.6 -70.6 6.5 13.7 -6.5 0.4 12 192 A D S S- 0 0 107 32,-0.1 -2,-0.1 2,-0.0 23,-0.1 0.056 73.7-157.4 160.6 77.7 12.7 -4.1 -2.4 13 193 A T - 0 0 4 -3,-0.4 2,-0.6 1,-0.1 20,-0.1 -0.521 22.4-125.1 -73.0 131.8 9.3 -4.3 -4.1 14 194 A P >> - 0 0 38 0, 0.0 3,-1.9 0, 0.0 4,-1.4 -0.680 6.5-143.0 -81.0 114.3 9.1 -2.7 -7.6 15 195 A E H 3> S+ 0 0 84 -2,-0.6 4,-1.4 1,-0.3 5,-0.1 0.682 94.3 79.4 -48.1 -17.8 6.3 -0.2 -7.7 16 196 A E H 3> S+ 0 0 145 2,-0.2 4,-0.8 1,-0.2 -1,-0.3 0.902 99.7 33.3 -61.4 -44.0 5.8 -1.5 -11.3 17 197 A K H X> S+ 0 0 61 -3,-1.9 4,-3.1 2,-0.2 3,-1.7 0.944 114.0 58.7 -76.4 -46.4 3.9 -4.7 -10.2 18 198 A I H 3X S+ 0 0 0 -4,-1.4 4,-1.5 1,-0.3 5,-0.3 0.806 104.9 53.7 -48.3 -29.0 2.4 -2.8 -7.4 19 199 A R H 3< S+ 0 0 141 -4,-1.4 4,-0.4 -5,-0.3 -1,-0.3 0.801 114.9 39.1 -76.1 -31.7 1.1 -0.6 -10.3 20 200 A E H 4 S+ 0 0 21 -4,-0.4 3,-1.4 -6,-0.4 -3,-0.2 0.993 107.6 48.4 -62.8 -55.0 -3.6 -0.9 -11.2 24 204 A G H 3< S+ 0 0 72 -4,-4.8 -1,-0.2 1,-0.3 -2,-0.2 0.819 104.2 64.4 -51.4 -27.8 -5.6 -3.9 -12.1 25 205 A F H 3< S- 0 0 33 -4,-0.6 -1,-0.3 -5,-0.4 2,-0.3 0.922 126.9 -86.5 -59.2 -44.9 -7.4 -3.1 -8.9 26 206 A G S << S- 0 0 32 -4,-1.6 2,-1.0 -3,-1.4 -1,-0.2 -0.846 83.7 -6.1 172.4-132.4 -8.5 0.1 -10.5 27 207 A E - 0 0 98 -2,-0.3 25,-1.5 -3,-0.1 24,-1.2 -0.763 62.9-159.0 -97.2 97.1 -7.1 3.5 -10.8 28 208 A V E -C 50 0A 16 -2,-1.0 22,-0.3 22,-0.3 3,-0.1 -0.512 8.2-166.8 -72.6 137.6 -3.9 3.7 -8.8 29 209 A E E - 0 0 105 20,-3.0 2,-0.3 1,-0.4 21,-0.2 0.900 63.2 -29.3 -89.5 -50.7 -2.9 7.2 -7.9 30 210 A S E -C 49 0A 24 19,-2.1 19,-2.7 2,-0.0 2,-0.4 -0.986 46.1-141.5-165.1 159.0 0.7 6.5 -6.7 31 211 A I E -C 48 0A 10 -2,-0.3 2,-0.5 17,-0.2 17,-0.2 -0.986 15.6-177.1-131.6 120.7 3.0 3.9 -5.1 32 212 A E E -C 47 0A 92 15,-2.4 15,-2.3 -2,-0.4 -2,-0.0 -0.875 4.3-174.6-123.4 102.6 5.6 4.8 -2.6 33 213 A L - 0 0 16 -2,-0.5 2,-0.3 13,-0.2 13,-0.2 -0.815 21.2-144.9 -96.8 104.9 7.9 2.0 -1.3 34 214 A P + 0 0 45 0, 0.0 11,-0.5 0, 0.0 2,-0.4 -0.512 21.3 179.0 -72.9 130.3 10.1 3.6 1.4 35 215 A M - 0 0 132 -2,-0.3 2,-0.6 9,-0.1 -2,-0.0 -0.997 16.7-157.2-135.8 131.0 13.7 2.3 1.7 36 216 A D > + 0 0 61 -2,-0.4 4,-0.5 5,-0.2 8,-0.1 -0.907 12.1 177.0-112.0 108.0 16.5 3.4 4.1 37 217 A N T 4 S+ 0 0 148 -2,-0.6 -1,-0.1 1,-0.2 0, 0.0 0.593 80.6 58.6 -82.0 -12.4 20.0 2.6 2.9 38 218 A K T 4 S- 0 0 197 1,-0.0 -1,-0.2 0, 0.0 -2,-0.0 0.911 135.9 -8.2 -82.6 -47.3 21.5 4.3 5.9 39 219 A T T 4 S- 0 0 89 2,-0.0 -2,-0.2 0, 0.0 -3,-0.0 0.535 79.7-142.2-124.2 -19.7 19.9 2.2 8.6 40 220 A N < - 0 0 100 -4,-0.5 -3,-0.1 2,-0.0 4,-0.0 0.957 27.6-156.1 51.7 58.5 17.4 0.0 6.7 41 221 A K > - 0 0 125 1,-0.1 3,-0.7 2,-0.1 -5,-0.2 0.171 29.7 -97.5 -51.9-179.2 14.8 0.2 9.4 42 222 A R T 3 S+ 0 0 201 1,-0.2 -1,-0.1 2,-0.0 -34,-0.1 0.065 95.9 107.5 -94.0 26.1 12.1 -2.5 9.6 43 223 A R T 3 + 0 0 89 -35,-0.1 -35,-0.5 2,-0.1 -1,-0.2 0.815 38.6 152.0 -71.3 -26.0 9.6 -0.3 7.8 44 224 A G < + 0 0 21 -3,-0.7 -35,-2.9 -36,-0.1 -36,-0.3 0.410 39.2 101.6 -8.3 73.8 10.2 -2.7 4.8 45 225 A F - 0 0 31 -11,-0.5 2,-0.3 -37,-0.3 -38,-0.2 -0.914 61.8-126.1-157.1 176.9 6.7 -1.9 3.5 46 226 A C E -A 6 0A 0 -40,-1.2 -40,-2.4 -2,-0.3 2,-0.3 -0.994 6.5-142.5-141.4 149.2 4.9 0.1 0.9 47 227 A F E -AC 5 32A 38 -15,-2.3 -15,-2.4 -2,-0.3 2,-0.4 -0.825 15.2-167.7-107.2 146.4 2.1 2.7 0.6 48 228 A I E -AC 4 31A 0 -44,-2.6 -44,-3.0 -2,-0.3 2,-0.4 -0.955 4.5-164.7-141.1 121.2 -0.4 2.9 -2.2 49 229 A T E -AC 3 30A 24 -19,-2.7 -20,-3.0 -2,-0.4 -19,-2.1 -0.833 10.1-151.6-102.4 137.9 -2.8 5.7 -3.0 50 230 A F E - C 0 28A 2 -48,-2.0 -22,-0.3 -2,-0.4 -48,-0.1 -0.942 15.1-147.7-113.6 126.4 -5.7 5.1 -5.4 51 231 A K S S+ 0 0 89 -24,-1.2 -23,-0.2 -2,-0.5 -1,-0.2 0.905 97.0 44.8 -51.8 -37.3 -7.2 8.0 -7.4 52 232 A E S S- 0 0 79 -25,-1.5 -2,-0.2 -3,-0.1 -23,-0.1 -0.232 86.0-130.9 -93.4-175.3 -10.3 6.0 -6.9 53 233 A E S > S+ 0 0 95 -2,-0.1 4,-1.6 3,-0.1 -50,-0.1 0.240 85.6 82.9-124.7 11.4 -11.6 4.4 -3.7 54 234 A E H > S+ 0 0 54 2,-0.2 4,-2.9 3,-0.2 5,-0.4 0.970 91.4 44.9 -80.7 -59.8 -12.4 0.9 -4.9 55 235 A P H > S+ 0 0 0 0, 0.0 4,-3.0 0, 0.0 5,-0.2 0.867 119.3 49.6 -49.7 -31.9 -9.0 -0.8 -4.7 56 236 A V H > S+ 0 0 6 2,-0.2 4,-1.9 1,-0.2 -2,-0.2 0.901 107.1 51.2 -72.1 -44.9 -8.9 1.0 -1.4 57 237 A K H < S+ 0 0 105 -4,-1.6 4,-0.4 1,-0.2 -1,-0.2 0.882 121.8 33.6 -62.3 -37.9 -12.3 -0.3 -0.4 58 238 A K H >X S+ 0 0 