==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 10-MAY-05 1X3U . COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATORY PROTEIN FIXJ; . SOURCE 2 ORGANISM_SCIENTIFIC: SINORHIZOBIUM MELILOTI; . AUTHOR K.KURASHIMA-ITO,Y.KASAI,K.HOSONO,K.TAMURA,S.OUE,M.ISOGAI, . 79 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4915.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 75.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 8.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 43 54.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 5 6.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 126 A G 0 0 83 0, 0.0 3,-0.1 0, 0.0 4,-0.1 0.000 360.0 360.0 360.0 41.0 16.4 0.1 8.2 2 127 A S + 0 0 92 1,-0.4 2,-0.4 2,-0.1 3,-0.1 0.879 360.0 5.9 -95.5 -54.2 15.4 3.5 7.0 3 128 A H S S- 0 0 99 1,-0.2 -1,-0.4 56,-0.0 58,-0.2 -0.998 113.7 -21.7-137.3 139.1 13.7 2.8 3.7 4 129 A M - 0 0 86 56,-1.9 -1,-0.2 -2,-0.4 2,-0.1 0.224 58.9-165.3 51.2 176.2 12.8 -0.5 1.9 5 130 A D - 0 0 63 1,-0.6 5,-0.4 -4,-0.1 -1,-0.1 -0.450 41.5 -29.3 163.4 120.8 14.7 -3.8 2.8 6 131 A D - 0 0 127 3,-0.2 -1,-0.6 -2,-0.1 4,-0.1 0.232 67.5 -99.8 49.1 179.6 15.0 -7.2 1.2 7 132 A A S >> S+ 0 0 42 2,-0.1 4,-1.5 3,-0.1 3,-0.6 0.883 115.5 32.4 -96.9 -64.3 12.3 -8.7 -1.0 8 133 A N H 3> S+ 0 0 109 1,-0.2 4,-2.6 2,-0.2 5,-0.3 0.823 111.3 66.9 -65.0 -30.7 10.3 -11.1 1.2 9 134 A D H 3> S+ 0 0 71 1,-0.2 4,-1.1 2,-0.2 -1,-0.2 0.904 101.3 49.9 -56.3 -39.5 11.0 -8.9 4.2 10 135 A I H X> S+ 0 0 10 -3,-0.6 4,-3.3 -5,-0.4 3,-0.6 0.970 109.8 49.5 -61.5 -55.7 8.8 -6.4 2.5 11 136 A R H 3X S+ 0 0 106 -4,-1.5 4,-1.1 1,-0.3 3,-0.3 0.955 110.5 48.1 -47.0 -64.6 6.0 -8.9 1.8 12 137 A A H 3X S+ 0 0 46 -4,-2.6 4,-1.8 1,-0.3 -1,-0.3 0.783 116.3 47.9 -49.1 -26.9 6.0 -10.2 5.4 13 138 A R H X - 0 0 59 -4,-0.5 4,-2.2 1,-0.1 3,-1.8 -0.926 31.8 -78.0 171.6 167.1 -2.3 -3.5 8.8 19 144 A E H 3> S+ 0 0 99 1,-0.3 4,-2.8 -2,-0.3 5,-0.2 0.887 126.3 60.3 -49.0 -43.3 -5.5 -3.9 6.8 20 145 A R H 3> S+ 0 0 95 2,-0.2 4,-1.9 1,-0.2 5,-0.3 0.827 110.2 43.2 -54.8 -32.7 -5.1 -0.3 5.6 21 146 A E H <> S+ 0 0 2 -3,-1.8 4,-2.7 2,-0.2 5,-0.4 0.970 116.6 41.9 -77.4 -60.0 -1.8 -1.4 4.1 22 147 A R H X S+ 0 0 78 -4,-2.2 4,-0.9 -8,-0.2 -2,-0.2 0.751 120.7 50.6 -58.8 -23.1 -2.9 -4.7 2.6 23 148 A Q H X S+ 0 0 32 -4,-2.8 4,-0.8 -5,-0.4 -2,-0.2 0.979 117.8 29.3 -77.9 -73.0 -6.0 -2.8 1.5 24 149 A V H X S+ 0 0 3 -4,-1.9 4,-3.6 1,-0.2 3,-0.5 0.848 120.6 57.3 -57.7 -36.1 -4.7 0.3 -0.2 25 150 A L H X S+ 0 0 0 -4,-2.7 4,-3.9 -5,-0.3 -1,-0.2 0.950 103.2 50.7 -61.4 -50.8 -1.6 -1.4 -1.3 26 151 A S H < S+ 0 0 54 -4,-0.9 -1,-0.2 -5,-0.4 -2,-0.2 0.675 118.6 41.3 -62.6 -14.2 -3.4 -4.2 -3.1 27 152 A A H >X>S+ 0 0 1 -4,-0.8 4,-1.8 -3,-0.5 5,-1.2 0.790 114.9 49.2 -97.0 -38.4 -5.3 -1.3 -4.8 28 153 A V H 3<5S+ 0 0 7 -4,-3.6 -2,-0.2 1,-0.2 -3,-0.2 0.843 96.9 71.8 -66.6 -36.1 -2.2 0.8 -5.2 29 154 A V T 3<5S+ 0 0 18 -4,-3.9 -1,-0.2 1,-0.2 -3,-0.1 0.789 107.4 36.7 -50.7 -30.8 -0.4 -2.2 -6.7 30 155 A A T <45S- 0 0 67 -3,-0.8 -1,-0.2 -5,-0.2 -2,-0.2 0.890 107.9-122.8 -89.6 -48.8 -2.6 -1.7 -9.8 31 156 A G T <5 + 0 0 59 -4,-1.8 -3,-0.2 1,-0.1 -2,-0.1 0.676 50.4 158.0 109.6 26.9 -2.7 2.1 -9.9 32 157 A L < - 0 0 77 -5,-1.2 -1,-0.1 1,-0.2 -5,-0.0 -0.230 48.9 -75.7 -76.4 169.3 -6.5 2.7 -9.8 33 158 A P > - 0 0 81 0, 0.0 4,-2.0 0, 0.0 5,-0.2 -0.158 40.4-110.5 -62.9 159.6 -8.1 6.0 -8.6 34 159 A N H > S+ 0 0 76 2,-0.2 4,-2.0 1,-0.2 14,-0.2 0.777 118.1 51.2 -62.0 -26.5 -8.3 6.9 -5.0 35 160 A K H > S+ 0 0 151 2,-0.2 4,-3.0 3,-0.2 5,-0.4 0.985 108.6 44.6 -74.5 -63.8 -12.1 6.3 -5.2 36 161 A S H > S+ 0 0 67 1,-0.2 4,-2.5 2,-0.2 -2,-0.2 0.851 117.6 50.4 -48.9 -36.8 -12.2 2.9 -6.7 37 162 A I H X S+ 0 0 7 -4,-2.0 4,-1.2 2,-0.2 -1,-0.2 0.972 109.7 46.2 -66.0 -57.6 -9.5 1.9 -4.3 38 163 A A H <>S+ 0 0 0 -4,-2.0 5,-2.5 1,-0.2 -2,-0.2 0.867 122.0 39.0 -55.1 -38.3 -11.2 3.3 -1.2 39 164 A Y H ><5S+ 0 0 186 -4,-3.0 3,-1.7 3,-0.2 -1,-0.2 0.820 105.7 64.7 -83.3 -29.5 -14.3 1.6 -2.2 40 165 A D H 3<5S+ 0 0 100 -4,-2.5 -2,-0.2 -5,-0.4 -1,-0.2 0.718 110.4 41.9 -63.2 -17.9 -12.5 -1.5 -3.5 41 166 A L T 3<5S- 0 0 16 -4,-1.2 -1,-0.3 -3,-0.2 -2,-0.1 -0.263 124.2-101.2-122.7 44.0 -11.6 -2.0 0.1 42 167 A D T < 5S+ 0 0 146 -3,-1.7 2,-0.3 1,-0.1 -3,-0.2 0.857 89.6 98.1 37.2 56.7 -15.0 -1.1 1.7 43 168 A I S > - 0 0 59 -2,-0.3 4,-1.7 1,-0.1 3,-1.0 -0.571 30.7-121.9 -91.3 155.2 -13.8 6.1 1.7 45 170 A P H 3> S+ 0 0 46 0, 0.0 4,-1.9 0, 0.0 5,-0.1 0.801 114.5 60.7 -64.3 -28.2 -11.2 7.9 -0.5 46 171 A R H 3> S+ 0 0 206 2,-0.2 4,-0.9 1,-0.2 5,-0.1 0.763 104.6 51.5 -69.4 -23.4 -10.4 10.2 2.3 47 172 A T H X> S+ 0 0 34 -3,-1.0 4,-4.1 2,-0.2 