==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 19-AUG-04 1X93 . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN HP0222; . SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; . AUTHOR A.POPESCU,A.KARPAY,D.ISRAEL,R.M.PEEK JR.,A.M.KREZEL . 86 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6603.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 68 79.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 9.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 45 52.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 31 A T 0 0 145 0, 0.0 2,-1.3 0, 0.0 52,-0.2 0.000 360.0 360.0 360.0 152.6 -7.4 12.1 -13.7 2 32 A R E -A 52 0A 72 50,-2.5 50,-1.9 2,-0.0 48,-0.1 -0.642 360.0-161.7 -97.0 77.9 -6.2 10.4 -10.5 3 33 A A E -A 51 0A 64 -2,-1.3 2,-0.3 48,-0.2 48,-0.2 -0.337 8.9-174.2 -56.7 139.5 -2.4 10.7 -10.6 4 34 A V E -A 50 0A 14 46,-2.4 46,-3.1 -2,-0.0 2,-0.4 -0.911 2.1-174.0-145.0 110.1 -0.3 8.4 -8.3 5 35 A S E -A 49 0A 71 -2,-0.3 44,-0.3 44,-0.3 2,-0.2 -0.931 13.3-178.0-114.8 123.6 3.5 8.8 -8.0 6 36 A L E -A 48 0A 20 42,-2.2 42,-2.5 -2,-0.4 2,-0.7 -0.802 29.7-117.2-134.3 164.9 5.5 6.2 -6.0 7 37 A Y E +A 47 0A 156 -2,-0.2 40,-0.2 40,-0.2 2,-0.1 -0.848 43.1 159.5-119.9 89.4 9.0 5.3 -4.8 8 38 A F E -A 46 0A 6 38,-1.9 38,-2.6 -2,-0.7 2,-0.3 -0.291 28.2-124.6 -96.6-177.7 10.3 2.0 -6.1 9 39 A S > - 0 0 60 36,-0.2 4,-2.4 -2,-0.1 5,-0.2 -0.886 33.4 -91.2-138.6 167.3 13.8 0.3 -6.6 10 40 A D H > S+ 0 0 103 -2,-0.3 4,-3.1 1,-0.2 5,-0.2 0.840 120.6 44.0 -48.9 -52.6 15.8 -1.3 -9.4 11 41 A E H > S+ 0 0 117 2,-0.2 4,-2.6 1,-0.2 -1,-0.2 0.925 114.4 49.4 -55.4 -53.2 14.7 -4.9 -9.0 12 42 A Q H > S+ 0 0 64 1,-0.2 4,-0.9 2,-0.2 -1,-0.2 0.862 117.0 42.9 -59.7 -37.5 11.0 -4.0 -8.5 13 43 A Y H X S+ 0 0 37 -4,-2.4 4,-2.4 2,-0.2 3,-0.3 0.937 114.0 49.5 -69.2 -49.9 11.2 -1.8 -11.7 14 44 A Q H X S+ 0 0 68 -4,-3.1 4,-2.6 1,-0.2 -2,-0.2 0.822 105.6 56.9 -66.7 -33.6 13.2 -4.3 -13.8 15 45 A K H X S+ 0 0 41 -4,-2.6 4,-1.3 -5,-0.2 -1,-0.2 0.886 111.8 43.6 -62.6 -37.6 10.8 -7.2 -13.0 16 46 A L H X S+ 0 0 2 -4,-0.9 4,-2.5 -3,-0.3 -2,-0.2 0.876 113.3 51.3 -75.6 -34.6 8.0 -5.0 -14.4 17 47 A E H X S+ 0 0 88 -4,-2.4 4,-2.1 2,-0.2 -2,-0.2 0.901 107.5 53.2 -64.0 -40.3 10.2 -4.0 -17.4 18 48 A K H X S+ 