==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 15-MAY-05 1X57 . COMPND 2 MOLECULE: ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR N.NAMEKI,M.SATO,N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA, . 91 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6711.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 47 51.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 31 34.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 103 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 119.3 -5.8 -18.3 5.3 2 2 A S + 0 0 117 2,-0.0 2,-0.3 39,-0.0 0, 0.0 -0.350 360.0 156.8 -61.2 138.8 -6.8 -19.4 1.7 3 3 A S + 0 0 39 -2,-0.0 2,-0.3 41,-0.0 38,-0.1 -0.935 18.0 88.2-152.3 174.6 -7.2 -16.6 -0.9 4 4 A G + 0 0 39 -2,-0.3 -2,-0.0 1,-0.2 0, 0.0 -0.971 13.8 151.7 135.0-149.3 -7.0 -16.3 -4.7 5 5 A S + 0 0 111 -2,-0.3 2,-0.4 1,-0.2 -1,-0.2 0.973 24.6 159.7 76.6 72.7 -9.7 -16.7 -7.4 6 6 A S + 0 0 103 2,-0.0 -1,-0.2 42,-0.0 2,-0.1 -0.996 6.9 142.1-122.4 118.7 -8.4 -14.4 -10.2 7 7 A G S S- 0 0 63 -2,-0.4 0, 0.0 0, 0.0 0, 0.0 -0.509 73.9 -49.4-164.7 79.6 -9.8 -15.1 -13.7 8 8 A D S S+ 0 0 170 1,-0.2 2,-0.3 -2,-0.1 -2,-0.0 0.957 80.6 134.3 50.3 93.1 -10.6 -12.0 -15.8 9 9 A R - 0 0 91 0, 0.0 -1,-0.2 0, 0.0 2,-0.1 -0.868 57.4 -84.0-142.6 176.7 -12.6 -9.3 -14.0 10 10 A V - 0 0 120 -2,-0.3 2,-0.4 39,-0.0 0, 0.0 -0.449 33.9-151.8 -77.9 160.9 -12.3 -5.5 -13.6 11 11 A T - 0 0 46 -2,-0.1 38,-0.2 38,-0.0 37,-0.2 -0.985 15.7-129.4-133.5 121.6 -10.0 -3.9 -11.0 12 12 A L > - 0 0 80 36,-0.7 4,-2.8 -2,-0.4 5,-0.1 -0.238 33.4-102.3 -59.2 162.5 -10.9 -0.5 -9.5 13 13 A E H > S+ 0 0 90 1,-0.2 4,-3.1 2,-0.2 5,-0.2 0.846 126.2 55.6 -61.1 -33.2 -8.0 2.1 -9.5 14 14 A V H > S+ 0 0 23 2,-0.2 4,-2.8 1,-0.2 -1,-0.2 0.970 109.6 45.6 -57.5 -54.7 -7.6 1.4 -5.8 15 15 A G H > S+ 0 0 1 31,-0.3 4,-2.6 2,-0.2 -2,-0.2 0.903 114.8 48.1 -57.4 -44.2 -7.2 -2.4 -6.6 16 16 A K H X S+ 0 0 95 -4,-2.8 4,-3.2 2,-0.2 5,-0.2 0.966 113.6 45.3 -59.7 -56.9 -4.8 -1.5 -9.4 17 17 A V H X S+ 0 0 8 -4,-3.1 4,-2.8 1,-0.2 5,-0.3 0.857 112.7 53.7 -58.8 -36.1 -2.6 0.9 -7.3 18 18 A I H X S+ 0 0 1 -4,-2.8 4,-2.6 -5,-0.2 -1,-0.2 0.975 114.5 39.6 -57.3 -59.2 -2.7 -1.7 -4.5 19 19 A Q H X S+ 0 0 76 -4,-2.6 4,-3.0 