==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 14-MAY-05 1X4N . COMPND 2 MOLECULE: FAR UPSTREAM ELEMENT BINDING PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA, . 92 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7284.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 64.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 15.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 8.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 7.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 30.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 133 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 107.9 -13.3 -33.0 -18.1 2 2 A S - 0 0 131 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.877 360.0-156.0-140.5 171.0 -10.8 -32.6 -15.2 3 3 A S - 0 0 122 -2,-0.3 0, 0.0 0, 0.0 0, 0.0 -0.988 18.7-119.5-153.3 143.8 -8.2 -30.2 -13.9 4 4 A G - 0 0 71 -2,-0.3 0, 0.0 1,-0.1 0, 0.0 -0.012 15.6-168.3 -71.9-178.1 -5.2 -30.5 -11.7 5 5 A S + 0 0 124 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.485 15.0 174.6-136.2 -62.1 -4.7 -28.7 -8.4 6 6 A S - 0 0 130 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.140 15.5-146.6 65.1 171.5 -1.1 -28.9 -7.1 7 7 A G + 0 0 63 1,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.103 37.3 146.3-137.5-123.8 0.1 -27.1 -4.0 8 8 A H + 0 0 188 1,-0.2 2,-0.3 -2,-0.1 -1,-0.0 0.993 42.6 126.7 71.7 73.7 3.4 -25.5 -3.0 9 9 A Q + 0 0 163 2,-0.0 2,-0.3 0, 0.0 -1,-0.2 -0.888 18.7 129.8-163.4 128.5 2.3 -22.6 -0.9 10 10 A Q - 0 0 161 -2,-0.3 2,-0.3 2,-0.0 0, 0.0 -0.972 26.5-152.5-168.7 168.7 3.2 -21.4 2.6 11 11 A Q + 0 0 131 -2,-0.3 2,-0.3 56,-0.0 3,-0.1 -0.941 11.7 170.6-148.1 166.5 4.3 -18.4 4.7 12 12 A R + 0 0 219 1,-0.5 -2,-0.0 -2,-0.3 54,-0.0 -0.855 49.1 22.4-178.3 142.5 6.2 -17.6 7.9 13 13 A S - 0 0 86 -2,-0.3 -1,-0.5 1,-0.1 2,-0.4 0.649 63.7-137.2 64.5 131.0 7.6 -14.6 9.7 14 14 A V - 0 0 101 -3,-0.1 2,-0.3 53,-0.1 53,-0.2 -0.937 16.0-166.1-122.9 144.9 6.2 -11.2 9.0 15 15 A M E -A 66 0A 57 51,-1.6 51,-1.5 -2,-0.4 2,-0.4 -0.889 15.4-129.0-128.5 158.7 8.1 -7.9 8.6 16 16 A T E -A 65 0A 87 -2,-0.3 2,-0.4 49,-0.2 49,-0.2 -0.907 22.5-173.3-111.6 135.6 7.2 -4.2 8.5 17 17 A E E -A 64 0A 70 47,-1.4 47,-2.2 -2,-0.4 2,-0.7 -0.955 18.8-138.6-128.6 146.8 8.2 -1.8 5.8 18 18 A E E +A 63 0A 129 -2,-0.4 2,-0.5 45,-0.2 45,-0.2 -0.907 26.0 176.5-108.9 109.3 7.8 1.9 5.4 19 19 A Y E -A 62 0A 27 43,-1.5 43,-2.1 -2,-0.7 2,-0.4 -0.949 15.8-151.2-116.7 131.3 6.8 3.1 2.0 20 20 A K E -A 61 0A 116 -2,-0.5 41,-0.2 41,-0.2 -2,-0.0 -0.815 16.2-176.8-101.9 139.3 6.1 6.7 