==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 17-MAY-05 1X6B . COMPND 2 MOLECULE: RHO GUANINE EXCHANGE FACTOR (GEF) 16; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.SATO,K.SAITO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 79 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6125.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 51.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 29.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 11.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 135 0, 0.0 2,-0.2 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0-128.9 -23.2 -9.0 8.3 2 2 A S - 0 0 118 1,-0.4 0, 0.0 0, 0.0 0, 0.0 -0.619 360.0 -49.3-144.3 78.7 -19.8 -7.4 7.9 3 3 A S - 0 0 125 -2,-0.2 -1,-0.4 2,-0.0 0, 0.0 0.621 67.8-105.8 63.1 134.0 -19.8 -3.7 8.7 4 4 A G + 0 0 65 -3,-0.1 2,-0.3 2,-0.0 0, 0.0 -0.067 38.1 178.0 -79.0-175.9 -22.4 -1.4 7.1 5 5 A S - 0 0 133 2,-0.0 2,-0.1 0, 0.0 -2,-0.0 -0.938 22.8-159.8-179.5 161.8 -21.9 1.1 4.4 6 6 A S + 0 0 126 -2,-0.3 2,-0.2 2,-0.1 3,-0.0 -0.556 59.7 56.0-159.6 85.1 -23.7 3.6 2.2 7 7 A G S S- 0 0 70 -2,-0.1 2,-0.2 0, 0.0 -2,-0.0 -0.828 89.2 -17.7-174.2-147.5 -22.0 4.6 -1.1 8 8 A W - 0 0 224 -2,-0.2 -2,-0.1 1,-0.1 0, 0.0 -0.503 56.7-120.3 -81.6 152.0 -20.5 3.3 -4.3 9 9 A Q - 0 0 178 -2,-0.2 -1,-0.1 1,-0.1 -3,-0.0 0.929 58.9 -96.6 -55.7 -49.7 -19.6 -0.4 -4.5 10 10 A G - 0 0 51 -3,-0.0 -2,-0.1 1,-0.0 -1,-0.1 -0.279 34.6-153.2 165.9 -66.8 -16.0 0.4 -5.2 11 11 A L + 0 0 127 1,-0.2 2,-0.3 0, 0.0 -3,-0.0 0.986 38.9 145.1 61.2 83.6 -15.1 0.4 -8.9 12 12 A S - 0 0 95 2,-0.1 2,-0.6 0, 0.0 -1,-0.2 -0.988 48.0-122.7-149.6 152.8 -11.4 -0.4 -8.9 13 13 A S + 0 0 114 -2,-0.3 2,-0.3 2,-0.0 0, 0.0 -0.883 54.5 116.9-102.8 121.0 -9.0 -2.4 -11.0 14 14 A K + 0 0 147 -2,-0.6 -2,-0.1 3,-0.0 31,-0.0 -0.961 17.0 154.9-172.0 162.0 -7.1 -5.2 -9.3 15 15 A G S S- 0 0 57 -2,-0.3 -1,-0.0 0, 0.0 -2,-0.0 0.077 83.1 -8.8-154.7 -84.3 -6.5 -8.9 -9.3 16 16 A D S S+ 0 0 171 2,-0.0 3,-0.1 3,-0.0 -2,-0.0 -0.082 83.3 158.8-121.9 30.0 -3.3 -10.5 -8.0 17 17 A L - 0 0 67 1,-0.1 2,-0.2 26,-0.0 28,-0.1 -0.047 50.5 -88.6 -51.3 158.3 -1.4 -7.3 -7.6 18 18 A P - 0 0 25 0, 0.0 26,-2.5 0, 0.0 2,-0.4 -0.488 43.4-161.2 -74.9 141.7 1.5 -7.3 -5.2 19 19 A Q E -AB 43 74A 68 55,-0.6 54,-1.8 24,-0.2 55,-0.7 -0.971 6.2-167.3-127.6 141.0 0.9 -6.6 -1.5 20 20 A V E -AB 42 72A 1 22,-1.3 22,-1.1 -2,-0.4 2,-0.6 -0.979 19.1-131.4-129.3 140.7 3.2 -5.5 1.2 21 21 A E E -AB 41 71A 87 50,-1.5 2,-0.6 -2,-0.4 50,-0.6 -0.823 24.4-126.6 -95.1 117.7 2.7 -5.4 5.0 22 22 A I E -A 40 0A 0 18,-0.8 17,-4.2 -2,-0.6 18,-0.8 -0.492 19.8-166.9 -65.0 110.1 3.8 -2.1 6.6 23 23 A T S S+ 0 0 52 -2,-0.6 2,-0.3 15,-0.2 -1,-0.2 0.870 75.1 14.4 -65.9 -38.4 6.1 -3.2 9.4 24 24 A K S S- 0 0 102 45,-0.4 -1,-0.2 14,-0.2 12,-0.1 -0.978 97.6 -84.4-139.3 150.3 6.0 0.3 10.8 25 25 A A - 0 0 24 -2,-0.3 2,-0.4 -3,-0.1 12,-0.3 -0.101 35.5-150.1 -49.7 149.1 3.8 3.3 10.4 26 26 A F - 0 0 9 10,-1.7 10,-0.5 -4,-0.0 2,-0.2 -0.729 6.4-153.0-130.0 82.3 4.8 5.5 7.4 27 27 A F - 0 0 158 -2,-0.4 2,-0.3 8,-0.2 8,-0.1 -0.365 19.6-130.2 -57.8 119.1 3.8 9.1 8.1 28 28 A A + 0 0 32 -2,-0.2 7,-0.1 1,-0.2 -1,-0.1 -0.571 31.8 172.4 -75.7 131.5 3.3 10.8 4.8 29 29 A K + 0 0 161 -2,-0.3 -1,-0.2 5,-0.1 2,-0.0 0.712 62.7 57.5-106.8 -35.0 5.2 14.1 4.4 30 30 A Q S S- 0 0 114 1,-0.1 -2,-0.0 4,-0.0 0, 0.0 -0.148 90.9-110.3 -86.6-174.8 4.5 14.7 0.7 31 31 A A S S+ 0 0 110 1,-0.1 -1,-0.1 -2,-0.0 -3,-0.0 0.473 119.5 46.8 -95.0 -6.1 1.2 15.1 -1.1 32 32 A D S S+ 0 0 82 31,-0.1 32,-1.7 2,-0.0 2,-0.1 0.662 94.0 91.1-104.1 -26.7 1.8 11.8 -2.8 33 33 A E B -c 64 0A 23 30,-0.3 2,-0.4 20,-0.0 32,-0.1 -0.447 66.1-147.4 -72.8 144.0 2.9 9.8 0.2 34 34 A V - 0 0 0 30,-1.0 2,-0.4 -2,-0.1 -5,-0.1 -0.897 16.2-115.6-115.8 144.2 0.2 8.0 2.2 35 35 A T - 0 0 51 -2,-0.4 2,-0.3 -8,-0.1 -8,-0.2 -0.635 36.9-176.9 -80.4 129.5 0.1 7.4 5.9 36 36 A L - 0 0 0 -10,-0.5 -10,-1.7 -2,-0.4 2,-0.2 -0.857 13.3-140.1-124.8 159.8 0.3 3.8 6.9 37 37 A Q > - 0 0 94 -2,-0.3 3,-0.8 -12,-0.3 2,-0.4 -0.557 38.9 -73.1-111.6 177.3 0.2 1.9 10.2 38 38 A Q T 3 S+ 0 0 139 1,-0.3 -15,-0.2 -2,-0.2 -14,-0.2 -0.589 