77 -4,-2.9 3,-1.3 2,-0.2 4,-1.2 0.924 111.7 60.7 -82.1 -50.0 -11.3 -3.9 -1.2 59 239 A I H >< S+ 0 0 0 -4,-3.0 3,-1.3 -5,-0.4 15,-0.2 0.889 102.7 52.3 -42.9 -53.1 -7.6 -3.7 -0.2 60 240 A M T 3< S+ 0 0 92 -4,-1.9 -1,-0.3 1,-0.3 -2,-0.2 0.822 107.5 53.7 -56.2 -32.2 -8.4 -2.8 3.4 61 241 A E T <4 S+ 0 0 140 -3,-1.3 2,-0.8 -4,-0.4 -1,-0.3 0.713 89.0 92.6 -75.4 -21.2 -10.7 -5.8 3.4 62 242 A K << - 0 0 91 -3,-1.3 12,-0.4 -4,-1.2 3,-0.1 -0.659 67.2-154.9 -79.6 109.9 -7.8 -8.0 2.3 63 243 A K S S+ 0 0 127 -2,-0.8 2,-0.3 1,-0.1 -1,-0.2 0.903 80.0 8.8 -48.2 -47.6 -6.0 -9.4 5.3 64 244 A Y S S- 0 0 144 9,-0.2 2,-0.3 -3,-0.1 9,-0.2 -0.973 71.1-145.1-138.3 151.8 -2.8 -9.7 3.3 65 245 A H - 0 0 0 7,-2.0 2,-0.4 -2,-0.3 7,-0.3 -0.837 1.1-155.5-116.7 154.9 -1.6 -8.7 -0.1 66 246 A N - 0 0 79 -2,-0.3 2,-0.7 5,-0.3 5,-0.3 -0.908 8.9-174.1-134.3 105.2 0.7 -10.3 -2.6 67 247 A V B > -D 70 0B 0 3,-3.0 3,-2.0 -2,-0.4 2,-1.8 -0.868 61.4 -68.7-103.6 106.9 2.5 -8.1 -5.1 68 248 A G T 3 S- 0 0 59 -2,-0.7 -55,-0.0 1,-0.3 3,-0.0 -0.239 124.6 -11.1 52.0 -83.1 4.5 -10.1 -7.7 69 249 A L T 3 S+ 0 0 101 -2,-1.8 -1,-0.3 0, 0.0 2,-0.1 0.690 126.5 78.0-111.1 -38.3 7.0 -11.4 -5.2 70 250 A S B < -D 67 0B 1 -3,-2.0 -3,-3.0 -4,-0.1 2,-0.3 -0.402 55.0-169.2 -77.2 153.2 6.3 -9.3 -2.2 71 251 A K + 0 0 125 -63,-0.3 2,-0.3 -5,-0.3 -5,-0.3 -0.893 15.5 166.4-147.0 107.1 3.3 -9.9 0.2 72 252 A C - 0 0 2 -2,-0.3 -7,-2.0 -7,-0.3 2,-0.7 -0.919 41.7-103.9-128.2 153.4 2.4 -7.2 2.8 73 253 A E E -B 7 0A 46 -66,-3.7 -66,-1.5 -2,-0.3 2,-0.7 -0.627 37.3-154.0 -76.0 109.6 -0.5 -6.5 5.1 74 254 A I E +B 6 0A 2 -2,-0.7 2,-0.4 -12,-0.4 -68,-0.3 -0.780 22.6 165.4 -96.5 115.2 -2.5 -3.6 3.6 75 255 A K E -B 5 0A 100 -70,-3.1 -70,-2.4 -2,-0.7 -15,-0.1 -0.972 58.8 -74.8-121.0 131.8 -4.5 -1.5 6.0 76 256 A V - 0 0 63 -2,-0.4 -72,-0.4 -72,-0.3 2,-0.1 0.050 60.1-127.0 -32.9 121.8 -5.8 1.9 4.8 77 257 A A - 0 0 10 -29,-0.3 2,-0.4 -74,-0.2 -74,-0.3 -0.337 17.4-150.8 -75.8 155.5 -2.7 4.1 4.7 78 258 A M 0 0 161 -2,-0.1 -74,-0.0 -76,-0.1 -1,-0.0 -0.993 360.0 360.0-133.9 125.2 -2.5 7.5 6.4 79 259 A S 0 0 136 -2,-0.4 -76,-0.0 -76,-0.0 0, 0.0 -0.752 360.0 360.0-108.4 360.0 -0.3 10.3 5.2