1.0 21 21 A V E -A 60 0A 3 39,-1.2 39,-2.6 -2,-0.4 2,-0.5 -0.908 35.9 -91.5-132.6 159.5 3.6 7.5 -1.7 22 22 A P E >> -A 59 0A 40 0, 0.0 3,-3.7 0, 0.0 4,-2.8 -0.605 24.5-146.0 -75.1 117.8 2.4 10.8 -3.4 23 23 A D H 3> S+ 0 0 96 35,-1.8 4,-1.2 -2,-0.5 36,-0.1 0.756 101.5 68.1 -52.2 -24.6 -0.6 12.1 -1.7 24 24 A G H 34 S+ 0 0 59 34,-0.4 -1,-0.3 1,-0.2 35,-0.1 0.453 115.3 25.3 -75.1 -0.4 -1.6 13.2 -5.1 25 25 A M H X> S+ 0 0 22 -3,-3.7 3,-2.7 2,-0.1 4,-1.8 0.606 106.7 70.9-127.6 -43.0 -1.9 9.5 -6.0 26 26 A V H >X S+ 0 0 4 -4,-2.8 4,-2.3 1,-0.3 3,-0.6 0.897 94.6 60.6 -44.2 -49.8 -2.7 7.7 -2.7 27 27 A G H 3X S+ 0 0 51 -4,-1.2 4,-0.7 1,-0.3 -1,-0.3 0.782 112.8 38.4 -49.6 -29.8 -6.1 9.3 -2.8 28 28 A F H <4 S+ 0 0 99 -3,-2.7 -1,-0.3 2,-0.2 -2,-0.3 0.650 106.0 66.9 -94.5 -20.5 -6.5 7.5 -6.0 29 29 A I H << S+ 0 0 0 -4,-1.8 -2,-0.2 -3,-0.6 -3,-0.2 0.902 97.2 54.8 -65.9 -42.7 -4.7 4.3 -4.8 30 30 A I H < S- 0 0 51 -4,-2.3 7,-2.0 6,-0.2 6,-1.1 0.962 94.0-170.3 -54.0 -58.1 -7.5 3.7 -2.3 31 31 A G < - 0 0 30 -4,-0.7 2,-1.4 5,-0.2 3,-0.2 -0.532 44.3 -21.2 97.4-165.5 -10.2 3.7 -5.0 32 32 A R S S- 0 0 202 1,-0.2 -1,-0.1 -2,-0.2 -4,-0.0 -0.663 141.0 -13.9 -84.4 89.7 -14.0 3.7 -4.7 33 33 A G S S- 0 0 89 -2,-1.4 -1,-0.2 1,-0.1 -2,-0.1 0.415 124.3 -65.5 97.1 1.8 -14.4 2.3 -1.2 34 34 A G S > S+ 0 0 18 -3,-0.2 4,-0.9 3,-0.0 -3,-0.2 0.803 101.8 126.3 87.5 34.5 -10.8 1.1 -1.1 35 35 A E H > + 0 0 104 2,-0.2 4,-2.1 3,-0.1 -4,-0.2 0.767 65.6 60.5 -90.6 -31.5 -11.1 -1.4 -3.9 36 36 A Q H > S+ 0 0 54 -6,-1.1 4,-0.5 1,-0.2 -5,-0.2 0.863 113.1 38.2 -63.2 -37.6 -8.2 -0.1 -5.9 37 37 A I H >> S+ 0 0 10 -7,-2.0 4,-2.6 2,-0.2 3,-0.7 0.844 109.2 62.4 -80.6 -37.2 -5.9 -0.8 -3.0 38 38 A S H 3X S+ 0 0 55 -4,-0.9 4,-2.8 -8,-0.4 5,-0.3 0.889 100.2 54.4 -54.1 -42.9 -7.6 -4.0 -2.1 39 39 A R H 3X S+ 0 0 167 -4,-2.1 4,-1.6 1,-0.2 -1,-0.3 0.821 110.1 47.2 -60.8 -32.2 -6.7 -5.4 -5.5 40 40 A I H - 0 0 36 -2,-0.4 2,-1.1 -3,-0.3 3,-0.5 0.713 36.6-146.0 -53.4 -20.2 -1.2 12.3 5.9 55 55 A G T 3 - 0 0 75 1,-0.2 -1,-0.2 -3,-0.1 5,-0.0 -0.767 60.0 -31.0 93.4 -96.4 -1.2 15.4 8.0 56 56 A G T 3 S+ 0 0 75 -2,-1.1 -1,-0.2 -3,-0.1 -2,-0.1 0.067 102.0 119.4-147.1 23.4 0.8 18.0 6.1 57 57 A L < - 0 0 109 -3,-0.5 -3,-0.1 1,-0.1 -34,-0.1 -0.621 63.5-133.2 -94.6 155.0 3.4 15.8 4.4 58 58 A P S S+ 0 0 74 0, 0.0 -35,-1.8 0, 0.0 2,-0.4 0.779 94.8 47.8 -75.1 -28.7 3.9 15.6 0.6 59 59 A E E S-A 22 0A 82 -37,-0.2 2,-0.6 -36,-0.1 -3,-0.1 -0.938 80.1-136.1-118.0 137.8 4.0 11.8 0.8 60 60 A R E -A 21 0A 34 -39,-2.6 -39,-1.2 -2,-0.4 2,-0.1 -0.829 22.5-131.1 -95.8 119.0 1.6 9.6 2.7 61 