==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 14-AUG-04 1X7K . COMPND 2 MOLECULE: POLYPHEMUSIN I; . SOURCE 2 SYNTHETIC: YES; . AUTHOR J.P.POWERS,A.TAN,A.RAMAMOORTHY,R.E.HANCOCK . 19 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2785.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 8 42.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 15.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 5.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 5.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 5.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R 0 0 284 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 155.5 -7.2 -6.0 12.0 2 2 A R + 0 0 218 3,-0.0 2,-0.2 0, 0.0 3,-0.1 -0.671 360.0 149.9 -94.5 150.1 -6.4 -6.1 8.3 3 3 A W - 0 0 186 1,-0.6 15,-0.0 -2,-0.3 0, 0.0 -0.573 58.1 -19.5-178.9 110.0 -9.0 -7.0 5.6 4 4 A a - 0 0 43 15,-0.2 -1,-0.6 -2,-0.2 2,-0.4 0.483 66.1-126.0 61.1 142.7 -9.4 -5.8 2.0 5 5 A F - 0 0 151 12,-1.8 2,-0.5 -3,-0.1 -1,-0.1 -0.976 20.4-168.3-127.4 126.8 -7.6 -2.6 0.9 6 6 A R - 0 0 153 -2,-0.4 2,-0.6 10,-0.2 10,-0.2 -0.937 14.8-141.3-116.2 131.4 -9.3 0.4 -0.8 7 7 A V E -A 15 0A 99 8,-0.7 8,-1.7 -2,-0.5 2,-0.2 -0.768 19.3-159.5 -91.6 122.5 -7.4 3.3 -2.4 8 8 A b E -A 14 0A 62 -2,-0.6 2,-0.7 6,-0.3 6,-0.3 -0.570 16.1-126.0 -96.3 163.6 -9.0 6.7 -1.8 9 9 A Y S S- 0 0 146 3,-1.8 3,-0.2 4,-1.1 5,-0.1 -0.811 79.1 -38.4-112.6 96.1 -8.4 9.8 -3.9 10 10 A R S S- 0 0 218 -2,-0.7 -1,-0.2 1,-0.3 3,-0.1 0.986 122.1 -43.2 55.6 61.9 -7.3 12.8 -1.7 11 11 A G S S+ 0 0 84 1,-0.1 2,-0.3 -3,-0.1 -1,-0.3 0.737 138.2 69.3 58.3 17.4 -9.6 11.9 1.2 12 12 A R S S+ 0 0 138 1,-0.3 -3,-1.8 -3,-0.2 -1,-0.1 -0.992 76.0 37.3-161.0 153.2 -12.2 11.3 -1.5 13 13 A F - 0 0 125 -2,-0.3 -4,-1.1 -5,-0.2 2,-0.3 0.907 64.8-170.2 67.3 96.2 -13.1 8.8 -4.3 14 14 A b E -A 8 0A 47 -6,-0.3 2,-0.4 -3,-0.1 -6,-0.3 -0.866 22.4-150.4-119.6 154.7 -12.1 5.3 -3.2 15 15 A Y E -A 7 0A 114 -8,-1.7 -8,-0.7 -2,-0.3 -10,-0.1 -0.653 20.6-152.6-122.8 76.5 -11.9 2.0 -5.0 16 16 A R + 0 0 210 -2,-0.4 2,-0.2 -10,-0.2 -10,-0.2 -0.006 19.0 176.5 -43.0 153.1 -12.6 -0.8 -2.5 17 17 A K - 0 0 147 2,-0.0 -12,-1.8 0, 0.0 2,-0.4 -0.667 11.2-172.3-167.6 106.5 -11.0 -4.1 -3.4 18 18 A a 0 0 92 -14,-0.2 -12,-0.0 -2,-0.2 -2,-0.0 -0.849 360.0 360.0-105.7 138.1 -11.0 -7.4 -1.4 19 19 A R 0 0 268 -2,-0.4 -15,-0.2 0, 0.0 -2,-0.0 -0.961 360.0 360.0-161.0 360.0 -8.9 -10.4 -2.4