==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 14-MAY-05 1X4J . COMPND 2 MOLECULE: RING FINGER PROTEIN 38; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA, . 75 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5503.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 37 49.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 14.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 12.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 12.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 120 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-111.9 -16.5 -9.9 25.2 2 2 A S + 0 0 137 1,-0.0 2,-0.3 2,-0.0 0, 0.0 -0.133 360.0 166.5 -47.7 136.9 -17.6 -8.3 21.9 3 3 A S + 0 0 117 2,-0.0 2,-0.2 0, 0.0 -1,-0.0 -0.986 11.0 149.5-157.2 146.6 -15.6 -9.8 19.0 4 4 A G + 0 0 70 -2,-0.3 2,-0.3 0, 0.0 -2,-0.0 -0.678 1.6 159.4 178.4 123.8 -15.8 -9.9 15.2 5 5 A S - 0 0 123 -2,-0.2 4,-0.1 1,-0.1 -2,-0.0 -0.852 18.0-169.0-156.6 115.0 -13.4 -10.1 12.3 6 6 A S - 0 0 122 -2,-0.3 -1,-0.1 2,-0.2 0, 0.0 0.946 63.4 -88.1 -67.9 -50.0 -14.1 -11.2 8.7 7 7 A G S S+ 0 0 24 1,-0.4 2,-0.3 65,-0.1 -2,-0.0 0.492 91.6 88.2 143.6 33.3 -10.5 -11.5 7.7 8 8 A Q S S- 0 0 138 65,-0.0 -1,-0.4 64,-0.0 -2,-0.2 -0.982 70.7-103.6-150.1 158.2 -9.3 -8.1 6.5 9 9 A L - 0 0 39 -2,-0.3 2,-0.2 1,-0.1 33,-0.1 -0.533 44.4 -97.9 -84.7 150.3 -7.8 -4.8 7.7 10 10 A P - 0 0 80 0, 0.0 2,-0.5 0, 0.0 31,-0.4 -0.486 34.8-144.8 -69.8 128.9 -9.8 -1.6 8.2 11 11 A S + 0 0 75 -2,-0.2 2,-0.3 29,-0.1 29,-0.2 -0.840 33.1 147.1-100.3 127.9 -9.5 0.8 5.3 12 12 A Y E -A 39 0A 60 27,-1.0 27,-1.5 -2,-0.5 2,-0.4 -0.991 46.0-108.9-157.1 151.2 -9.5 4.5 6.0 13 13 A R E -A 38 0A 158 -2,-0.3 25,-0.2 25,-0.2 22,-0.1 -0.704 44.6-105.0 -86.9 129.8 -8.0 7.8 4.7 14 14 A F B -c 35 0B 28 23,-0.9 22,-1.1 20,-0.5 23,-0.1 -0.021 30.4-140.9 -47.5 153.9 -5.4 9.4 6.9 15 15 A N - 0 0 67 3,-0.3 5,-0.2 20,-0.2 -1,-0.1 -0.942 14.3-165.2-129.2 111.5 -6.5 12.5 8.9 16 16 A P S S+ 0 0 98 0, 0.0 3,-0.2 0, 0.0 -1,-0.1 0.503 94.4 50.8 -69.7 -2.9 -4.2 15.5 9.3 17 17 A N S S+ 0 0 150 1,-0.3 2,-0.7 -3,-0.0 -3,-0.0 0.824 112.9 38.7-100.4 -46.3 -6.5 16.7 12.0 18 18 A N S S- 0 0 84 3,-0.0 2,-2.1 1,-0.0 -3,-0.3 -0.881 71.5-153.9-113.1 101.6 -6.9 13.6 14.2 19 19 A H - 0 0 94 -2,-0.7 -5,-0.0 1,-0.2 4,-0.0 -0.500 8.6-170.5 -74.2 80.8 -3.6 11.7 14.6 20 20 A Q S S+ 0 0 73 -2,-2.1 2,-0.4 -5,-0.2 -1,-0.2 0.807 79.5 33.5 -40.5 -35.3 -5.2 8.3 15.3 21 21 A S S S- 0 0 31 1,-0.1 -1,-0.2 -3,-0.1 25,-0.0 -0.984 80.6-133.9-131.2 123.8 -1.6 7.2 16.2 22 22 A E S S+ 0 0 184 -2,-0.4 