117.6 8.7 -75.6 126.2 2.0 -1.0 11.8 39 39 A A T 3 S+ 0 0 58 -17,-4.2 -1,-0.3 -2,-0.4 -16,-0.2 0.936 97.7 149.6 70.1 48.6 1.0 -4.3 10.3 40 40 A D E < -A 22 0A 20 -18,-0.8 -18,-0.8 -3,-0.8 2,-0.4 -0.475 41.9-125.6-104.8 177.7 -1.1 -2.7 7.5 41 41 A V E +A 21 0A 55 -20,-0.2 16,-1.2 -2,-0.2 17,-0.6 -0.995 23.0 178.9-131.0 133.6 -1.9 -3.7 4.0 42 42 A V E -AD 20 56A 0 -22,-1.1 -22,-1.3 -2,-0.4 2,-0.8 -0.997 25.4-134.2-137.6 130.3 -1.4 -1.8 0.8 43 43 A L E -AD 19 55A 8 12,-2.8 12,-2.5 -2,-0.4 -24,-0.2 -0.752 28.8-129.9 -86.8 109.6 -2.1 -2.8 -2.7 44 44 A V E + D 0 54A 3 -26,-2.5 10,-0.4 -2,-0.8 3,-0.1 -0.293 35.1 167.0 -58.6 139.4 0.9 -2.0 -4.9 45 45 A L E + 0 0 59 8,-3.8 2,-0.4 1,-0.3 9,-0.2 0.634 68.5 20.0-122.0 -41.2 -0.1 -0.1 -8.0 46 46 A Q E - D 0 53A 118 7,-1.3 7,-3.8 2,-0.0 2,-0.7 -0.960 65.1-153.5-140.3 118.6 3.2 1.2 -9.3 47 47 A Q E + D 0 52A 114 -2,-0.4 2,-0.5 5,-0.2 5,-0.2 -0.827 17.9 178.1 -95.3 113.2 6.6 -0.2 -8.4 48 48 A E E > - D 0 51A 107 3,-2.3 3,-3.4 -2,-0.7 -2,-0.0 -0.959 42.1-105.9-120.2 115.3 9.3 2.4 -8.7 49 49 A D T 3 S+ 0 0 172 -2,-0.5 3,-0.1 1,-0.3 -2,-0.0 -0.098 114.0 19.0 -38.7 102.3 12.9 1.5 -7.8 50 50 A G T 3 S+ 0 0 50 0, 0.0 2,-0.4 0, 0.0 17,-0.3 -0.272 128.9 42.9 125.6 -44.8 13.1 3.3 -4.5 51 51 A W E < -D 48 0A 94 -3,-3.4 -3,-2.3 15,-0.2 2,-0.6 -0.986 67.0-147.1-135.1 143.7 9.4 3.8 -3.7 52 52 A L E -DE 47 65A 8 13,-2.4 13,-2.3 -2,-0.4 2,-0.3 -0.953 14.6-151.7-116.0 116.2 6.5 1.4 -4.1 53 53 A Y E +DE 46 64A 41 -7,-3.8 -8,-3.8 -2,-0.6 -7,-1.3 -0.638 32.1 134.7 -87.7 142.7 3.1 2.9 -5.0 54 54 A G E -DE 44 63A 0 9,-2.1 9,-1.3 -10,-0.4 2,-0.5 -0.911 49.7 -96.5-164.4-172.6 -0.1 1.2 -3.9 55 55 A E E -DE 43 62A 33 -12,-2.5 -12,-2.8 -2,-0.3 2,-0.3 -0.976 33.0-123.2-130.0 118.2 -3.5 1.7 -2.4 56 56 A R E > -D 42 0A 25 5,-3.5 4,-2.1 -2,-0.5 3,-0.3 -0.416 12.4-154.6 -60.7 117.1 -4.2 1.2 1.3 57 57 A L T 4 S+ 0 0 72 -16,-1.2 -1,-0.2 -2,-0.3 -15,-0.1 0.695 86.3 78.6 -65.7 -18.6 -7.0 -1.4 1.5 58 58 A R T 4 S- 0 0 189 -17,-0.6 -1,-0.2 1,-0.1 -16,-0.1 0.973 128.7 -16.8 -52.3 -65.7 -7.8 0.2 4.9 59 59 