3,-0.5 0.941 106.5 49.3 -77.9 -50.9 -9.4 7.1 4.2 48 173 A V H 3X S+ 0 0 3 -4,-1.7 4,-3.1 1,-0.3 5,-0.5 0.874 106.7 58.9 -56.5 -35.0 -7.1 5.7 1.6 49 174 A E H 3X S+ 0 0 114 -4,-1.9 4,-1.3 2,-0.2 -1,-0.3 0.911 115.5 35.0 -59.1 -40.8 -5.5 9.2 1.5 50 175 A V H X S+ 0 0 33 -4,-4.1 4,-4.2 2,-0.2 3,-0.7 0.964 115.4 49.3 -53.1 -60.0 -4.1 5.0 5.1 52 177 A R H 3X>S+ 0 0 62 -4,-3.1 4,-2.4 1,-0.3 5,-0.5 0.943 110.9 46.9 -44.2 -69.0 -2.0 5.3 1.9 53 178 A A H 3X5S+ 0 0 46 -4,-1.3 4,-0.6 -5,-0.5 -1,-0.3 0.781 119.3 45.1 -46.9 -28.1 0.2 8.1 3.1 54 179 A N H S+ 0 0 20 -4,-2.4 5,-1.2 1,-0.2 4,-0.3 0.801 118.5 53.1 -64.9 -28.8 4.1 4.1 2.5 57 182 A A H < S- 0 0 55 1,-0.1 4,-3.2 -7,-0.1 -1,-0.6 -0.896 80.3 -82.7-150.0 177.8 6.2 7.0 -3.3 64 189 A L H > S+ 0 0 67 -2,-0.3 4,-1.8 1,-0.2 5,-0.4 0.945 129.6 44.8 -52.0 -51.9 3.5 5.3 -5.3 65 190 A P H > S+ 0 0 72 0, 0.0 4,-3.5 0, 0.0 5,-0.2 0.945 113.3 50.0 -57.2 -51.9 6.2 3.6 -7.5 66 191 A H H > S+ 0 0 47 2,-0.2 4,-3.9 3,-0.2 5,-0.3 0.943 111.0 50.4 -52.8 -53.4 8.3 2.6 -4.4 67 192 A L H X S+ 0 0 0 -4,-3.2 4,-2.4 2,-0.2 3,-0.4 0.965 118.0 35.2 -47.2 -76.0 5.3 1.2 -2.6 68 193 A V H X S+ 0 0 22 -4,-1.8 4,-4.1 1,-0.3 5,-0.5 0.879 116.7 57.0 -47.9 -43.2 4.0 -1.0 -5.4 69 194 A R H X S+ 0 0 174 -4,-3.5 4,-3.5 -5,-0.4 -1,-0.3 0.939 111.3 41.6 -55.7 -46.3 7.6 -1.7 -6.4 70 195 A M H X S+ 0 0 7 -4,-3.9 4,-0.7 -3,-0.4 -1,-0.3 0.791 114.3 56.3 -69.3 -25.9 8.2 -2.9 -2.9 71 196 A A H >X>S+ 0 0 0 -4,-2.4 5,-4.2 -5,-0.3 4,-1.1 0.969 118.0 29.5 -68.7 -55.2 4.8 -4.6 -3.3 72 197 A L H 3<5S+ 0 0 88 -4,-4.1 5,-0.2 4,-0.3 -2,-0.2 0.870 107.8 73.4 -72.5 -36.0 5.8 -6.6 -6.4 73 198 A A H 3<5S+ 0 0 58 -4,-3.5 -1,-0.2 -5,-0.5 -2,-0.2 0.814 117.7 19.4 -45.3 -31.4 9.4 -6.6 -5.3 74 199 A G H <<5S- 0 0 25 -4,-0.7 -2,-0.2 -3,-0.6 -66,-0.1 0.765 132.1 -60.0-102.5 -87.7 8.1 -9.2 -2.9 75 200 A G T <5S+ 0 0 33 -4,-1.1 2,-0.6 -5,-0.2 -3,-0.2 0.243 98.2 104.7-151.6 12.1 4.7 -10.8 -3.7 76 201 A F < + 0 0 38 -5,-4.2 -4,-0.3 -6,-0.2 -3,-0.1 -0.340 48.7 122.3 -96.1 51.8 2.2 -8.0 -4.0 77 202 A G - 0 0 38 -2,-0.6 2,-0.9 -6,-0.2 -47,-0.1 -0.931 58.4-138.7-119.9 111.7 2.0 -8.0 -7.8 78 203 A P 0 0 81 0, 0.0 -2,-0.1 0, 0.0 -6,-0.0 -0.528 360.0 360.0 -69.5 102.9 -1.4 -8.5 -9.5 79 204 A S 0 0 195 -2,-0.9 -2,-0.0 0, 0.0 0, 0.0 -0.510 360.0 360.0 -65.5 360.0 -0.6 -10.8 -12.4