2,-0.5 1,-0.2 -1,-0.1 0.857 102.1 34.1 -36.7 -49.5 1.0 9.5 17.7 23 23 A Q - 0 0 98 -3,-0.1 2,-0.5 2,-0.0 24,-0.3 -0.954 69.7-178.4-117.5 122.1 3.5 8.2 15.1 24 24 A T + 0 0 22 -2,-0.5 9,-0.5 22,-0.1 2,-0.3 -0.891 24.3 136.7-123.1 101.3 2.3 7.3 11.6 25 25 A L E -D 32 0C 63 -2,-0.5 2,-0.8 7,-0.2 22,-0.2 -0.978 49.8-121.8-142.6 154.3 5.0 6.0 9.3 26 26 A C E > -D 31 0C 0 5,-1.3 5,-0.9 -2,-0.3 4,-0.5 -0.852 14.7-169.7-101.7 107.1 5.3 3.2 6.7 27 27 A V T 5S+ 0 0 43 -2,-0.8 -1,-0.2 20,-0.4 21,-0.1 0.732 86.0 62.2 -64.7 -21.7 8.1 0.8 7.6 28 28 A V T 5S+ 0 0 54 1,-0.2 -1,-0.2 3,-0.1 20,-0.0 0.985 123.9 12.9 -67.7 -60.5 7.7 -0.7 4.1 29 29 A C T 5S- 0 0 59 2,-0.2 -1,-0.2 0, 0.0 -2,-0.2 0.045 97.8-125.8-105.2 23.8 8.6 2.3 2.0 30 30 A M T 5S+ 0 0 128 -4,-0.5 2,-0.4 1,-0.1 -3,-0.2 0.806 73.6 123.0 33.8 40.7 10.0 4.2 5.0 31 31 A C E < -D 26 0C 57 -5,-0.9 -5,-1.3 0, 0.0 -2,-0.2 -0.980 63.6-117.4-132.4 143.5 7.6 7.0 4.0 32 32 A D E -D 25 0C 85 -2,-0.4 2,-0.3 -7,-0.2 -7,-0.2 -0.270 33.5-108.0 -73.1 162.4 4.8 8.7 5.9 33 33 A F - 0 0 8 -9,-0.5 2,-0.2 4,-0.0 -1,-0.1 -0.726 28.2-142.0 -95.6 142.8 1.1 8.5 4.8 34 34 A E > - 0 0 83 -2,-0.3 -20,-0.5 1,-0.1 3,-0.5 -0.535 27.7 -89.7 -98.6 166.9 -0.7 11.4 3.3 35 35 A S B 3 S+c 14 0B 50 1,-0.2 -20,-0.2 -2,-0.2 -1,-0.1 -0.376 107.1 26.0 -74.3 153.6 -4.3 12.5 3.8 36 36 A R T 3 S+ 0 0 217 -22,-1.1 2,-0.4 1,-0.2 -1,-0.2 0.883 95.8 128.0 61.5 39.6 -7.1 11.2 1.6 37 37 A Q < - 0 0 66 -3,-0.5 2,-1.0 -23,-0.1 -23,-0.9 -0.983 69.5-109.9-130.7 140.0 -5.1 8.0 0.9 38 38 A L E +A 13 0A 99 -2,-0.4 12,-1.2 -25,-0.2 13,-0.3 -0.533 53.5 164.9 -69.6 101.8 -6.1 4.4 1.2 39 39 A L E -AB 12 49A 3 -27,-1.5 -27,-1.0 -2,-1.0 2,-0.3 -0.613 23.2-144.6-113.3 174.6 -4.0 3.2 4.2 40 40 A R E - B 0 48A 45 8,-3.1 8,-3.2 -2,-0.2 2,-0.4 -0.936 3.1-145.9-138.7 160.7 -4.1 0.2 6.6 41 41 A V E - B 0 47A 29 -31,-0.4 6,-0.2 -2,-0.3 4,-0.1 -0.946 19.1-135.0-134.3 113.6 -3.5 -0.6 10.2 42 42 A L E >> - B 0 46A 5 4,-2.6 3,-1.6 -2,-0.4 4,-0.8 -0.151 28.9-109.2 -60.9 157.8 -2.0 -3.9 11.4 43 43 A P T 34 S+ 0 0 82 0, 0.0 -1,-0.1 0, 0.0 26,-0.0 0.410 116.1 67.6 -69.7 4.3 -3.6 -5.7 14.4 44 44 A C T 34 S- 0 0 25 2,-0.2 -2,-0.1 24,-0.1 25,-0.0 0.166 124.8 -95.3-108.9 15.1 -0.4 -4.8 16.3 45 45 A N T <4 S+ 0 0 136 -3,-1.6 2,-0.4 1,-0.2 -4,-0.0 0.954 81.9 133.9 70.9 52.1 -1.2 -1.0 16.3 46 46 A H E < -B 42 0A 38 -4,-0.8 -4,-2.6 -22,-0.0 2,-0.3 -0.998 48.9-134.8-137.0 137.0 0.9 -0.2 13.2 47 47 A E E +B 41 0A 5 -2,-0.4 -20,-0.4 -24,-0.3 2,-0.3 -0.659 31.3 163.8 -90.9 144.8 0.1 2.0 10.2 48 48 A F E -B 40 0A 0 -8,-3.2 -8,-3.1 -2,-0.3 2,-0.5 -0.933 40.7 -89.7-150.5 171.5 0.9 0.9 6.7 49 49 A H E >> -B 39 0A 15 -2,-0.3 4,-1.5 -10,-0.2 5,-0.7 -0.783 27.6-133.5 -92.8 125.1 0.1 1.6 3.0 50 50 A A T 45S+ 0 0 8 -12,-1.2 4,-0.1 -2,-0.5 -11,-0.1 0.758 112.4 40.2 -44.5 -26.3 -2.8 -0.4 1.5 51 51 A K T >5S+ 0 0 152 -13,-0.3 4,-1.4 2,-0.1 -1,-0.2 0.899 116.9 45.3 -89.7 -50.9 -0.4 -1.0 -1.4 52 52 A C H >>5S+ 0 0 18 1,-0.2 4,-2.2 2,-0.2 3,-2.2 0.988 114.1 46.0 -56.1 -68.6 2.9 -1.6 0.5 53 53 A V H 3X5S+ 0 0 1 -4,-1.5 4,-2.6 1,-0.3 5,-0.3 0.803 109.3 60.1 -45.3 -32.4 1.5 -4.0 3.2 54 54 A D H 3>X S+ 0 0 79 -4,-2.2 4,-3.0 2,-0.2 3,-1.8 0.982 107.2 53.1 -71.7 -60.3 4.8 -7.4 2.0 57 57 A L H 3< S+ 0 0 35 -4,-2.6 -1,-0.2 1,-0.3 -3,-0.2 0.854 103.2 61.7 -42.8 -42.0 2.1 -9.7 3.4 58 58 A K H 3< S+ 0 0 183 -4,-0.8 -1,-0.3 -5,-0.3 -2,-0.2 0.887 114.8 32.5 -53.8 -42.0 2.2 -11.6 0.1 59 59 A A H << S+ 0 0 74 -3,-1.8 2,-0.4 -4,-0.8 -2,-0.2 0.907 137.7 16.1 -81.8 -46.6 5.9 -12.4 0.8 60 60 A N < - 0 0 78 -4,-3.0 2,-2.3 2,-0.2 -1,-0.3 -0.965 63.6-146.9-135.4 118.2 5.6 -12.6 4.6 61 61 A R S S+ 0 0 116 -2,-0.4 10,-0.6 -3,-0.2 9,-0.5 -0.246 75.4 82.0 -76.7 52.3 2.4 -13.0 6.5 62 62 A T S S- 0 0 41 -2,-2.3 7,-0.2 7,-0.2 -2,-0.2 -0.911 90.1 -82.3-147.3 172.8 3.8 -10.9 9.4 63 63 A C > - 0 0 0 5,-0.3 4,-1.4 -2,-0.3 5,-0.1 -0.719 25.3-151.1 -86.4 120.2 4.5 -7.4 10.5 64 64 A P T 4 S+ 0 0 32 0, 0.0 -1,-0.1 0, 0.0 -11,-0.0 0.369 95.4 46.2 -69.8 7.4 7.7 -5.9 9.0 65 65 A I T 4 S+ 0 0 60 3,-0.1 -2,-0.0 -19,-0.0 -19,-0.0 0.759 131.1 9.2-111.8 -65.3 7.9 -3.8 12.2 66 66 A C T 4 S- 0 0 56 2,-0.1 3,-0.1 0, 0.0 -3,-0.1 0.039 89.6-126.6-107.5 23.8 7.3 -5.9 15.3 67 67 A R < + 0 0 212 -4,-1.4 2,-0.8 1,-0.2 0, 0.0 0.763 54.1 162.6 35.2 30.8 7.4 -9.2 13.4 68 68 A A - 0 0 34 -5,-0.1 -5,-0.3 1,-0.1 -1,-0.2 -0.708 48.4-112.9 -83.8 110.4 4.0 -9.7 15.1 69 69 A D - 0 0 101 -2,-0.8 -7,-0.2 -7,-0.2 -1,-0.1 -0.162 25.7-157.8 -43.8 112.0 2.1 -12.4 13.3 70 70 A S - 0 0 21 -9,-0.5 -1,-0.2 1,-0.2 -8,-0.1 0.948 20.9-148.9 -61.1 -51.1 -0.8 -10.6 11.7 71 71 A G + 0 0 27 -10,-0.6 -1,-0.2 1,-0.1 -10,-0.0 -0.865 59.5 53.5 123.1 -99.9 -3.0 -13.6 11.5 72 72 A P - 0 0 82 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.185 63.6-154.5 -69.7 165.0 -5.4 -13.7 8.5 73 73 A S - 0 0 67 1,-0.1 -65,-0.0 -3,-0.1 -12,-0.0 -0.989 19.5-148.6-147.6 134.9 -4.4 -13.2 4.9 74 74 A S 0 0 100 -2,-0.3 -1,-0.1 -20,-0.0 -66,-0.0 0.891 360.0 360.0 -67.5 -40.6 -6.3 -12.0 1.8 75 75 A G 0 0 93 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.312 360.0 360.0-155.5 360.0 -4.2 -14.2 -0.5