1,-0.2 -2,-0.2 0.895 118.0 49.1 -57.1 -48.3 -1.3 -4.4 -6.8 20 20 A Q H X S+ 0 0 90 -4,-3.2 4,-2.1 2,-0.2 -1,-0.2 0.902 114.3 43.3 -62.9 -46.4 1.1 -2.0 -8.5 21 21 A G H < S+ 0 0 2 -4,-2.8 4,-0.4 -5,-0.2 6,-0.2 0.872 115.0 51.3 -71.4 -35.7 2.5 -0.6 -5.3 22 22 A R H ><>S+ 0 0 29 -4,-2.6 5,-2.3 -5,-0.3 3,-2.1 0.980 113.2 43.7 -54.8 -61.6 2.7 -4.1 -3.8 23 23 A Q H ><5S+ 0 0 126 -4,-3.0 3,-1.4 1,-0.3 -2,-0.2 0.796 104.6 63.4 -62.4 -30.8 4.6 -5.5 -6.9 24 24 A S T 3<5S+ 0 0 89 -4,-2.1 -1,-0.3 1,-0.3 -2,-0.2 0.673 116.5 32.0 -63.9 -16.9 6.9 -2.4 -7.0 25 25 A K T < 5S- 0 0 116 -3,-2.1 -1,-0.3 -4,-0.4 -2,-0.2 0.043 112.1-115.7-124.2 11.4 8.1 -3.6 -3.5 26 26 A G T < 5 + 0 0 62 -3,-1.4 2,-0.5 1,-0.2 -3,-0.2 0.611 61.0 158.6 60.3 14.0 7.7 -7.4 -4.1 27 27 A L < - 0 0 30 -5,-2.3 -1,-0.2 -6,-0.2 -2,-0.1 -0.573 33.6-142.3 -78.4 119.9 5.0 -7.4 -1.3 28 28 A T > - 0 0 66 -2,-0.5 4,-2.0 -3,-0.1 5,-0.1 -0.206 29.1-105.3 -64.7 168.9 2.6 -10.3 -1.4 29 29 A Q H > S+ 0 0 42 1,-0.2 4,-2.6 2,-0.2 5,-0.1 0.872 126.4 51.5 -62.9 -34.5 -1.1 -9.7 -0.5 30 30 A K H > S+ 0 0 96 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.849 106.8 52.4 -73.9 -33.0 -0.4 -11.4 2.8 31 31 A D H > S+ 0 0 78 2,-0.2 4,-2.5 1,-0.2 -2,-0.2 0.888 111.7 48.2 -63.6 -39.4 2.6 -9.1 3.4 32 32 A L H X S+ 0 0 1 -4,-2.0 4,-1.4 2,-0.2 -2,-0.2 0.965 109.3 50.4 -64.9 -52.8 0.2 -6.2 2.7 33 33 A A H X>S+ 0 0 3 -4,-2.6 5,-2.5 1,-0.2 4,-0.6 0.873 112.2 49.8 -51.9 -43.2 -2.4 -7.5 5.1 34 34 A T H ><5S+ 0 0 103 -4,-2.0 3,-1.4 1,-0.2 -1,-0.2 0.956 107.1 53.4 -60.1 -52.4 0.3 -7.9 7.7 35 35 A K H 3<5S+ 0 0 123 -4,-2.5 -1,-0.2 1,-0.3 -2,-0.2 0.702 119.3 35.3 -57.2 -25.3 1.6 -4.3 7.1 36 36 A I H 3<5S- 0 0 1 -4,-1.4 -1,-0.3 -3,-0.4 -2,-0.2 0.339 109.1-118.8-113.8 5.2 -2.0 -2.9 7.8 37 37 A N T <<5S+ 0 0 141 -3,-1.4 -3,-0.2 -4,-0.6 2,-0.2 0.947 74.4 117.8 54.5 54.9 -3.0 -5.5 10.5 38 38 A E S - 0 0 144 -2,-0.2 4,-1.0 1,-0.1 3,-0.2 -0.689 27.6-130.5 -81.0 149.7 -7.0 -10.1 6.7 40 40 A P H > S+ 0 0 28 0, 0.0 4,-1.6 0, 0.0 -1,-0.1 0.617 106.6 72.4 -72.5 -11.5 -5.4 -11.2 3.4 41 41 A Q H > S+ 0 0 98 2,-0.2 4,-1.4 1,-0.2 3,-0.2 0.970 95.5 46.2 -59.5 -57.9 -9.1 -11.8 2.4 42 42 A V H > S+ 0 0 41 1,-0.2 4,-3.0 2,-0.2 3,-0.3 0.859 109.4 55.2 -63.9 -33.3 -9.9 -8.0 2.3 43 43 A I H X S+ 0 0 0 -4,-1.0 4,-2.0 1,-0.2 -1,-0.2 0.929 107.5 50.0 -60.5 -46.5 -6.7 -7.3 0.2 44 44 A A H X S+ 0 0 8 -4,-1.6 4,-0.6 -3,-0.2 -1,-0.2 0.775 115.6 43.2 -62.1 -28.9 -7.8 -9.9 -2.4 45 45 A D H X>S+ 0 0 54 -4,-1.4 5,-2.4 -3,-0.3 4,-2.4 0.847 109.0 56.8 -85.2 -38.5 -11.3 -8.3 -2.5 46 46 A Y H <5S+ 0 0 10 -4,-3.0 -31,-0.3 3,-0.2 -34,-0.2 0.854 100.7 60.9 -55.0 -41.0 -9.8 -4.7 -2.6 47 47 A E H <5S+ 0 0 18 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.871 112.9 34.6 -58.7 -42.9 -7.9 -5.7 -5.7 48 48 A S H <5S- 0 0 8 -4,-0.6 -36,-0.7 -3,-0.4 -1,-0.2 0.853 116.2-113.0 -75.4 -35.3 -11.1 -6.4 -7.6 49 49 A G T <5S+ 0 0 31 -4,-2.4 -3,-0.2 -38,-0.2 -2,-0.1 0.801 83.2 118.7 93.8 46.3 -13.0 -3.6 -5.9 50 50 A R < + 0 0 168 -5,-2.4 -4,-0.2 -8,-0.2 2,-0.2 0.270 52.7 75.2-128.4 -0.3 -15.4 -5.9 -3.9 51 51 A A S S- 0 0 24 -6,-0.5 -9,-0.0 -9,-0.1 -8,-0.0 -0.558 97.6 -97.3 -89.5 175.8 -14.6 -5.1 -0.3 52 52 A I - 0 0 151 -2,-0.2 2,-0.6 2,-0.0 -6,-0.1 -0.886 37.1-140.1 -93.8 112.7 -15.9 -1.7 1.1 53 53 A P - 0 0 69 0, 0.0 2,-0.4 0, 0.0 -39,-0.0 -0.609 23.7-172.0 -77.5 115.5 -12.9 0.7 0.8 54 54 A N > - 0 0 89 -2,-0.6 4,-3.0 1,-0.1 3,-0.4 -0.904 32.4-123.5-113.8 142.5 -12.9 2.9 4.0 55 55 A N H > S+ 0 0 99 -2,-0.4 4,-2.0 1,-0.2 -1,-0.1 0.730 110.7 57.8 -58.2 -26.2 -10.6 5.9 4.5 56 56 A Q H > S+ 0 0 141 2,-0.2 4,-1.7 3,-0.1 -1,-0.2 0.969 114.1 35.2 -62.9 -57.6 -9.1 4.3 7.6 57 57 A V H > S+ 0 0 21 -3,-0.4 4,-2.6 2,-0.2 -2,-0.2 0.934 116.1 55.5 -68.7 -43.8 -7.9 1.2 5.8 58 58 A L H X S+ 0 0 12 -4,-3.0 4,-2.1 1,-0.2 -1,-0.2 0.911 106.5 53.2 -49.5 -46.8 -7.1 3.2 2.6 59 59 A G H X S+ 0 0 18 -4,-2.0 4,-1.4 -5,-0.2 -1,-0.2 0.885 109.1 47.5 -58.0 -43.2 -4.9 5.4 4.9 60 60 A K H X S+ 0 0 61 -4,-1.7 4,-1.8 1,-0.2 -1,-0.2 0.923 110.0 53.2 -61.8 -45.7 -3.1 2.2 6.2 61 61 A I H X S+ 0 0 1 -4,-2.6 4,-1.4 2,-0.2 5,-0.3 0.838 100.9 61.2 -61.5 -33.7 -2.6 1.0 2.6 62 62 A E H >X>S+ 0 0 37 -4,-2.1 4,-2.7 1,-0.2 5,-0.8 0.969 107.1 44.1 -56.8 -51.3 -1.0 4.4 1.7 63 63 A R H 3<5S+ 0 0 214 -4,-1.4 -1,-0.2 1,-0.2 -2,-0.2 0.895 106.6 65.2 -54.1 -42.0 1.8 3.7 4.2 64 64 A A H 3<5S+ 0 0 2 -4,-1.8 -1,-0.2 1,-0.2 -2,-0.2 0.789 122.1 12.8 -54.0 -42.2 2.0 0.1 2.9 65 65 A I