61 A S E -A 20 0A 38 -2,-0.6 -10,-1.2 -41,-0.2 2,-0.4 -0.380 18.6-160.4 -67.5 143.5 3.3 6.8 4.6 62 62 A C E -AB 19 50A 1 -43,-2.1 -43,-1.5 -12,-0.2 2,-0.6 -0.964 11.0-141.3-132.3 114.0 1.9 3.3 4.2 63 63 A M E -AB 18 49A 78 -14,-3.3 -14,-4.2 -2,-0.4 2,-0.3 -0.649 21.0-162.5 -78.2 114.9 2.6 0.6 6.7 64 64 A L E -AB 17 48A 0 -47,-2.2 -47,-1.4 -2,-0.6 2,-0.4 -0.753 8.1-174.8 -99.7 145.8 3.1 -2.7 5.0 65 65 A T E +AB 16 47A 46 -18,-1.3 -18,-2.4 -2,-0.3 2,-0.3 -0.985 38.6 47.9-144.5 129.5 3.0 -6.0 6.7 66 66 A G E S-A 15 0A 13 -51,-1.5 -51,-1.6 -2,-0.4 -20,-0.1 -0.913 87.9 -8.6 141.4-166.6 3.7 -9.5 5.5 67 67 A T > - 0 0 27 -2,-0.3 4,-1.7 -22,-0.2 -53,-0.1 -0.089 59.0-121.3 -58.2 161.8 6.4 -11.4 3.6 68 68 A P H > S+ 0 0 79 0, 0.0 4,-1.9 0, 0.0 5,-0.2 0.819 114.0 53.8 -75.0 -33.2 9.2 -9.5 1.9 69 69 A E H > S+ 0 0 166 1,-0.2 4,-1.5 2,-0.2 -23,-0.1 0.742 111.9 46.1 -71.7 -24.2 8.3 -10.9 -1.5 70 70 A S H > S+ 0 0 24 2,-0.2 4,-2.7 3,-0.2 -24,-0.3 0.823 107.3 56.2 -85.2 -36.3 4.8 -9.6 -1.0 71 71 A V H X S+ 0 0 0 -4,-1.7 4,-2.4 2,-0.2 -2,-0.2 0.919 113.1 41.8 -60.9 -45.7 5.9 -6.2 0.3 72 72 A Q H X S+ 0 0 86 -4,-1.9 4,-3.0 2,-0.2 5,-0.2 0.951 112.1 53.5 -66.2 -51.9 7.9 -5.7 -2.9 73 73 A S H X S+ 0 0 65 -4,-1.5 4,-1.4 1,-0.2 -2,-0.2 0.901 112.8 45.3 -48.8 -47.6 5.3 -7.1 -5.2 74 74 A A H >X S+ 0 0 0 -4,-2.7 4,-2.7 2,-0.2 3,-0.6 0.937 109.0 55.7 -62.3 -48.7 2.8 -4.7 -3.6 75 75 A K H 3X S+ 0 0 41 -4,-2.4 4,-3.0 1,-0.3 5,-0.4 0.918 103.5 55.1 -48.7 -50.7 5.2 -1.8 -3.8 76 76 A R H 3X S+ 0 0 199 -4,-3.0 4,-1.9 1,-0.2 -1,-0.3 0.868 109.3 48.2 -50.9 -40.9 5.6 -2.4 -7.6 77 77 A L H X S+ 0 0 125 -4,-3.9 3,-1.6 1,-0.3 4,-0.8 0.935 113.5 48.0 -53.7 -52.0 4.0 6.0 -12.5 84 84 A K H 3< S+ 0 0 175 -4,-4.6 -1,-0.3 1,-0.3 -2,-0.2 0.741 121.0 40.9 -61.2 -22.7 0.8 5.3 -14.5 85 85 A G T 3< S+ 0 0 35 -4,-1.4 -1,-0.3 -3,-0.4 -2,-0.2 -0.310 98.1 80.0-121.1 46.9 -0.4 8.6 -12.9 86 86 A R T <4 S- 0 0 197 -3,-1.6 2,-0.3 1,-0.3 -2,-0.1 0.728 102.8 -41.6-114.7 -51.2 2.8 10.6 -13.1 87 87 A S < - 0 0 110 -4,-0.8 -1,-0.3 3,-0.0 -2,-0.0 -0.891 50.7-114.1-179.4 150.4 3.0 12.0 -16.6 88 88 A G - 0 0 58 -2,-0.3 2,-2.6 -3,-0.1 3,-0.2 -0.599 39.0-100.3 -95.1 157.0 2.4 10.9 -20.2 89 89 A P S S- 0 0 132 0, 0.0 -1,-0.1 0, 0.0 3,-0.0 -0.440 88.2 -55.1 -75.1 70.6 5.1 10.6 -22.9 90 90 A S S S- 0 0 107 -2,-2.6 2,-0.1 1,-0.1 -3,-0.0 0.870 76.6 -83.8 57.1 108.8 4.2 14.0 -24.5 91 91 A S 0 0 136 -3,-0.2 -1,-0.1 1,-0.2 0, 0.0 -0.173 360.0 360.0 -43.6 103.5 0.6 14.2 -25.4 92 92 A G 0 0 128 -2,-0.1 -1,-0.2 -3,-0.0 -2,-0.0 0.832 360.0 360.0 -47.9 360.0 0.7 12.5 -28.8