A D T 4 S- 0 0 125 -3,-0.3 -2,-0.2 2,-0.1 -1,-0.1 0.603 97.7-103.9-114.0 -26.0 -9.6 3.2 3.4 60 60 A G < + 0 0 22 -4,-2.1 -3,-0.2 1,-0.3 2,-0.1 0.464 59.6 164.9 110.8 8.9 -8.4 2.9 -0.2 61 61 A E - 0 0 79 -5,-0.3 -5,-3.5 -6,-0.1 2,-0.6 -0.387 25.4-150.3 -61.2 127.8 -5.9 5.8 0.1 62 62 A T E + E 0 55A 57 -7,-0.3 2,-0.2 -2,-0.1 -7,-0.2 -0.911 37.4 128.5-107.9 113.3 -3.5 5.7 -2.9 63 63 A G E - E 0 54A 0 -9,-1.3 -9,-2.1 -2,-0.6 2,-0.4 -0.809 59.4 -75.8-146.5-174.6 -0.0 7.1 -2.2 64 64 A W E -cE 33 53A 42 -32,-1.7 -30,-1.0 -2,-0.2 -11,-0.2 -0.799 44.7-178.3 -95.6 132.5 3.7 6.3 -2.4 65 65 A F E - E 0 52A 0 -13,-2.3 -13,-2.4 -2,-0.4 2,-0.1 -0.997 21.4-129.4-136.5 130.8 5.1 3.9 0.1 66 66 A P > - 0 0 12 0, 0.0 3,-0.6 0, 0.0 -15,-0.2 -0.384 13.3-133.7 -75.1 153.5 8.7 2.8 0.6 67 67 A E G > S+ 0 0 96 -17,-0.3 3,-3.7 1,-0.2 -16,-0.1 0.842 102.7 71.3 -73.8 -35.6 9.6 -0.9 0.8 68 68 A D G 3 S+ 0 0 122 1,-0.3 -1,-0.2 3,-0.1 -17,-0.0 0.740 102.2 47.8 -52.0 -22.6 11.8 -0.3 3.8 69 69 A F G < S+ 0 0 56 -3,-0.6 -45,-0.4 -46,-0.1 -1,-0.3 0.020 118.5 42.7-107.1 24.3 8.5 0.3 5.6 70 70 A A < - 0 0 10 -3,-3.7 2,-0.4 -48,-0.3 -48,-0.2 -0.958 69.7-131.8-158.2 169.0 6.9 -2.8 4.2 71 71 A R E -B 21 0A 188 -50,-0.6 -50,-1.5 -2,-0.3 2,-0.4 -0.937 27.7-121.5-136.8 111.4 7.6 -6.5 3.5 72 72 A F E -B 20 0A 58 -2,-0.4 -52,-0.2 -52,-0.2 3,-0.2 -0.311 26.1-170.1 -53.0 106.0 6.8 -8.1 0.2 73 73 A I E - 0 0 103 -54,-1.8 2,-0.3 -2,-0.4 -1,-0.2 0.985 69.6 -16.0 -63.0 -60.9 4.4 -10.8 1.2 74 74 A S E S+B 19 0A 94 -55,-0.7 -55,-0.6 -3,-0.1 -1,-0.3 -0.926 95.9 91.5-153.1 123.0 4.3 -12.6 -2.2 75 75 A G S S+ 0 0 42 -2,-0.3 2,-2.8 -3,-0.2 -2,-0.0 0.010 72.0 61.5-167.1 -72.0 5.4 -11.3 -5.6 76 76 A P S S- 0 0 106 0, 0.0 -4,-0.0 0, 0.0 0, 0.0 -0.359 77.3-174.2 -75.0 62.0 9.0 -12.0 -6.6 77 77 A S - 0 0 100 -2,-2.8 -3,-0.0 1,-0.1 0, 0.0 0.087 22.6-142.4 -50.1 170.3 8.4 -15.7 -6.5 78 78 A S 0 0 131 1,-0.0 -1,-0.1 0, 0.0 0, 0.0 0.833 360.0 360.0-103.0 -58.4 11.4 -18.0 -7.1 79 79 A G 0 0 121 0, 0.0 -2,-0.1 0, 0.0 -1,-0.0 -0.239 360.0 360.0 -48.6 360.0 10.0 -20.9 -9.1