H <<5S- 0 0 11 -4,-1.4 -1,-0.2 -3,-0.7 -2,-0.2 0.557 100.5-117.4-114.7 -16.9 3.2 1.0 -0.6 66 66 A G T <5S+ 0 0 21 -4,-2.7 12,-1.9 -5,-0.3 2,-0.3 0.704 79.1 104.4 81.6 25.2 4.1 4.7 -0.1 67 67 A L B S- 0 0 53 -2,-0.3 3,-1.1 1,-0.1 0, 0.0 -0.078 97.0 -81.1 85.4 167.8 -8.2 11.2 -5.7 72 72 A K T 3 S+ 0 0 200 1,-0.2 -1,-0.1 -2,-0.1 0, 0.0 0.619 129.2 78.2 -71.4 -9.8 -7.3 11.0 -9.4 73 73 A D T > + 0 0 103 -3,-0.1 3,-2.1 2,-0.1 -5,-0.3 0.242 68.5 141.0 -75.1 8.2 -3.9 11.6 -7.9 74 74 A I T < + 0 0 31 -3,-1.1 -5,-0.2 1,-0.3 -3,-0.1 -0.277 63.8 28.4 -52.5 141.5 -4.0 7.9 -6.9 75 75 A G T 3 S+ 0 0 8 -7,-2.6 -1,-0.3 1,-0.4 -6,-0.1 0.345 88.6 126.7 77.3 -4.6 -0.5 6.3 -7.3 76 76 A K < - 0 0 121 -3,-2.1 -8,-3.1 1,-0.1 -1,-0.4 -0.581 69.4-103.7 -66.3 146.8 1.2 9.6 -6.6 77 77 A P B -A 67 0A 37 0, 0.0 2,-0.7 0, 0.0 -10,-0.3 -0.257 23.7-114.6 -70.4 162.1 3.7 9.1 -3.8 78 78 A I S S- 0 0 46 -12,-1.9 2,-2.0 2,-0.4 -11,-0.0 -0.906 82.7 -43.0-101.2 109.8 3.2 10.2 -0.2 79 79 A E S S+ 0 0 204 -2,-0.7 2,-0.3 2,-0.0 -12,-0.0 -0.457 135.6 15.3 70.5 -72.2 5.8 13.0 0.5 80 80 A K S S+ 0 0 193 -2,-2.0 -2,-0.4 -14,-0.0 0, 0.0 -0.977 81.4 111.4-129.1 142.8 8.7 11.1 -1.2 81 81 A G - 0 0 41 -2,-0.3 -15,-0.1 -4,-0.2 -14,-0.0 -0.835 62.6 -73.5 167.6 166.3 8.6 8.1 -3.6 82 82 A P - 0 0 106 0, 0.0 2,-0.0 0, 0.0 -2,-0.0 -0.200 55.3 -91.3 -71.5 166.1 9.3 7.3 -7.3 83 83 A R - 0 0 245 -7,-0.1 2,-0.3 -6,-0.0 -7,-0.1 -0.300 37.4-166.0 -65.7 163.2 7.0 8.3 -10.2 84 84 A A - 0 0 52 -7,-0.0 2,-0.1 -2,-0.0 -1,-0.0 -0.952 20.3-114.4-141.6 161.3 4.2 6.2 -11.6 85 85 A K - 0 0 194 -2,-0.3 2,-0.2 1,-0.1 0, 0.0 -0.213 29.2-151.8 -78.3 176.5 2.2 6.4 -14.9 86 86 A S + 0 0 106 -2,-0.1 -1,-0.1 -11,-0.0 -13,-0.1 -0.722 15.2 173.1-136.7-172.3 -1.6 7.1 -14.9 87 87 A G - 0 0 61 -2,-0.2 0, 0.0 0, 0.0 0, 0.0 -0.926 33.2 -83.4 174.9 170.2 -4.7 6.3 -17.2 88 88 A P - 0 0 134 0, 0.0 2,-0.2 0, 0.0 0, 0.0 -0.057 31.3-148.4 -77.0-175.6 -8.5 6.6 -17.4 89 89 A S - 0 0 87 -77,-0.0 2,-0.3 -76,-0.0 -77,-0.0 -0.524 7.3-151.9-123.9-165.1 -11.2 4.3 -15.9 90 90 A S 0 0 122 -2,-0.2 0, 0.0 0, 0.0 0, 0.0 -0.897 360.0 360.0-152.1-173.5 -14.7 3.4 -17.1 91 91 A G 0 0 120 -2,-0.3 -2,-0.0 0, 0.0 0, 0.0 -0.919 360.0 360.0-157.5 360.0 -17.9 2.3 -15.5