0 0 150 -4,-2.6 4,-0.5 2,-0.2 -2,-0.2 0.881 112.0 45.2 -64.5 -37.5 11.0 -7.7 -18.1 19 49 A M H >X S+ 0 0 25 -4,-1.3 3,-1.3 2,-0.2 4,-1.0 0.922 109.5 55.8 -67.9 -43.7 7.2 -8.4 -18.2 20 50 A A H 3<>S+ 0 0 0 -4,-2.5 5,-2.5 1,-0.3 3,-0.5 0.859 97.0 62.9 -60.0 -34.9 6.6 -5.3 -20.4 21 51 A N H 3<5S+ 0 0 122 -4,-2.1 3,-0.3 3,-0.3 -1,-0.3 0.773 96.8 59.2 -62.2 -23.6 9.2 -6.7 -23.0 22 52 A E H <<5S+ 0 0 153 -3,-1.3 -1,-0.2 -4,-0.5 -2,-0.2 0.889 108.3 44.0 -65.9 -39.2 6.6 -9.6 -23.4 23 53 A E T <5S- 0 0 73 -4,-1.0 -2,-0.2 -3,-0.5 -1,-0.2 0.451 131.0-103.7 -78.5 -4.9 4.1 -6.9 -24.4 24 54 A E T 5S- 0 0 170 -4,-0.4 -3,-0.3 -3,-0.3 -2,-0.1 0.796 82.1 -36.4 76.8 39.0 6.9 -5.4 -26.6 25 55 A E S > + 0 0 28 -9,-0.1 4,-2.2 0, 0.0 3,-1.3 -0.080 23.6 173.2-155.1 27.2 4.8 -0.8 -22.1 27 57 A V T 34 S+ 0 0 46 1,-0.2 2,-0.2 2,-0.2 -10,-0.1 -0.227 70.9 24.5 -54.9 131.1 6.6 -0.1 -18.7 28 58 A G T 3> S+ 0 0 23 1,-0.0 4,-1.2 20,-0.0 -1,-0.2 -0.396 121.9 57.4 101.0 -46.2 4.4 2.1 -16.5 29 59 A S H <> S+ 0 0 65 -3,-1.3 4,-3.0 -2,-0.2 -2,-0.2 0.908 99.7 56.4 -78.7 -41.0 1.2 0.9 -18.2 30 60 A Y H X S+ 0 0 30 -4,-2.2 4,-2.3 1,-0.2 5,-0.2 0.887 104.3 56.8 -56.1 -38.5 1.9 -2.8 -17.5 31 61 A I H > S+ 0 0 4 -5,-0.2 4,-1.5 2,-0.2 -1,-0.2 0.958 111.4 39.7 -55.4 -56.6 2.0 -1.8 -13.8 32 62 A K H X S+ 0 0 51 -4,-1.2 4,-2.7 1,-0.2 5,-0.2 0.940 113.2 56.2 -63.1 -44.9 -1.5 -0.3 -13.8 33 63 A R H X S+ 0 0 154 -4,-3.0 4,-2.4 1,-0.2 -1,-0.2 0.858 105.1 52.4 -55.6 -38.1 -2.8 -3.1 -16.1 34 64 A Y H X S+ 0 0 50 -4,-2.3 4,-2.2 2,-0.2 -1,-0.2 0.906 111.8 45.1 -68.2 -40.0 -1.6 -5.8 -13.5 35 65 A I H X S+ 0 0 1 -4,-1.5 4,-2.0 2,-0.2 -2,-0.2 0.901 113.8 49.8 -67.1 -40.3 -3.5 -4.0 -10.6 36 66 A L H X S+ 0 0 52 -4,-2.7 4,-0.6 2,-0.2 -2,-0.2 0.871 110.5 50.7 -71.0 -34.2 -6.6 -3.6 -12.9 37 67 A K H >< S+ 0 0 120 -4,-2.4 3,-0.8 -5,-0.2 4,-0.2 0.929 112.6 46.2 -63.4 -46.3 -6.3 -7.3 -13.8 38 68 A A H >< S+ 0 0 27 -4,-2.2 3,-1.9 1,-0.2 -2,-0.2 0.834 101.0 67.9 -66.6 -31.5 -6.2 -8.2 -10.0 39 69 A L H 3< S+ 0 0 24 -4,-2.0 3,-0.5 1,-0.3 -1,-0.2 0.723 87.3 67.7 -65.8 -22.8 -9.1 -5.8 -9.2 40 70 A R T << S+ 0 0 227 -3,-0.8 -1,-0.3 -4,-0.6 -2,-0.2 0.720 123.3 10.6 -62.5 -25.0 -11.5 -8.1 -11.1 41 71 A K < + 0 0 191 -3,-1.9 -1,-0.2 -4,-0.2 -2,-0.2 -0.233 69.9 155.2-157.8 50.1 -11.0 -10.8 -8.3 42 72 A I 0 0 66 -3,-0.5 -3,-0.1 1,-0.2 -2,-0.1 0.866 360.0 360.0 -48.2 -45.5 -9.1 -9.3 -5.2 43 73 A E 0 0 238 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.966 360.0 360.0 -74.2 360.0 -10.7 -12.0 -2.9 44 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 45 31 B T 0 0 148 0, 0.0 2,-0.3 0, 0.0 -36,-0.2 0.000 360.0 360.0 360.0 155.6 15.3 5.9 -5.8 46 32 B R E -A 8 0A 99 -38,-2.6 -38,-1.9 2,-0.0 2,-0.5 -0.742 360.0-129.3-105.3 156.6 13.1 4.8 -8.8 47 33 B A E -A 7 0A 63 -2,-0.3 2,-0.6 -40,-0.2 -40,-0.2 -0.901 21.1-180.0-124.9 111.4 9.9 6.6 -10.0 48 34 B V E +A 6 0A 3 -42,-2.5 -42,-2.2 -2,-0.5 2,-0.5 -0.884 9.7 177.7-118.6 92.7 6.5 5.0 -10.7 49 35 B S E +A 5 0A 66 -2,-0.6 -44,-0.3 -44,-0.3 2,-0.2 -0.911 7.3 175.8-104.2 120.3 3.9 7.5 -11.8 50 36 B L E -A 4 0A 7 -46,-3.1 -46,-2.4 -2,-0.5 2,-0.3 -0.686 27.4-138.8-120.2 169.9 0.4 6.1 -12.7 51 37 B Y E +A 3 0A 140 -48,-0.2 -48,-0.2 -2,-0.2 2,-0.1 -0.767 31.5 166.7-140.7 77.3 -3.0 7.6 -13.8 52 38 B F E -A 2 0A 3 -50,-1.9 -50,-2.5 -2,-0.3 2,-0.2 -0.231 23.2-135.8 -74.5 178.5 -6.0 5.8 -12.1 53 39 B S > - 0 0 62 -52,-0.2 4,-2.7 -2,-0.1 5,-0.2 -0.772 38.6 -79.5-131.3 178.2 -9.6 7.0 -12.0 54 40 B D H > S+ 0 0 96 -2,-0.2 4,-2.9 1,-0.2 5,-0.3 0.858 125.3 48.4 -50.1 -47.8 -12.3 7.1 -9.2 55 41 B E H > S+ 0 0 146 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.940 115.5 44.2 -59.2 -51.2 -13.3 3.3 -9.3 56 42 B Q H > S+ 0 0 56 2,-0.2 4,-1.9 1,-0.2 -2,-0.2 0.915 116.8 46.2 -59.1 -46.4 -9.7 2.1 -9.2 57 43 B Y H X S+ 0 0 53 -4,-2.7 4,-2.4 2,-0.2 -2,-0.2 0.916 114.5 46.1 -69.6 -41.2 -8.7 4.6 -6.5 58 44 B Q H X S+ 0 0 68 -4,-2.9 4,-2.3 -5,-0.2 -1,-0.2 0.862 109.9 53.8 -71.5 -34.8 -11.7 3.9 -4.3 59 45 B K H X S+ 0 0 94 -4,-2.3 4,-1.1 -5,-0.3 -2,-0.2 0.903 111.3 46.6 -65.9 -37.0 -11.3 0.1 -4.7 60 46 B L H X S+ 0 0 2 -4,-1.9 4,-2.8 -5,-0.2 3,-0.4 0.925 110.9 53.2 -62.4 -44.3 -7.7 0.6 -3.5 61 47 B E H X S+ 0 0 80 -4,-2.4 4,-2.7 1,-0.2 -2,-0.2 0.856 101.8 59.2 -59.6 -35.6 -9.1 2.8 -0.6 62 48 B K H X S+ 0 0 163 -4,-2.3 4,-0.5 2,-0.2 -1,-0.2 0.880 112.8 38.4 -63.7 -37.5 -11.5 0.0 0.4 63 49 B M H >X S+ 0 0 24 -4,-1.1 4,-1.1 -3,-0.4 3,-0.8 0.899 113.9 55.7 -74.8 -42.9 -8.5 -2.3 1.0 64 50 B A H ><>S+ 0 0 0 -4,-2.8 5,-2.3 1,-0.2 3,-0.6 0.886 100.4 58.7 -59.9 -39.1 -6.4 0.6 2.5 65 51 B N H 3<5S+ 0 0 122 -4,-2.7 3,-0.4 3,-0.3 -1,-0.2 0.815 101.8 55.1 -61.6 -29.1 -9.1 1.3 5.2 66 52 B E H <<5S+ 0 0 174 -3,-0.8 -1,-0.2 -4,-0.5 -2,-0.2 0.805 108.6 47.6 -70.3 -30.0 -8.7 -2.3 6.4 67 53 B E T <<5S- 0 0 92 -4,-1.1 -2,-0.2 -3,-0.6 -1,-0.2 0.467 131.8-102.4 -82.2 -7.2 -4.9 -1.5 6.8 68 54 B E T 5S- 0 0 178 -4,-0.5 -3,-0.3 -3,-0.4 -2,-0.1 0.774 80.3 -41.8 85.0 38.5 -6.1 1.7 8.6 69 55 B E S > + 0 0 33 -9,-0.1 4,-2.3 2,-0.0 3,-1.0 0.166 14.2 156.3-171.1 17.5 -2.3 3.6 3.4 71 57 B V H 3> S+ 0 0 16 1,-0.3 4,-2.5 2,-0.2 5,-0.2 0.740 74.5 46.5 -42.9 -48.6 -3.5 3.9 -0.3 72 58 B G H 3> S+ 0 0 26 1,-0.2 4,-1.5 2,-0.2 -1,-0.3 0.921 119.5 42.0 -61.4 -41.5 -0.1 5.0 -1.9 73 59 B S H <> S+ 0 0 80 -3,-1.0 4,-3.2 2,-0.2 -1,-0.2 0.857 111.1 57.0 -70.3 -34.9 1.8 2.3 -0.0 74 60 B Y H X S+ 0 0 40 -4,-2.3 4,-2.5 2,-0.2 -2,-0.2 0.915 104.1 52.8 -62.4 -40.9 -1.1 -0.2 -0.7 75 61 B I H X S+ 0 0 4 -4,-2.5 4,-1.5 -5,-0.2 -2,-0.2 0.939 114.8 41.4 -59.2 -46.5 -0.6 0.4 -4.5 76 62 B K H X S+ 0 0 65 -4,-1.5 4,-2.5 1,-0.2 -2,-0.2 0.953 113.2 53.6 -66.3 -48.5 3.1 -0.4 -4.1 77 63 B R H X S+ 0 0 113 -4,-3.2 4,-2.4 2,-0.2 -2,-0.2 0.853 107.6 51.4 -51.6 -41.2 2.4 -3.3 -1.7 78 64 B Y H X S+ 0 0 33 -4,-2.5 4,-2.3 2,-0.2 -1,-0.2 0.902 110.5 47.5 -72.0 -38.9 0.0 -5.0 -4.2 79 65 B I H X S+ 0 0 2 -4,-1.5 4,-2.2 2,-0.2 -2,-0.2 0.922 113.9 48.0 -61.6 -44.5 2.6 -4.8 -7.0 80 66 B L H X S+ 0 0 56 -4,-2.5 4,-1.1 2,-0.2 -2,-0.2 0.882 110.4 51.9 -69.7 -34.4 5.2 -6.2 -4.7 81 67 B K H < S+ 0 0 109 -4,-2.4 4,-0.3 -5,-0.2 3,-0.2 0.902 112.1 45.8 -66.2 -41.0 2.8 -9.0 -3.6 82 68 B A H >X S+ 0 0 19 -4,-2.3 4,-2.0 1,-0.2 3,-1.9 0.867 103.4 64.9 -65.9 -35.9 2.2 -9.8 -7.4 83 69 B L H 3X S+ 0 0 13 -4,-2.2 4,-2.2 1,-0.3 -2,-0.2 0.840 90.3 65.2 -61.8 -32.0 6.0 -9.7 -8.0 84 70 B R H 3< S+ 0 0 207 -4,-1.1 -1,-0.3 -3,-0.2 -2,-0.2 0.678 111.3 36.0 -62.4 -21.7 6.5 -12.8 -5.7 85 71 B K H <4 S+ 0 0 183 -3,-1.9 -2,-0.2 -4,-0.3 -1,-0.2 0.722 112.9 58.4 -97.6 -33.1 4.4 -14.8 -8.3 86 72 B I H < 0 0 45 -4,-2.0 -2,-0.2 0, 0.0 -3,-0.2 0.839 360.0 360.0 -64.3 -36.1 5.8 -13.0 -11.4 87 73 B E < 0 0 149 -4,-2.2 -3,-0.2 -5,-0.2 -4,-0.1 0.359 360.0 360.0-143.9 360.0 9.5 -14.0 -10.5